RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TTLL11Q8NHH1 800 aa21.86■■□□□ 1.09
CDK4-208ENST00000551706 RTL9Q8NET4 1388 aa21.86■■□□□ 1.09
CDK4-208ENST00000551706 RPS8P62241 208 aaKnown RBP21.85■■□□□ 1.09
CDK4-208ENST00000551706 FKBP4Q02790 459 aaKnown RBP eCLIP21.85■■□□□ 1.09
CDK4-208ENST00000551706 MAP1SQ66K74 1059 aaPredicted RBP21.85■■□□□ 1.09
CDK4-208ENST00000551706 BEGAINQ9BUH8 593 aa21.85■■□□□ 1.09
CDK4-208ENST00000551706 UTYO14607 1347 aa21.84■■□□□ 1.09
CDK4-208ENST00000551706 OLFM4Q6UX06 510 aa21.84■■□□□ 1.09
CDK4-208ENST00000551706 FRAT1Q92837 279 aaPredicted RBP21.84■■□□□ 1.09
CDK4-208ENST00000551706 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
CDK4-208ENST00000551706 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
CDK4-208ENST00000551706 PSMD1Q99460 953 aa21.84■■□□□ 1.09
CDK4-208ENST00000551706 ZNF541Q9H0D2 1346 aa21.83■■□□□ 1.09
CDK4-208ENST00000551706 ATF7IPQ6VMQ6 1270 aa21.83■■□□□ 1.09
CDK4-208ENST00000551706 CCDC85AQ96PX6 553 aaPredicted RBP21.83■■□□□ 1.09
CDK4-208ENST00000551706 SNED1Q8TER0 1413 aa21.82■■□□□ 1.08
CDK4-208ENST00000551706 CSF1RP07333 972 aa21.82■■□□□ 1.08
CDK4-208ENST00000551706 ZKSCAN2Q63HK3 967 aa21.82■■□□□ 1.08
CDK4-208ENST00000551706 GREM2Q9H772 168 aa21.82■■□□□ 1.08
CDK4-208ENST00000551706 SEC31BQ9NQW1 1179 aa21.82■■□□□ 1.08
CDK4-208ENST00000551706 THSD7BQ9C0I4 1608 aa21.81■■□□□ 1.08
CDK4-208ENST00000551706 TRIM27P14373 513 aa21.81■■□□□ 1.08
CDK4-208ENST00000551706 ANKRD18AQ8IVF6 992 aa21.81■■□□□ 1.08
CDK4-208ENST00000551706 NBPF7P0C2Y1 421 aaPredicted RBP21.8■■□□□ 1.08
CDK4-208ENST00000551706 ECE1P42892 770 aa21.8■■□□□ 1.08
CDK4-208ENST00000551706 FOXO4P98177 505 aa21.8■■□□□ 1.08
CDK4-208ENST00000551706 INTS3Q68E01 1043 aaKnown RBP21.8■■□□□ 1.08
CDK4-208ENST00000551706 CAPNS2Q96L46 248 aa21.8■■□□□ 1.08
CDK4-208ENST00000551706 USP44Q9H0E7 712 aa21.8■■□□□ 1.08
CDK4-208ENST00000551706 DPP8Q6V1X1 898 aaPredicted RBP21.79■■□□□ 1.08
CDK4-208ENST00000551706 PAXIP1Q6ZW49 1069 aaPredicted RBP21.79■■□□□ 1.08
CDK4-208ENST00000551706 MPNDQ8N594 471 aa21.79■■□□□ 1.08
CDK4-208ENST00000551706 SUPT20HQ8NEM7 779 aa21.79■■□□□ 1.08
CDK4-208ENST00000551706 ZNF277Q9NRM2 450 aaPredicted RBP21.79■■□□□ 1.08
CDK4-208ENST00000551706 ITGA6P23229 1130 aa21.78■■□□□ 1.08
CDK4-208ENST00000551706 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
CDK4-208ENST00000551706 GPR101Q96P66 508 aaPredicted RBP21.78■■□□□ 1.08
CDK4-208ENST00000551706 VPS33BQ9H267 617 aa21.78■■□□□ 1.08
CDK4-208ENST00000551706 HDAC5Q9UQL6 1122 aa21.78■■□□□ 1.08
CDK4-208ENST00000551706 MYH3P11055 1940 aa21.77■■□□□ 1.08
CDK4-208ENST00000551706 ANKRD18BA2A2Z9 1011 aa21.77■■□□□ 1.08
CDK4-208ENST00000551706 IGHMBP2P38935 993 aaKnown RBP21.77■■□□□ 1.08
CDK4-208ENST00000551706 IARSP41252 1262 aaKnown RBP21.77■■□□□ 1.08
CDK4-208ENST00000551706 IFIT5Q13325 482 aaKnown RBP21.77■■□□□ 1.08
CDK4-208ENST00000551706 LMBR1LQ6UX01 489 aa21.77■■□□□ 1.08
CDK4-208ENST00000551706 SUCLG2Q96I99 432 aa21.77■■□□□ 1.08
CDK4-208ENST00000551706 RTFDC1Q9BY42 306 aaPredicted RBP21.77■■□□□ 1.08
CDK4-208ENST00000551706 RCAN3Q9UKA8 241 aa21.77■■□□□ 1.08
CDK4-208ENST00000551706 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
CDK4-208ENST00000551706 TNRC18O15417 2968 aaPredicted RBP21.76■■□□□ 1.07
CDK4-208ENST00000551706 GRM1Q13255 1194 aa21.76■■□□□ 1.07
CDK4-208ENST00000551706 EPHA10Q5JZY3 1008 aa21.76■■□□□ 1.07
CDK4-208ENST00000551706 GPC2Q8N158 579 aa21.76■■□□□ 1.07
CDK4-208ENST00000551706 BSDC1Q9NW68 430 aaPredicted RBP21.76■■□□□ 1.07
CDK4-208ENST00000551706 FZD9O00144 591 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 UBTFL1P0CB47 393 aaPredicted RBP21.75■■□□□ 1.07
CDK4-208ENST00000551706 CCDC57Q2TAC2 916 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 CYP4F22Q6NT55 531 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 SLC51AQ86UW1 340 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 FTSJ3Q8IY81 847 aaKnown RBP21.75■■□□□ 1.07
CDK4-208ENST00000551706 KAZALD1Q96I82 304 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 MPHOSPH8Q99549 860 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 TSKSQ9UJT2 592 aa21.75■■□□□ 1.07
CDK4-208ENST00000551706 NSFL1CQ9UNZ2 370 aaKnown RBP21.75■■□□□ 1.07
CDK4-208ENST00000551706 RABL6Q3YEC7 729 aaPredicted RBP21.74■■□□□ 1.07
CDK4-208ENST00000551706 CLUAP1Q96AJ1 413 aa21.74■■□□□ 1.07
CDK4-208ENST00000551706 MCOLN1Q9GZU1 580 aa21.74■■□□□ 1.07
CDK4-208ENST00000551706 BICC1Q9H694 974 aaKnown RBP21.74■■□□□ 1.07
CDK4-208ENST00000551706 PODXL2Q9NZ53 605 aa21.74■■□□□ 1.07
CDK4-208ENST00000551706 LRRC37AA6NMS7 1700 aa21.74■■□□□ 1.07
CDK4-208ENST00000551706 MS4A1P11836 297 aa21.73■■□□□ 1.07
CDK4-208ENST00000551706 JDP2Q8WYK2 163 aa21.73■■□□□ 1.07
CDK4-208ENST00000551706 ANKIB1Q9P2G1 1089 aa21.73■■□□□ 1.07
CDK4-208ENST00000551706 TAF1P21675 1872 aa21.73■■□□□ 1.07
CDK4-208ENST00000551706 COL4A1P02462 1669 aa21.72■■□□□ 1.07
CDK4-208ENST00000551706 GNAI3P08754 354 aa21.72■■□□□ 1.07
CDK4-208ENST00000551706 GPSM2P81274 684 aa21.72■■□□□ 1.07
CDK4-208ENST00000551706 TAF7LQ5H9L4 462 aa21.72■■□□□ 1.07
CDK4-208ENST00000551706 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
CDK4-208ENST00000551706 LARGE2Q8N3Y3 721 aa21.72■■□□□ 1.07
CDK4-208ENST00000551706 PPIP5K2O43314 1243 aa21.71■■□□□ 1.07
CDK4-208ENST00000551706 MAP2K2P36507 400 aa21.71■■□□□ 1.07
CDK4-208ENST00000551706 FMR1Q06787 632 aaKnown RBP eCLIP21.71■■□□□ 1.072e-6■□□□□ 10.3
CDK4-208ENST00000551706 EYA3Q99504 573 aa21.71■■□□□ 1.07
CDK4-208ENST00000551706 TNNQ9UQP3 1299 aa21.71■■□□□ 1.07
CDK4-208ENST00000551706 XDHP47989 1333 aa21.71■■□□□ 1.07
CDK4-208ENST00000551706 LTBP1Q14766 1721 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 C6orf229H3BNL8 230 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 KIAA2012Q0VF49 1180 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 ANKRD44Q8N8A2 993 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 MEIS3Q99687 375 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 GGA1Q9UJY5 639 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 MINPP1Q9UNW1 487 aa21.7■■□□□ 1.06
CDK4-208ENST00000551706 CA12O43570 354 aa21.69■■□□□ 1.06
CDK4-208ENST00000551706 LMOD1P29536 600 aaPredicted RBP21.69■■□□□ 1.06
CDK4-208ENST00000551706 AOC3Q16853 763 aa21.69■■□□□ 1.06
CDK4-208ENST00000551706 NIM1KQ8IY84 436 aa21.69■■□□□ 1.06
CDK4-208ENST00000551706 TBC1D16Q8TBP0 767 aa21.69■■□□□ 1.06
CDK4-208ENST00000551706 ANKRD2Q9GZV1 360 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms