RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 NBPF6Q5VWK0 638 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 USPL1Q5W0Q7 1092 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 PRPF40BQ6NWY9 871 aaKnown RBP9.56□□□□□ -0.88
LDHA-223ENST00000545215 NBPF4Q96M43 638 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 ADARB2Q9NS39 739 aaKnown RBP9.56□□□□□ -0.88
LDHA-223ENST00000545215 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 LIMD1Q9UGP4 676 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 COG6Q9Y2V7 657 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 RGPD2P0DJD1 1756 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 TTC28Q96AY4 2481 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 RPTORQ8N122 1335 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
LDHA-223ENST00000545215 KHSRPQ92945 711 aaKnown RBP eCLIP9.56□□□□□ -0.889e-7■■■□□ 18.5
LDHA-223ENST00000545215 BRIP1Q9BX63 1249 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 SNRKQ9NRH2 765 aa9.56□□□□□ -0.88
LDHA-223ENST00000545215 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
LDHA-223ENST00000545215 EIF6P56537 245 aaKnown RBP9.55□□□□□ -0.88
LDHA-223ENST00000545215 TUSC1Q2TAM9 212 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 CCDC93Q567U6 631 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 STYK1Q6J9G0 422 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 OTOP1Q7RTM1 612 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
LDHA-223ENST00000545215 C2orf69Q8N8R5 385 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 SPIRE2Q8WWL2 714 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 EYA1Q99502 592 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 GBA2Q9HCG7 927 aaPredicted RBP9.55□□□□□ -0.88
LDHA-223ENST00000545215 TRIM17Q9Y577 477 aa9.55□□□□□ -0.88
LDHA-223ENST00000545215 CACNA1SQ13698 1873 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 BCORQ6W2J9 1755 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 CD46P15529 392 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 CRKLP46109 303 aaKnown RBP9.54□□□□□ -0.88
LDHA-223ENST00000545215 DOK7Q18PE1 504 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 JDP2Q8WYK2 163 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 P2RX7Q99572 595 aaKnown RBP9.54□□□□□ -0.88
LDHA-223ENST00000545215 PTPN22Q9Y2R2 807 aa9.54□□□□□ -0.88
LDHA-223ENST00000545215 ZBTB7BO15156 539 aaPredicted RBP9.53□□□□□ -0.88
LDHA-223ENST00000545215 USHBP1Q8N6Y0 703 aa9.53□□□□□ -0.88
LDHA-223ENST00000545215 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
LDHA-223ENST00000545215 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
LDHA-223ENST00000545215 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
LDHA-223ENST00000545215 NR2E3Q9Y5X4 410 aa9.53□□□□□ -0.88
LDHA-223ENST00000545215 ANKRD31Q8N7Z5 1873 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 PIEZO1Q92508 2521 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 WTIPA6NIX2 430 aaPredicted RBP9.52□□□□□ -0.89
LDHA-223ENST00000545215 SPTLC1O15269 473 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
LDHA-223ENST00000545215 HOXC9P31274 260 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 LRIT3Q3SXY7 679 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 USP48Q86UV5 1035 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 NME9Q86XW9 330 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.52□□□□□ -0.89
LDHA-223ENST00000545215 RTKN2Q8IZC4 609 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 ZNF333Q96JL9 665 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 GPRC5DQ9NZD1 345 aa9.52□□□□□ -0.89
LDHA-223ENST00000545215 COL11A2P13942 1736 aaPredicted RBP9.52□□□□□ -0.89
LDHA-223ENST00000545215 LAMA2P24043 3122 aaKnown RBP9.51□□□□□ -0.89
LDHA-223ENST00000545215 KTN1Q86UP2 1357 aaKnown RBP9.51□□□□□ -0.89
LDHA-223ENST00000545215 SRGNP10124 158 aa9.51□□□□□ -0.89
LDHA-223ENST00000545215 TM4SF4P48230 202 aa9.51□□□□□ -0.89
LDHA-223ENST00000545215 DLK2Q6UY11 383 aa9.51□□□□□ -0.89
LDHA-223ENST00000545215 R3HDMLQ9H3Y0 253 aa9.51□□□□□ -0.89
LDHA-223ENST00000545215 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
LDHA-223ENST00000545215 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
LDHA-223ENST00000545215 RSBN1LQ6PCB5 846 aaPredicted RBP9.5□□□□□ -0.89
LDHA-223ENST00000545215 RASAL3Q86YV0 1011 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 MTMR14Q8NCE2 650 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
LDHA-223ENST00000545215 MASTLQ96GX5 879 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 GUCD1Q96NT3 240 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 NARFQ9UHQ1 456 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 MON2Q7Z3U7 1717 aa9.5□□□□□ -0.89
LDHA-223ENST00000545215 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
LDHA-223ENST00000545215 BMP8BP34820 402 aa9.49□□□□□ -0.89
LDHA-223ENST00000545215 SLC4A8Q2Y0W8 1093 aa9.49□□□□□ -0.89
LDHA-223ENST00000545215 INTS5Q6P9B9 1019 aaKnown RBP9.49□□□□□ -0.89
LDHA-223ENST00000545215 SULF1Q8IWU6 871 aa9.49□□□□□ -0.89
LDHA-223ENST00000545215 PRUNE2Q8WUY3 3088 aa9.48□□□□□ -0.89
LDHA-223ENST00000545215 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
LDHA-223ENST00000545215 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
LDHA-223ENST00000545215 GJA5P36382 358 aa9.48□□□□□ -0.89
LDHA-223ENST00000545215 HTATIP2Q9BUP3 242 aa9.48□□□□□ -0.89
LDHA-223ENST00000545215 LHX6Q9UPM6 363 aa9.48□□□□□ -0.89
LDHA-223ENST00000545215 PPP1R3GB7ZBB8 358 aa9.47□□□□□ -0.89
LDHA-223ENST00000545215 DNAJB2P25686 324 aa9.47□□□□□ -0.89
LDHA-223ENST00000545215 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
LDHA-223ENST00000545215 OLFM4Q6UX06 510 aa9.47□□□□□ -0.89
LDHA-223ENST00000545215 HCN4Q9Y3Q4 1203 aa9.47□□□□□ -0.89
LDHA-223ENST00000545215 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
LDHA-223ENST00000545215 COL4A5P29400 1685 aa9.46□□□□□ -0.89
LDHA-223ENST00000545215 MOXD2PA6NHM9 499 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 LILRB3O75022 631 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 AMPHP49418 695 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 BCAMP50895 628 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms