RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CCDC113Q9H0I3 377 aa14.71□□□□□ -0.05
CHD4-211ENST00000544484 CETN2P41208 172 aa14.71□□□□□ -0.06
CHD4-211ENST00000544484 NSFL1CQ9UNZ2 370 aaKnown RBP14.71□□□□□ -0.06
CHD4-211ENST00000544484 USO1O60763 962 aaKnown RBP14.7□□□□□ -0.06
CHD4-211ENST00000544484 NBPF7P0C2Y1 421 aaPredicted RBP14.7□□□□□ -0.06
CHD4-211ENST00000544484 CTNNBL1Q8WYA6 563 aaPredicted RBP14.7□□□□□ -0.06
CHD4-211ENST00000544484 MMRN2Q9H8L6 949 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 PLEKHM2Q8IWE5 1019 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 DCAF5Q96JK2 942 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 ZNF830Q96NB3 372 aaPredicted RBP14.7□□□□□ -0.06
CHD4-211ENST00000544484 SYCP3Q8IZU3 236 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 SMARCC1Q92922 1105 aaPredicted RBP14.7□□□□□ -0.06
CHD4-211ENST00000544484 RXRAP19793 462 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 ANAPC15P60006 121 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 TRIM47Q96LD4 638 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 CNNM2Q9H8M5 875 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 PER1O15534 1290 aaPredicted RBP14.7□□□□□ -0.06
CHD4-211ENST00000544484 APOBRQ0VD83 1088 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 MAGEB6Q8N7X4 407 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 DACT1Q9NYF0 836 aa14.7□□□□□ -0.06
CHD4-211ENST00000544484 N4BP3O15049 544 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 AK2P54819 239 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 ZMYM3Q14202 1370 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 SEC24BO95487 1268 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 MAGEB6P1A0A0J9YX57 407 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 IP6K1Q92551 441 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 ANO6Q4KMQ2 910 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 GSDMDP57764 484 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 KANK3Q6NY19 840 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 TMTC2Q8N394 836 aa14.69□□□□□ -0.06
CHD4-211ENST00000544484 ZGPATQ8N5A5 531 aaKnown RBP14.69□□□□□ -0.06
CHD4-211ENST00000544484 TMCO5BA8MYB1 307 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 MYO1BO43795 1136 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 PAFAH1B1P43034 410 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 RRAGBQ5VZM2 374 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 FAM89AQ96GI7 184 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 RNF113AO15541 343 aaKnown RBP14.68□□□□□ -0.06
CHD4-211ENST00000544484 CPA1P15085 419 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 F13A1P00488 732 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 ZRSR2Q15696 482 aaKnown RBP14.68□□□□□ -0.06
CHD4-211ENST00000544484 LRSAM1Q6UWE0 723 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 PLCD4Q9BRC7 762 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 YTHDC2Q9H6S0 1430 aaKnown RBP14.68□□□□□ -0.06
CHD4-211ENST00000544484 TPTE2Q6XPS3 522 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 TTC41PQ6P2S7 1318 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 GBP2P32456 591 aaPredicted RBP14.68□□□□□ -0.06
CHD4-211ENST00000544484 GOPCQ9HD26 462 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 BTG4Q9NY30 223 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 ABCC10Q5T3U5 1492 aa14.68□□□□□ -0.06
CHD4-211ENST00000544484 SOS1Q07889 1333 aaPredicted RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 NOP2P46087 812 aaKnown RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 KLHDC4Q8TBB5 520 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 ORAI2Q96SN7 254 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 GBP3Q9H0R5 595 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 EXOC1Q9NV70 894 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 MCM9Q9NXL9 1143 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 RIMBP2O15034 1052 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 TIMM10P62072 90 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 GSTTP1A0A1W2PQM5 241 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 WDHD1O75717 1129 aaPredicted RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 CBX1P83916 185 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 OTUD7AQ8TE49 926 aaPredicted RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 STAT6P42226 847 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 CETN1Q12798 172 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 PRPF4BQ13523 1007 aaKnown RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 KCNG4Q8TDN1 519 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 PUS7Q96PZ0 661 aaKnown RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 TRIM21P19474 475 aaKnown RBP14.67□□□□□ -0.06
CHD4-211ENST00000544484 NAPAP54920 295 aa14.67□□□□□ -0.06
CHD4-211ENST00000544484 CHMLP26374 656 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 UBASH3AP57075 661 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 SMC5Q8IY18 1101 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 DNAJC25Q9H1X3 360 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 ZC3H12CQ9C0D7 883 aaKnown RBP14.66□□□□□ -0.06
CHD4-211ENST00000544484 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 NEMFO60524 1076 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
CHD4-211ENST00000544484 ZNF804AQ7Z570 1209 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHD4-211ENST00000544484 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
CHD4-211ENST00000544484 ZKSCAN3Q9BRR0 538 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
CHD4-211ENST00000544484 TBCAO75347 108 aaKnown RBP14.65□□□□□ -0.06
CHD4-211ENST00000544484 OGFOD1Q8N543 542 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 CCDC150Q8NCX0 1101 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 PUF60Q9UHX1 559 aaKnown RBP14.65□□□□□ -0.06
CHD4-211ENST00000544484 DHX58Q96C10 678 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 DYDC1Q8WWB3 177 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 PYM1Q9BRP8 204 aaKnown RBP14.65□□□□□ -0.06
CHD4-211ENST00000544484 GNG11P61952 73 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 VEZTQ9HBM0 779 aa14.65□□□□□ -0.06
CHD4-211ENST00000544484 BCCIPQ9P287 314 aaKnown RBP eCLIP14.65□□□□□ -0.06
CHD4-211ENST00000544484 TCOF1Q13428 1488 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms