RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 PRPF40BQ6NWY9 871 aaKnown RBP13.65□□□□□ -0.22
DDB1-224ENST00000545894 ECHDC1Q9NTX5 307 aa13.65□□□□□ -0.22
DDB1-224ENST00000545894 C5P01031 1676 aa13.64□□□□□ -0.23
DDB1-224ENST00000545894 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
DDB1-224ENST00000545894 MTX1Q13505 466 aa13.64□□□□□ -0.23
DDB1-224ENST00000545894 C17orf53Q8N3J3 647 aaPredicted RBP13.64□□□□□ -0.23
DDB1-224ENST00000545894 GPATCH3Q96I76 525 aa13.64□□□□□ -0.23
DDB1-224ENST00000545894 TJP1Q07157 1748 aa13.64□□□□□ -0.23
DDB1-224ENST00000545894 A1BGP04217 495 aa13.64□□□□□ -0.23
DDB1-224ENST00000545894 VPS37CA5D8V6 355 aaPredicted RBP13.63□□□□□ -0.23
DDB1-224ENST00000545894 STARD3NLO95772 234 aa13.63□□□□□ -0.23
DDB1-224ENST00000545894 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
DDB1-224ENST00000545894 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
DDB1-224ENST00000545894 ZKSCAN1P17029 563 aaPredicted RBP13.63□□□□□ -0.23
DDB1-224ENST00000545894 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
DDB1-224ENST00000545894 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
DDB1-224ENST00000545894 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
DDB1-224ENST00000545894 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
DDB1-224ENST00000545894 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
DDB1-224ENST00000545894 ST3GAL1Q11201 340 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 ME3Q16798 604 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
DDB1-224ENST00000545894 ERC1Q8IUD2 1116 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
DDB1-224ENST00000545894 EVI5LQ96CN4 794 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 CCDC171Q6TFL3 1326 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 AP5Z1O43299 807 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 PDIA6Q15084 440 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 KIAA1524Q8TCG1 905 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 ARID3AQ99856 593 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 ADCY9O60503 1353 aa13.62□□□□□ -0.23
DDB1-224ENST00000545894 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
DDB1-224ENST00000545894 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 NBPF14Q5TI25 921 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
DDB1-224ENST00000545894 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 KIF3AQ9Y496 699 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 RGPD3A6NKT7 1758 aaPredicted RBP13.61□□□□□ -0.23
DDB1-224ENST00000545894 RGPD4Q7Z3J3 1758 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 ANXA1P04083 346 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 KRT85P78386 507 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 PROSER3Q2NL68 480 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 LARP1BQ659C4 914 aaKnown RBP13.61□□□□□ -0.23
DDB1-224ENST00000545894 ZNF710Q8N1W2 664 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 NECAB1Q8N987 351 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 CCDC87Q9NVE4 849 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 ZBTB1Q9Y2K1 713 aa13.61□□□□□ -0.23
DDB1-224ENST00000545894 ALDH1L1O75891 902 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 RC3H1Q5TC82 1133 aaKnown RBP13.6□□□□□ -0.23
DDB1-224ENST00000545894 CREB3L3Q68CJ9 461 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
DDB1-224ENST00000545894 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 TPCN1Q9ULQ1 816 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 RBM8AQ9Y5S9 174 aaKnown RBP13.6□□□□□ -0.23
DDB1-224ENST00000545894 ELP1O95163 1332 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 CNTNAP4Q9C0A0 1308 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 HIP1O00291 1037 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 DTNBO60941 627 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 PDCP20941 246 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 PSMA5P28066 241 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 KCNJ4P48050 445 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 SMIM5Q71RC9 77 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 TTC6Q86TZ1 520 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 FAM200AQ8TCP9 573 aa13.6□□□□□ -0.23
DDB1-224ENST00000545894 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
DDB1-224ENST00000545894 LAMB4A4D0S4 1761 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 MYL6BP14649 208 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 AACSQ86V21 672 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 TSC1Q92574 1164 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 MAP4K1Q92918 833 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 NUP62CLQ9H1M0 184 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 DBF4Q9UBU7 674 aaPredicted RBP13.59□□□□□ -0.23
DDB1-224ENST00000545894 PYCARDQ9ULZ3 195 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
DDB1-224ENST00000545894 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
DDB1-224ENST00000545894 ZNF827Q17R98 1081 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 LRP10Q7Z4F1 713 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 AMIGO3Q86WK7 504 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 SPC24Q8NBT2 197 aa13.59□□□□□ -0.23
DDB1-224ENST00000545894 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
DDB1-224ENST00000545894 PA2G4Q9UQ80 394 aaKnown RBP13.59□□□□□ -0.23
DDB1-224ENST00000545894 ANKRD1Q15327 319 aa13.58□□□□□ -0.24
DDB1-224ENST00000545894 CDC37L1Q7L3B6 337 aa13.58□□□□□ -0.24
DDB1-224ENST00000545894 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
DDB1-224ENST00000545894 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
DDB1-224ENST00000545894 MAP3K2Q9Y2U5 619 aa13.58□□□□□ -0.24
DDB1-224ENST00000545894 C4BP0C0L5 1744 aa13.58□□□□□ -0.24
DDB1-224ENST00000545894 RREB1Q92766 1687 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 SLC27A2O14975 620 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 GNPATO15228 680 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 TYRO3Q06418 890 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
DDB1-224ENST00000545894 AK7Q96M32 723 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
DDB1-224ENST00000545894 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms