RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 H7C1W4 665 aa22.85■■□□□ 1.25
PNN-202ENST00000553331 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
PNN-202ENST00000553331 USP50Q70EL3 339 aaPredicted RBP22.85■■□□□ 1.25
PNN-202ENST00000553331 CDC5LQ99459 802 aaKnown RBP22.85■■□□□ 1.25
PNN-202ENST00000553331 ZC3H12CQ9C0D7 883 aaKnown RBP22.85■■□□□ 1.25
PNN-202ENST00000553331 ADARB2Q9NS39 739 aaKnown RBP22.85■■□□□ 1.25
PNN-202ENST00000553331 GGA1Q9UJY5 639 aa22.85■■□□□ 1.25
PNN-202ENST00000553331 ECE2O60344 883 aa22.84■■□□□ 1.25
PNN-202ENST00000553331 JMYQ8N9B5 988 aa22.84■■□□□ 1.25
PNN-202ENST00000553331 TMEM88BA6NKF7 163 aa22.83■■□□□ 1.25
PNN-202ENST00000553331 LINS1Q8NG48 757 aa22.83■■□□□ 1.25
PNN-202ENST00000553331 PODXL2Q9NZ53 605 aa22.83■■□□□ 1.25
PNN-202ENST00000553331 ZBTB12Q9Y330 459 aaPredicted RBP22.83■■□□□ 1.25
PNN-202ENST00000553331 CCER2I3L3R5 266 aa22.82■■□□□ 1.24
PNN-202ENST00000553331 PSMD14O00487 310 aa22.82■■□□□ 1.24
PNN-202ENST00000553331 KCNQ5Q9NR82 932 aa22.82■■□□□ 1.24
PNN-202ENST00000553331 SHTN1A0MZ66 631 aa22.81■■□□□ 1.24
PNN-202ENST00000553331 CNOT7Q9UIV1 285 aaKnown RBP22.81■■□□□ 1.24
PNN-202ENST00000553331 XDHP47989 1333 aa22.81■■□□□ 1.24
PNN-202ENST00000553331 ZNF521Q96K83 1311 aa22.81■■□□□ 1.24
PNN-202ENST00000553331 FMR1Q06787 632 aaKnown RBP eCLIP22.8■■□□□ 1.24
PNN-202ENST00000553331 H7C1D1 291 aa22.79■■□□□ 1.24
PNN-202ENST00000553331 IGHMBP2P38935 993 aaKnown RBP22.79■■□□□ 1.24
PNN-202ENST00000553331 CASP7P55210 303 aa22.79■■□□□ 1.24
PNN-202ENST00000553331 FAM161AQ3B820 660 aa22.79■■□□□ 1.24
PNN-202ENST00000553331 SLC4A10Q6U841 1118 aa22.79■■□□□ 1.24
PNN-202ENST00000553331 MICALL2Q8IY33 904 aa22.79■■□□□ 1.24
PNN-202ENST00000553331 TRAF5O00463 557 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 ITGA6P23229 1130 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 ATP2B4P23634 1241 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 BEND3Q5T5X7 828 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 TRPM4Q8TD43 1214 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 BSDC1Q9NW68 430 aaPredicted RBP22.78■■□□□ 1.24
PNN-202ENST00000553331 ABT1Q9ULW3 272 aaKnown RBP22.78■■□□□ 1.24
PNN-202ENST00000553331 MINPP1Q9UNW1 487 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 CHMP3Q9Y3E7 222 aa22.78■■□□□ 1.24
PNN-202ENST00000553331 RTL9Q8NET4 1388 aa22.77■■□□□ 1.24
PNN-202ENST00000553331 WTIPA6NIX2 430 aaPredicted RBP22.77■■□□□ 1.24
PNN-202ENST00000553331 PLA2G12BQ9BX93 195 aa22.77■■□□□ 1.24
PNN-202ENST00000553331 SCN9AQ15858 1988 aa22.76■■□□□ 1.23
PNN-202ENST00000553331 HIRAP54198 1017 aaPredicted RBP22.76■■□□□ 1.23
PNN-202ENST00000553331 RBM26Q5T8P6 1007 aaKnown RBP22.76■■□□□ 1.23
PNN-202ENST00000553331 CNTNAP1P78357 1384 aa22.76■■□□□ 1.23
PNN-202ENST00000553331 E9PSI1 815 aa22.75■■□□□ 1.23
PNN-202ENST00000553331 SAMD7Q7Z3H4 446 aa22.75■■□□□ 1.23
PNN-202ENST00000553331 MIER1Q8N108 512 aa22.75■■□□□ 1.23
PNN-202ENST00000553331 MPHOSPH8Q99549 860 aa22.75■■□□□ 1.23
PNN-202ENST00000553331 CSF1RP07333 972 aa22.74■■□□□ 1.23
PNN-202ENST00000553331 HSPA1AP0DMV8 641 aaKnown RBP22.74■■□□□ 1.23
PNN-202ENST00000553331 HSPA1BP0DMV9 641 aaKnown RBP22.74■■□□□ 1.23
PNN-202ENST00000553331 TBC1D10BQ4KMP7 808 aaPredicted RBP22.74■■□□□ 1.23
PNN-202ENST00000553331 DPF2Q92785 391 aa22.74■■□□□ 1.23
PNN-202ENST00000553331 GLIS2Q9BZE0 524 aaPredicted RBP22.74■■□□□ 1.23
PNN-202ENST00000553331 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
PNN-202ENST00000553331 TRPM7Q96QT4 1865 aa22.74■■□□□ 1.23
PNN-202ENST00000553331 ANKRD18BA2A2Z9 1011 aa22.73■■□□□ 1.23
PNN-202ENST00000553331 CCT4P50991 539 aaKnown RBP22.73■■□□□ 1.23
PNN-202ENST00000553331 VIL1P09327 827 aaKnown RBP22.72■■□□□ 1.23
PNN-202ENST00000553331 RPS12P25398 132 aaKnown RBP22.72■■□□□ 1.23
PNN-202ENST00000553331 VEGFBP49765 207 aa22.72■■□□□ 1.23
PNN-202ENST00000553331 FOXO4P98177 505 aa22.72■■□□□ 1.23
PNN-202ENST00000553331 DEFB115Q30KQ5 88 aa22.72■■□□□ 1.23
PNN-202ENST00000553331 PAXIP1Q6ZW49 1069 aaPredicted RBP22.72■■□□□ 1.23
PNN-202ENST00000553331 FBXW7Q969H0 707 aa22.72■■□□□ 1.23
PNN-202ENST00000553331 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
PNN-202ENST00000553331 SRCIN1Q9C0H9 1055 aa22.72■■□□□ 1.23
PNN-202ENST00000553331 GRM8O00222 908 aa22.71■■□□□ 1.23
PNN-202ENST00000553331 SLFN5Q08AF3 891 aa22.71■■□□□ 1.23
PNN-202ENST00000553331 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
PNN-202ENST00000553331 ZNF408Q9H9D4 720 aa22.71■■□□□ 1.23
PNN-202ENST00000553331 EGFRP00533 1210 aa22.7■■□□□ 1.22
PNN-202ENST00000553331 KCNJ4P48050 445 aa22.7■■□□□ 1.22
PNN-202ENST00000553331 IFIT5Q13325 482 aaKnown RBP22.7■■□□□ 1.22
PNN-202ENST00000553331 CST9Q5W186 159 aa22.7■■□□□ 1.22
PNN-202ENST00000553331 LMBR1LQ6UX01 489 aa22.7■■□□□ 1.22
PNN-202ENST00000553331 ZC3H15Q8WU90 426 aaKnown RBP22.7■■□□□ 1.22
PNN-202ENST00000553331 ANKRD2Q9GZV1 360 aa22.7■■□□□ 1.22
PNN-202ENST00000553331 MED23Q9ULK4 1368 aa22.69■■□□□ 1.22
PNN-202ENST00000553331 ALDH1L1O75891 902 aa22.69■■□□□ 1.22
PNN-202ENST00000553331 CELF2O95319 508 aaKnown RBP22.69■■□□□ 1.22
PNN-202ENST00000553331 GRM1Q13255 1194 aa22.69■■□□□ 1.22
PNN-202ENST00000553331 EPHA10Q5JZY3 1008 aa22.69■■□□□ 1.22
PNN-202ENST00000553331 USP48Q86UV5 1035 aa22.69■■□□□ 1.22
PNN-202ENST00000553331 PGAP2Q9UHJ9 254 aa22.69■■□□□ 1.22
PNN-202ENST00000553331 POLR2AP24928 1970 aaKnown RBP22.69■■□□□ 1.22
PNN-202ENST00000553331 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 RASSF10A6NK89 507 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 CHRNDQ07001 517 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 TAF7LQ5H9L4 462 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 RSBN1LQ6PCB5 846 aaPredicted RBP22.68■■□□□ 1.22
PNN-202ENST00000553331 CDC37L1Q7L3B6 337 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 PODNQ7Z5L7 613 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 SSH1Q8WYL5 1049 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 LEMD3Q9Y2U8 911 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 PSME4Q14997 1843 aa22.68■■□□□ 1.22
PNN-202ENST00000553331 KIF4BQ2VIQ3 1234 aa22.67■■□□□ 1.22
PNN-202ENST00000553331 DLK2Q6UY11 383 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms