RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
SCARB1-209ENST00000545305 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
SCARB1-209ENST00000545305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-209ENST00000545305 GSPT1P15170 499 aaKnown RBP16.85■□□□□ 0.29
SCARB1-209ENST00000545305 RPS8P62241 208 aaKnown RBP16.85■□□□□ 0.29
SCARB1-209ENST00000545305 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
SCARB1-209ENST00000545305 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
SCARB1-209ENST00000545305 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
SCARB1-209ENST00000545305 BSDC1Q9NW68 430 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-209ENST00000545305 TLR7Q9NYK1 1049 aaKnown RBP16.85■□□□□ 0.29
SCARB1-209ENST00000545305 A0A1B0GUL7 405 aa16.84■□□□□ 0.29
SCARB1-209ENST00000545305 PDE6BP35913 854 aa16.84■□□□□ 0.29
SCARB1-209ENST00000545305 GRAPQ13588 217 aa16.84■□□□□ 0.29
SCARB1-209ENST00000545305 PUM3Q15397 648 aaKnown RBP16.84■□□□□ 0.29
SCARB1-209ENST00000545305 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-209ENST00000545305 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
SCARB1-209ENST00000545305 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
SCARB1-209ENST00000545305 ANKRD31Q8N7Z5 1873 aa16.84■□□□□ 0.29
SCARB1-209ENST00000545305 PDE8BO95263 885 aa16.83■□□□□ 0.28
SCARB1-209ENST00000545305 C8orf34Q49A92 452 aa16.83■□□□□ 0.28
SCARB1-209ENST00000545305 GORABQ5T7V8 394 aa16.83■□□□□ 0.28
SCARB1-209ENST00000545305 VGLL2Q8N8G2 317 aa16.83■□□□□ 0.28
SCARB1-209ENST00000545305 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.28
SCARB1-209ENST00000545305 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.28
SCARB1-209ENST00000545305 COL4A1P02462 1669 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 KLRG2A4D1S0 409 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-209ENST00000545305 TRIM6-TRIM34B2RNG4 842 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 CDC45O75419 566 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 SLC5A1P13866 664 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 TIMM10P62072 90 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 CHRNDQ07001 517 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 TAF1P21675 1872 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 ARAP2Q8WZ64 1704 aa16.82■□□□□ 0.28
SCARB1-209ENST00000545305 IFIT1P09914 478 aaKnown RBP16.81■□□□□ 0.28
SCARB1-209ENST00000545305 SDSP20132 328 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-209ENST00000545305 LPIN2Q92539 896 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-209ENST00000545305 ANKRD2Q9GZV1 360 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 A0A1B0GUL6 1792 aa16.81■□□□□ 0.28
SCARB1-209ENST00000545305 NPR1P16066 1061 aa16.8■□□□□ 0.28
SCARB1-209ENST00000545305 ATP5JP18859 108 aa16.8■□□□□ 0.28
SCARB1-209ENST00000545305 HOXA10P31260 410 aaPredicted RBP16.8■□□□□ 0.28
SCARB1-209ENST00000545305 R3HDM1Q15032 1099 aaKnown RBP16.8■□□□□ 0.28
SCARB1-209ENST00000545305 CNTROBQ8N137 903 aa16.8■□□□□ 0.28
SCARB1-209ENST00000545305 RILPL2Q969X0 211 aa16.8■□□□□ 0.28
SCARB1-209ENST00000545305 XAGE2Q96GT9 111 aa16.8■□□□□ 0.28
SCARB1-209ENST00000545305 AK9Q5TCS8 1911 aa16.79■□□□□ 0.28
SCARB1-209ENST00000545305 EIF5BO60841 1220 aaKnown RBP16.79■□□□□ 0.28
SCARB1-209ENST00000545305 KCNJ4P48050 445 aa16.79■□□□□ 0.28
SCARB1-209ENST00000545305 TTC39AQ5SRH9 613 aa16.79■□□□□ 0.28
SCARB1-209ENST00000545305 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
SCARB1-209ENST00000545305 MINPP1Q9UNW1 487 aa16.79■□□□□ 0.28
SCARB1-209ENST00000545305 COL11A2P13942 1736 aaPredicted RBP16.79■□□□□ 0.28
SCARB1-209ENST00000545305 TAF5LO75529 589 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 BBOX1O75936 387 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 SRGNP10124 158 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 FGFR2P21802 821 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 POLD1P28340 1107 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 ADORA1P30542 326 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 MASTLQ96GX5 879 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 MTFR1LQ9H019 292 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 TSHZ2Q9NRE2 1034 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 C10orf71Q711Q0 1435 aa16.78■□□□□ 0.28
SCARB1-209ENST00000545305 H0YIN7 160 aa16.77■□□□□ 0.28
SCARB1-209ENST00000545305 ZBTB7AO95365 584 aa16.77■□□□□ 0.28
SCARB1-209ENST00000545305 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
SCARB1-209ENST00000545305 BOLA2Q9H3K6 86 aa16.77■□□□□ 0.28
SCARB1-209ENST00000545305 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-209ENST00000545305 MAP4K4O95819 1239 aaPredicted RBP16.76■□□□□ 0.27
SCARB1-209ENST00000545305 ALDH1B1P30837 517 aa16.76■□□□□ 0.27
SCARB1-209ENST00000545305 STYK1Q6J9G0 422 aa16.76■□□□□ 0.27
SCARB1-209ENST00000545305 TBC1D9Q6ZT07 1266 aa16.76■□□□□ 0.27
SCARB1-209ENST00000545305 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCARB1-209ENST00000545305 EVI5LQ96CN4 794 aa16.76■□□□□ 0.27
SCARB1-209ENST00000545305 XDHP47989 1333 aa16.75■□□□□ 0.27
SCARB1-209ENST00000545305 UQCRFS1P1P0C7P4 283 aa16.75■□□□□ 0.27
SCARB1-209ENST00000545305 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCARB1-209ENST00000545305 DNAJC2Q99543 621 aaKnown RBP16.75■□□□□ 0.27
SCARB1-209ENST00000545305 HAUS7Q99871 368 aa16.75■□□□□ 0.27
SCARB1-209ENST00000545305 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
SCARB1-209ENST00000545305 UPF2Q9HAU5 1272 aaKnown RBP16.75■□□□□ 0.27
SCARB1-209ENST00000545305 ANKIB1Q9P2G1 1089 aa16.75■□□□□ 0.27
SCARB1-209ENST00000545305 LRRC37AA6NMS7 1700 aa16.74■□□□□ 0.27
SCARB1-209ENST00000545305 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-209ENST00000545305 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
SCARB1-209ENST00000545305 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
SCARB1-209ENST00000545305 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-209ENST00000545305 FSD1Q9BTV5 496 aa16.73■□□□□ 0.27
SCARB1-209ENST00000545305 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-209ENST00000545305 LEMD3Q9Y2U8 911 aa16.73■□□□□ 0.27
SCARB1-209ENST00000545305 ZNF804BA4D1E1 1349 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 SNAP23O00161 211 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 HIP1O00291 1037 aa16.72■□□□□ 0.27
SCARB1-209ENST00000545305 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms