RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 A0A0C4DFX4 3053 aa16.7■□□□□ 0.26
SNRPF-204ENST00000552085 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
SNRPF-204ENST00000552085 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
SNRPF-204ENST00000552085 DOK7Q18PE1 504 aa16.69■□□□□ 0.26
SNRPF-204ENST00000552085 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
SNRPF-204ENST00000552085 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
SNRPF-204ENST00000552085 EFCC1Q9HA90 598 aa16.69■□□□□ 0.26
SNRPF-204ENST00000552085 PRAMEF18Q5VWM3 479 aa16.68■□□□□ 0.26
SNRPF-204ENST00000552085 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
SNRPF-204ENST00000552085 PRO3102Q9H379 93 aa16.68■□□□□ 0.26
SNRPF-204ENST00000552085 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
SNRPF-204ENST00000552085 INHBEP58166 350 aa16.67■□□□□ 0.26
SNRPF-204ENST00000552085 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
SNRPF-204ENST00000552085 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
SNRPF-204ENST00000552085 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
SNRPF-204ENST00000552085 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
SNRPF-204ENST00000552085 KNSTRNQ9Y448 316 aa16.67■□□□□ 0.26
SNRPF-204ENST00000552085 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
SNRPF-204ENST00000552085 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
SNRPF-204ENST00000552085 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
SNRPF-204ENST00000552085 NF2P35240 595 aa16.66■□□□□ 0.26
SNRPF-204ENST00000552085 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
SNRPF-204ENST00000552085 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
SNRPF-204ENST00000552085 DPF3Q92784 378 aa16.66■□□□□ 0.26
SNRPF-204ENST00000552085 EYA3Q99504 573 aa16.66■□□□□ 0.26
SNRPF-204ENST00000552085 MYL6BP14649 208 aa16.65■□□□□ 0.26
SNRPF-204ENST00000552085 AGBL3Q8NEM8 1001 aa16.65■□□□□ 0.26
SNRPF-204ENST00000552085 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
SNRPF-204ENST00000552085 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
SNRPF-204ENST00000552085 MYOZ2Q9NPC6 264 aa16.65■□□□□ 0.26
SNRPF-204ENST00000552085 POLLQ9UGP5 575 aa16.65■□□□□ 0.26
SNRPF-204ENST00000552085 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
SNRPF-204ENST00000552085 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
SNRPF-204ENST00000552085 MCM10Q7L590 875 aa16.64■□□□□ 0.25
SNRPF-204ENST00000552085 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
SNRPF-204ENST00000552085 PHACTR3Q96KR7 559 aa16.64■□□□□ 0.25
SNRPF-204ENST00000552085 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
SNRPF-204ENST00000552085 IGF2BP3O00425 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNRPF-204ENST00000552085 SOX1O00570 391 aaPredicted RBP16.63■□□□□ 0.25
SNRPF-204ENST00000552085 RSBN1LQ6PCB5 846 aaPredicted RBP16.63■□□□□ 0.25
SNRPF-204ENST00000552085 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
SNRPF-204ENST00000552085 A0A1W2PPC1 479 aa16.62■□□□□ 0.25
SNRPF-204ENST00000552085 GPSM2P81274 684 aa16.62■□□□□ 0.25
SNRPF-204ENST00000552085 CAP1Q01518 475 aa16.62■□□□□ 0.25
SNRPF-204ENST00000552085 SP3Q02447 781 aa16.62■□□□□ 0.25
SNRPF-204ENST00000552085 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
SNRPF-204ENST00000552085 LRCH3Q96II8 777 aa16.62■□□□□ 0.25
SNRPF-204ENST00000552085 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
SNRPF-204ENST00000552085 RANBP2P49792 3224 aaKnown RBP16.61■□□□□ 0.25
SNRPF-204ENST00000552085 WTIPA6NIX2 430 aaPredicted RBP16.61■□□□□ 0.25
SNRPF-204ENST00000552085 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
SNRPF-204ENST00000552085 CRHR2Q13324 411 aa16.61■□□□□ 0.25
SNRPF-204ENST00000552085 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
SNRPF-204ENST00000552085 PTCH2Q9Y6C5 1203 aa16.61■□□□□ 0.25
SNRPF-204ENST00000552085 G3V3G9 751 aa16.6■□□□□ 0.25
SNRPF-204ENST00000552085 MYCP01106 439 aaPredicted RBP16.6■□□□□ 0.25
SNRPF-204ENST00000552085 PRKG1Q13976 671 aa16.6■□□□□ 0.25
SNRPF-204ENST00000552085 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
SNRPF-204ENST00000552085 GMLQ99445 158 aa16.6■□□□□ 0.25
SNRPF-204ENST00000552085 ZC3H12CQ9C0D7 883 aaKnown RBP16.6■□□□□ 0.25
SNRPF-204ENST00000552085 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
SNRPF-204ENST00000552085 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
SNRPF-204ENST00000552085 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
SNRPF-204ENST00000552085 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
SNRPF-204ENST00000552085 ARHGEF6Q15052 776 aa16.58■□□□□ 0.24
SNRPF-204ENST00000552085 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
SNRPF-204ENST00000552085 NBPF9Q3BBW0 867 aa16.58■□□□□ 0.24
SNRPF-204ENST00000552085 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
SNRPF-204ENST00000552085 CELF1Q92879 486 aaKnown RBP16.58■□□□□ 0.24
SNRPF-204ENST00000552085 SLC10A4Q96EP9 437 aa16.58■□□□□ 0.24
SNRPF-204ENST00000552085 MIS18AQ9NYP9 233 aa16.58■□□□□ 0.24
SNRPF-204ENST00000552085 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
SNRPF-204ENST00000552085 COL4A1P02462 1669 aa16.57■□□□□ 0.24
SNRPF-204ENST00000552085 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
SNRPF-204ENST00000552085 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
SNRPF-204ENST00000552085 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
SNRPF-204ENST00000552085 STXBP5LQ9Y2K9 1186 aa16.57■□□□□ 0.24
SNRPF-204ENST00000552085 NLRP10Q86W26 655 aa16.56■□□□□ 0.24
SNRPF-204ENST00000552085 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
SNRPF-204ENST00000552085 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
SNRPF-204ENST00000552085 NR2E3Q9Y5X4 410 aa16.56■□□□□ 0.24
SNRPF-204ENST00000552085 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
SNRPF-204ENST00000552085 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
SNRPF-204ENST00000552085 SH3TC2Q8TF17 1288 aa16.55■□□□□ 0.24
SNRPF-204ENST00000552085 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
SNRPF-204ENST00000552085 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
SNRPF-204ENST00000552085 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.55■□□□□ 0.24
SNRPF-204ENST00000552085 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
SNRPF-204ENST00000552085 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
SNRPF-204ENST00000552085 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
SNRPF-204ENST00000552085 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
SNRPF-204ENST00000552085 WNT10BO00744 389 aa16.53■□□□□ 0.24
SNRPF-204ENST00000552085 HSP90AB3PQ58FF7 597 aa16.53■□□□□ 0.24
SNRPF-204ENST00000552085 DEFB123Q8N688 67 aa16.53■□□□□ 0.24
SNRPF-204ENST00000552085 FZD1Q9UP38 647 aa16.53■□□□□ 0.24
SNRPF-204ENST00000552085 USP17L3A6NCW0 530 aa16.52■□□□□ 0.24
SNRPF-204ENST00000552085 USP17L4A6NCW7 530 aa16.52■□□□□ 0.24
SNRPF-204ENST00000552085 UFL1O94874 794 aa16.52■□□□□ 0.24
SNRPF-204ENST00000552085 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.24
SNRPF-204ENST00000552085 MAP3K11Q16584 847 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms