RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 TRERF1Q96PN7 1200 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 SUV39H2Q9H5I1 410 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 CDC14CA4D256 554 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 POTECB2RU33 542 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 KIF4AO95239 1232 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 FANCCQ00597 558 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 GRM2Q14416 872 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 C9orf131Q5VYM1 1079 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 FOXR1Q6PIV2 292 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
LEMD3-206ENST00000545026 SRCIN1Q9C0H9 1055 aa10.29□□□□□ -0.76
LEMD3-206ENST00000545026 METTL5Q9NRN9 209 aaKnown RBP10.29□□□□□ -0.76
LEMD3-206ENST00000545026 SV2AQ7L0J3 742 aa10.28□□□□□ -0.76
LEMD3-206ENST00000545026 DHX32Q7L7V1 743 aaKnown RBP10.28□□□□□ -0.76
LEMD3-206ENST00000545026 GLIS3Q8NEA6 775 aa10.28□□□□□ -0.76
LEMD3-206ENST00000545026 FAM8A1Q9UBU6 413 aa10.28□□□□□ -0.76
LEMD3-206ENST00000545026 C2CD2LO14523 706 aa10.27□□□□□ -0.77
LEMD3-206ENST00000545026 PLAURQ03405 335 aa10.27□□□□□ -0.77
LEMD3-206ENST00000545026 HYAL2Q12891 473 aa10.27□□□□□ -0.77
LEMD3-206ENST00000545026 USP17L7P0C7H9 530 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 ZNF76P36508 570 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 NRLP54845 237 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 RNF34Q969K3 372 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 CNTNAP3BQ96NU0 1288 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 CNTNAP3Q9BZ76 1288 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
LEMD3-206ENST00000545026 ZBTB42B2RXF5 422 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 ACPPP15309 386 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 NCAPG2Q86XI2 1143 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 CEP120Q8N960 986 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 TRPM4Q8TD43 1214 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 EHD4Q9H223 541 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 PRR12Q9ULL5 1215 aa10.25□□□□□ -0.77
LEMD3-206ENST00000545026 ERCC5P28715 1186 aaPredicted RBP10.24□□□□□ -0.77
LEMD3-206ENST00000545026 RAD51AP2Q09MP3 1159 aa10.24□□□□□ -0.77
LEMD3-206ENST00000545026 MEI1Q5TIA1 1274 aa10.24□□□□□ -0.77
LEMD3-206ENST00000545026 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
LEMD3-206ENST00000545026 NT5DC4Q86YG4 428 aa10.24□□□□□ -0.77
LEMD3-206ENST00000545026 NSUN5Q96P11 429 aaKnown RBP10.24□□□□□ -0.77
LEMD3-206ENST00000545026 TCF12Q99081 682 aa10.24□□□□□ -0.77
LEMD3-206ENST00000545026 ZKSCAN3Q9BRR0 538 aa10.24□□□□□ -0.77
LEMD3-206ENST00000545026 TRAK1Q9UPV9 953 aa10.24□□□□□ -0.77
LEMD3-206ENST00000545026 GPLD1P80108 840 aa10.23□□□□□ -0.77
LEMD3-206ENST00000545026 ZNF468Q5VIY5 522 aaPredicted RBP10.23□□□□□ -0.77
LEMD3-206ENST00000545026 SYT9Q86SS6 491 aa10.23□□□□□ -0.77
LEMD3-206ENST00000545026 C3orf58Q8NDZ4 430 aa10.23□□□□□ -0.77
LEMD3-206ENST00000545026 OSMRQ99650 979 aa10.23□□□□□ -0.77
LEMD3-206ENST00000545026 DZANK1Q9NVP4 752 aa10.23□□□□□ -0.77
LEMD3-206ENST00000545026 BMP4P12644 408 aa10.22□□□□□ -0.77
LEMD3-206ENST00000545026 GAS6Q14393 721 aa10.22□□□□□ -0.77
LEMD3-206ENST00000545026 TAF1CQ15572 869 aaPredicted RBP10.22□□□□□ -0.77
LEMD3-206ENST00000545026 C8orf37Q96NL8 207 aa10.22□□□□□ -0.77
LEMD3-206ENST00000545026 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
LEMD3-206ENST00000545026 PPP4R2Q9NY27 417 aa10.22□□□□□ -0.77
LEMD3-206ENST00000545026 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 NFKBIEO00221 500 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 SIN3BO75182 1162 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 TRPA1O75762 1119 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 GSTT1P30711 240 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 ST13P50502 369 aaKnown RBP10.21□□□□□ -0.77
LEMD3-206ENST00000545026 SIK1P57059 783 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 MLLT1Q03111 559 aaPredicted RBP10.21□□□□□ -0.77
LEMD3-206ENST00000545026 CCNJLQ8IV13 435 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 ABCB6Q9NP58 842 aa10.21□□□□□ -0.77
LEMD3-206ENST00000545026 DNAJB12Q9NXW2 375 aaKnown RBP10.21□□□□□ -0.77
LEMD3-206ENST00000545026 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
LEMD3-206ENST00000545026 J3QW42 95 aa10.2□□□□□ -0.78
LEMD3-206ENST00000545026 PCBP4P57723 403 aaKnown RBP10.2□□□□□ -0.78
LEMD3-206ENST00000545026 ZC3H6P61129 1189 aaKnown RBP10.2□□□□□ -0.78
LEMD3-206ENST00000545026 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
LEMD3-206ENST00000545026 IGFLR1Q9H665 355 aa10.2□□□□□ -0.78
LEMD3-206ENST00000545026 AVENQ9NQS1 362 aaPredicted RBP10.2□□□□□ -0.78
LEMD3-206ENST00000545026 NXF1Q9UBU9 619 aaKnown RBP10.2□□□□□ -0.78
LEMD3-206ENST00000545026 KLF15Q9UIH9 416 aa10.2□□□□□ -0.78
LEMD3-206ENST00000545026 IGSF3O75054 1194 aa10.19□□□□□ -0.78
LEMD3-206ENST00000545026 MX2P20592 715 aa10.19□□□□□ -0.78
LEMD3-206ENST00000545026 FCGRTP55899 365 aa10.19□□□□□ -0.78
LEMD3-206ENST00000545026 GPR161Q8N6U8 529 aaKnown RBP10.19□□□□□ -0.78
LEMD3-206ENST00000545026 SPACA7Q96KW9 195 aa10.19□□□□□ -0.78
LEMD3-206ENST00000545026 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
LEMD3-206ENST00000545026 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
LEMD3-206ENST00000545026 TMEM102Q8N9M5 508 aaPredicted RBP10.18□□□□□ -0.78
LEMD3-206ENST00000545026 NXPE3Q969Y0 559 aa10.18□□□□□ -0.78
LEMD3-206ENST00000545026 OXCT2Q9BYC2 517 aaPredicted RBP10.18□□□□□ -0.78
LEMD3-206ENST00000545026 UBE2OQ9C0C9 1292 aaKnown RBP10.18□□□□□ -0.78
LEMD3-206ENST00000545026 BHLHE41Q9C0J9 482 aaPredicted RBP10.18□□□□□ -0.78
LEMD3-206ENST00000545026 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
LEMD3-206ENST00000545026 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
LEMD3-206ENST00000545026 GRIA4P48058 902 aa10.17□□□□□ -0.78
LEMD3-206ENST00000545026 PCSK7Q16549 785 aa10.17□□□□□ -0.78
LEMD3-206ENST00000545026 NPAS3Q8IXF0 933 aa10.17□□□□□ -0.78
LEMD3-206ENST00000545026 TNFRSF25Q93038 417 aa10.17□□□□□ -0.78
LEMD3-206ENST00000545026 PBX4Q9BYU1 374 aa10.17□□□□□ -0.78
LEMD3-206ENST00000545026 RASSF4Q9H2L5 321 aa10.17□□□□□ -0.78
LEMD3-206ENST00000545026 H3BM21 787 aa10.16□□□□□ -0.78
LEMD3-206ENST00000545026 ARAFP10398 606 aa10.16□□□□□ -0.78
LEMD3-206ENST00000545026 ATP11AP98196 1134 aa10.16□□□□□ -0.78
LEMD3-206ENST00000545026 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
LEMD3-206ENST00000545026 NAALADL2Q58DX5 795 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms