RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 NBPF1Q3BBV0 1214 aa8.45□□□□□ -1.06
LDHA-221ENST00000543445 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
LDHA-221ENST00000543445 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
LDHA-221ENST00000543445 TMC1Q8TDI8 760 aa8.45□□□□□ -1.06
LDHA-221ENST00000543445 SREK1Q8WXA9 508 aaKnown RBP8.45□□□□□ -1.06
LDHA-221ENST00000543445 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
LDHA-221ENST00000543445 FAM163AQ96GL9 167 aaPredicted RBP8.45□□□□□ -1.06
LDHA-221ENST00000543445 CDK19Q9BWU1 502 aa8.45□□□□□ -1.06
LDHA-221ENST00000543445 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
LDHA-221ENST00000543445 POLR3AO14802 1390 aaPredicted RBP8.45□□□□□ -1.06
LDHA-221ENST00000543445 A0A0G2JS52 829 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 ERVH48-1M5A8F1 160 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 S1PR4O95977 384 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 MYT1Q01538 1121 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 CHRNA2Q15822 529 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 TNS4Q8IZW8 715 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 ACEP12821 1306 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 SPATA31A1Q5TZJ5 1347 aa8.44□□□□□ -1.06
LDHA-221ENST00000543445 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
LDHA-221ENST00000543445 TOPAZ1Q8N9V7 1692 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 MPSTP25325 297 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 GDF10P55107 478 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 AAMPQ13685 434 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 INTS6LQ5JSJ4 861 aaKnown RBP8.43□□□□□ -1.06
LDHA-221ENST00000543445 TJAP1Q5JTD0 557 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
LDHA-221ENST00000543445 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
LDHA-221ENST00000543445 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
LDHA-221ENST00000543445 P4HBP07237 508 aaKnown RBP8.42□□□□□ -1.06
LDHA-221ENST00000543445 VARSP26640 1264 aaKnown RBP8.42□□□□□ -1.06
LDHA-221ENST00000543445 BAG6P46379 1132 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 ERVK-9P63128 1117 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 FGD1P98174 961 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 BACH2Q9BYV9 841 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 MAP4K5Q9Y4K4 846 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 DISP2A7MBM2 1401 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 NRKQ7Z2Y5 1582 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 CAMTA1Q9Y6Y1 1673 aa8.42□□□□□ -1.06
LDHA-221ENST00000543445 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 LRP5O75197 1615 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 SSH2Q76I76 1423 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 USP19O94966 1318 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 SCNN1DP51172 638 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 PLCB3Q01970 1234 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 NAALADL2Q58DX5 795 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 ALKBH2Q6NS38 261 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 TSPAN10Q9H1Z9 355 aaPredicted RBP8.41□□□□□ -1.06
LDHA-221ENST00000543445 SERTAD1Q9UHV2 236 aa8.41□□□□□ -1.06
LDHA-221ENST00000543445 TNS1Q9HBL0 1735 aaKnown RBP8.4□□□□□ -1.06
LDHA-221ENST00000543445 KIAA1210Q9ULL0 1709 aa8.4□□□□□ -1.06
LDHA-221ENST00000543445 LMO7Q8WWI1 1683 aa8.4□□□□□ -1.06
LDHA-221ENST00000543445 SCAMP3O14828 347 aaKnown RBP8.4□□□□□ -1.06
LDHA-221ENST00000543445 TREHO43280 583 aa8.4□□□□□ -1.06
LDHA-221ENST00000543445 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
LDHA-221ENST00000543445 INHAP05111 366 aa8.4□□□□□ -1.06
LDHA-221ENST00000543445 ERCC5P28715 1186 aaPredicted RBP8.4□□□□□ -1.06
LDHA-221ENST00000543445 EZH2Q15910 746 aaKnown RBP8.4□□□□□ -1.06
LDHA-221ENST00000543445 OSBPL3Q9H4L5 887 aa8.4□□□□□ -1.06
LDHA-221ENST00000543445 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
LDHA-221ENST00000543445 PPIP5K1Q6PFW1 1433 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 CPDO75976 1380 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 TRIM37O94972 964 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
LDHA-221ENST00000543445 MRPL58Q14197 206 aaKnown RBP8.39□□□□□ -1.07
LDHA-221ENST00000543445 SF3A1Q15459 793 aaKnown RBP8.39□□□□□ -1.07
LDHA-221ENST00000543445 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 NKX2-3Q8TAU0 364 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 CAMKK2Q96RR4 588 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 SAP130Q9H0E3 1048 aa8.39□□□□□ -1.07
LDHA-221ENST00000543445 PPP1R1BQ9UD71 204 aaPredicted RBP8.39□□□□□ -1.07
LDHA-221ENST00000543445 RGPD1P0DJD0 1748 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
LDHA-221ENST00000543445 GCP02774 474 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 HSP90B1P14625 803 aaKnown RBP8.38□□□□□ -1.07
LDHA-221ENST00000543445 MAPK8P45983 427 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
LDHA-221ENST00000543445 FMR1Q06787 632 aaKnown RBP eCLIP8.38□□□□□ -1.07
LDHA-221ENST00000543445 ARID5BQ14865 1188 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 R3HDM1Q15032 1099 aaKnown RBP8.38□□□□□ -1.07
LDHA-221ENST00000543445 DMRTB1Q96MA1 342 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 PUS7Q96PZ0 661 aaKnown RBP8.38□□□□□ -1.07
LDHA-221ENST00000543445 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 PRKD2Q9BZL6 878 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 STIM2Q9P246 746 aa8.38□□□□□ -1.07
LDHA-221ENST00000543445 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
LDHA-221ENST00000543445 A0A1W2PRU2 124 aa8.37□□□□□ -1.07
LDHA-221ENST00000543445 POTEMA6NI47 508 aa8.37□□□□□ -1.07
LDHA-221ENST00000543445 STAU1O95793 577 aaKnown RBP8.37□□□□□ -1.07
LDHA-221ENST00000543445 LDHBP07195 334 aaKnown RBP8.37□□□□□ -1.07
LDHA-221ENST00000543445 EPHA4P54764 986 aa8.37□□□□□ -1.07
LDHA-221ENST00000543445 PTPN5P54829 565 aa8.37□□□□□ -1.07
LDHA-221ENST00000543445 PDE3BQ13370 1112 aa8.37□□□□□ -1.07
LDHA-221ENST00000543445 FAM196AQ6ZSG2 479 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms