RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SMPD1P17405 629 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 MPSTP25325 297 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 C11orf91Q3C1V1 193 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 NOM1Q5C9Z4 860 aaKnown RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 GNASQ5JWF2 1037 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 COX20Q5RI15 118 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 DNAJC14Q6Y2X3 702 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 ALDH16A1Q8IZ83 802 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 MEIOBQ8N635 442 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 RHBDD1Q8TEB9 315 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 HPS1Q92902 700 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 L3MBTL2Q969R5 705 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 MYO19Q96H55 970 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 FHDC1Q9C0D6 1143 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 SAP130Q9H0E3 1048 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 BCL11AQ9H165 835 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 POLMQ9NP87 494 aaPredicted RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 STIM2Q9P246 746 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 BRPF3Q9ULD4 1205 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 HCN4Q9Y3Q4 1203 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 EID1Q9Y6B2 187 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 ATRNO75882 1429 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 SETBP1Q9Y6X0 1596 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 CEP152O94986 1710 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 XRN1Q8IZH2 1706 aaKnown RBP3.66□□□□□ -1.82
CPSF6-207ENST00000551516 C1orf167Q5SNV9 1468 aa3.66□□□□□ -1.82
CPSF6-207ENST00000551516 TRPM2O94759 1503 aa3.65□□□□□ -1.82
CPSF6-207ENST00000551516 ASXL1Q8IXJ9 1541 aa3.65□□□□□ -1.82
CPSF6-207ENST00000551516 MSH6P52701 1360 aa3.65□□□□□ -1.82
CPSF6-207ENST00000551516 ANKRD30AQ9BXX3 1397 aa3.65□□□□□ -1.82
CPSF6-207ENST00000551516 ROBO2Q9HCK4 1378 aa3.65□□□□□ -1.82
CPSF6-207ENST00000551516 EML1O00423 815 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 RNF144AP50876 292 aaPredicted RBP3.65□□□□□ -1.83
CPSF6-207ENST00000551516 ARHGAP4P98171 946 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 ZNF326Q5BKZ1 582 aaKnown RBP3.65□□□□□ -1.83
CPSF6-207ENST00000551516 LINC00528Q8N1L1 170 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 TMC1Q8TDI8 760 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 AIDAQ96BJ3 306 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 ASB16Q96NS5 453 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 BCL2L13Q9BXK5 485 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 GRIP2Q9C0E4 1043 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 QTRT2Q9H974 415 aaKnown RBP3.65□□□□□ -1.83
CPSF6-207ENST00000551516 USP3Q9Y6I4 520 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 PTPN23Q9H3S7 1636 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 AFF2P51816 1311 aa3.65□□□□□ -1.83
CPSF6-207ENST00000551516 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 UNC13BO14795 1591 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 ADGRL3Q9HAR2 1447 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 RBM47A0AV96 593 aaKnown RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 SPINT1O43278 529 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 BMP2P12643 396 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 RXRBP28702 533 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 EIF1AXP47813 144 aaKnown RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 HIRAP54198 1017 aaPredicted RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 DGKZQ13574 1117 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 ECM1Q16610 540 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 HIF1AQ16665 826 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 RTN1Q16799 776 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 NBPF1Q3BBV0 1214 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 SH3PXD2AQ5TCZ1 1133 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 C1orf53Q5VUE5 145 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 ZNF772Q68DY9 489 aaPredicted RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 ZDHHC1Q8WTX9 485 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 ZNF428Q96B54 188 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 CITED4Q96RK1 184 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 ORAI2Q96SN7 254 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 INSM2Q96T92 566 aaPredicted RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 RBCK1Q9BYM8 510 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 PHACTR1Q9C0D0 580 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 LRFN2Q9ULH4 789 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 PARP3Q9Y6F1 533 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 PXDNQ92626 1479 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 CROCC2H7BZ55 1655 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 SHPRHQ149N8 1683 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 SLIT2O94813 1529 aa3.64□□□□□ -1.83
CPSF6-207ENST00000551516 SETD1AO15047 1707 aaKnown RBP3.64□□□□□ -1.83
CPSF6-207ENST00000551516 TECPR2O15040 1411 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 PTCH1Q13635 1447 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 RGS20O76081 388 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 PCSK2P16519 638 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 TATP17735 454 aaPredicted RBP3.63□□□□□ -1.83
CPSF6-207ENST00000551516 PLA2G4AP47712 749 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 RBM6P78332 1123 aaKnown RBP3.63□□□□□ -1.83
CPSF6-207ENST00000551516 PDE3BQ13370 1112 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 SCARF1Q14162 830 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 C4orf17Q53FE4 359 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 C6orf118Q5T5N4 469 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 TRIM67Q6ZTA4 783 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 NPAS4Q8IUM7 802 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 RGL4Q8IZJ4 473 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 TTC16Q8NEE8 873 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 RHPN1Q8TCX5 695 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 NEUROD4Q9HD90 331 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 FAM13BQ9NYF5 915 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 PDZRN3Q9UPQ7 1066 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 NEXMIFQ5QGS0 1516 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 UTRNP46939 3433 aa3.63□□□□□ -1.83
CPSF6-207ENST00000551516 NHSL1Q5SYE7 1610 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 SPATA31E1Q6ZUB1 1445 aa3.62□□□□□ -1.83
CPSF6-207ENST00000551516 E9PCH4 1651 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms