RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 SSFA2P28290 1259 aa12.53□□□□□ -0.4
MDH1-216ENST00000544381 SIK1P57059 783 aa12.53□□□□□ -0.4
MDH1-216ENST00000544381 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
MDH1-216ENST00000544381 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
MDH1-216ENST00000544381 ALDH1L1O75891 902 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.41
MDH1-216ENST00000544381 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.41
MDH1-216ENST00000544381 RGS3P49796 1198 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 ANKRD44Q8N8A2 993 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
MDH1-216ENST00000544381 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
MDH1-216ENST00000544381 HMMRO75330 724 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 A1BGP04217 495 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 CEP85Q6P2H3 762 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 SKAP1Q86WV1 359 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 LINS1Q8NG48 757 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
MDH1-216ENST00000544381 SBF1O95248 1867 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 MMP10P09238 476 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 NBPF10Q6P3W6 841 aaKnown RBP12.5□□□□□ -0.41
MDH1-216ENST00000544381 LRP10Q7Z4F1 713 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 SIRT2Q8IXJ6 389 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 NBPF15Q8N660 670 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
MDH1-216ENST00000544381 C9orf78Q9NZ63 289 aaPredicted RBP12.5□□□□□ -0.41
MDH1-216ENST00000544381 GNPATO15228 680 aa12.49□□□□□ -0.41
MDH1-216ENST00000544381 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
MDH1-216ENST00000544381 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
MDH1-216ENST00000544381 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
MDH1-216ENST00000544381 TJP1Q07157 1748 aa12.49□□□□□ -0.41
MDH1-216ENST00000544381 PPP1R3GB7ZBB8 358 aa12.48□□□□□ -0.41
MDH1-216ENST00000544381 MYD88Q99836 296 aa12.48□□□□□ -0.41
MDH1-216ENST00000544381 LRRFIP2Q9Y608 721 aaKnown RBP12.48□□□□□ -0.41
MDH1-216ENST00000544381 A0A0G2JLW4 131 aa12.47□□□□□ -0.41
MDH1-216ENST00000544381 KCNA3P22001 575 aa12.47□□□□□ -0.41
MDH1-216ENST00000544381 ATP8B2P98198 1209 aa12.47□□□□□ -0.41
MDH1-216ENST00000544381 NUCB1Q02818 461 aa12.47□□□□□ -0.41
MDH1-216ENST00000544381 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
MDH1-216ENST00000544381 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
MDH1-216ENST00000544381 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
MDH1-216ENST00000544381 DCTPP1Q9H773 170 aa12.47□□□□□ -0.41
MDH1-216ENST00000544381 ZNF330Q9Y3S2 320 aaPredicted RBP12.47□□□□□ -0.41
MDH1-216ENST00000544381 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
MDH1-216ENST00000544381 CYP19A1P11511 503 aaPredicted RBP12.46□□□□□ -0.41
MDH1-216ENST00000544381 COL9A1P20849 921 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 APLP1P51693 650 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 HTRA3P83110 453 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 NBR1Q14596 966 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 KIF6Q6ZMV9 814 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
MDH1-216ENST00000544381 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
MDH1-216ENST00000544381 NEURL1BA8MQ27 555 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 GRM8O00222 908 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 TOMM70O94826 608 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 IGKV5-2P06315 115 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 GYS1P13807 737 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 DPEP1P16444 411 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 TTLL7Q6ZT98 887 aa12.45□□□□□ -0.42
MDH1-216ENST00000544381 IBTKQ9P2D0 1353 aaPredicted RBP12.45□□□□□ -0.42
MDH1-216ENST00000544381 AFDNP55196 1824 aaKnown RBP12.44□□□□□ -0.42
MDH1-216ENST00000544381 TGFB2P61812 414 aa12.44□□□□□ -0.42
MDH1-216ENST00000544381 GCKRQ14397 625 aa12.44□□□□□ -0.42
MDH1-216ENST00000544381 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
MDH1-216ENST00000544381 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
MDH1-216ENST00000544381 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
MDH1-216ENST00000544381 UTYO14607 1347 aa12.44□□□□□ -0.42
MDH1-216ENST00000544381 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
MDH1-216ENST00000544381 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
MDH1-216ENST00000544381 ARHGEF1Q92888 912 aaKnown RBP12.43□□□□□ -0.42
MDH1-216ENST00000544381 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
MDH1-216ENST00000544381 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
MDH1-216ENST00000544381 PNMA6EA0A0J9YXQ4 647 aa12.42□□□□□ -0.42
MDH1-216ENST00000544381 GRXCR2A6NFK2 248 aa12.42□□□□□ -0.42
MDH1-216ENST00000544381 BHMG1C9JSJ3 638 aaPredicted RBP12.42□□□□□ -0.42
MDH1-216ENST00000544381 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
MDH1-216ENST00000544381 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
MDH1-216ENST00000544381 CCDC87Q9NVE4 849 aa12.42□□□□□ -0.42
MDH1-216ENST00000544381 ZBTB1Q9Y2K1 713 aa12.42□□□□□ -0.42
MDH1-216ENST00000544381 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
MDH1-216ENST00000544381 APBB1O00213 710 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 MAP3K7O43318 606 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
MDH1-216ENST00000544381 DDR1Q08345 913 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 COL13A1Q5TAT6 717 aaPredicted RBP12.41□□□□□ -0.42
MDH1-216ENST00000544381 JMYQ8N9B5 988 aa12.41□□□□□ -0.42
MDH1-216ENST00000544381 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
MDH1-216ENST00000544381 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms