RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 CNNM1Q9NRU3 951 aa11.32□□□□□ -0.6
GNE-206ENST00000543356 PLSCR1O15162 318 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 SGSM2O43147 1006 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 SF3B3Q15393 1217 aaKnown RBP11.31□□□□□ -0.6
GNE-206ENST00000543356 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 TICAM2Q86XR7 235 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 RUFY2Q8WXA3 655 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 NEUROD6Q96NK8 337 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 DIAPH3Q9NSV4 1193 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 TXNRD1Q16881 649 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 RGS17Q9UGC6 210 aaPredicted RBP11.31□□□□□ -0.6
GNE-206ENST00000543356 RAD50Q92878 1312 aa11.31□□□□□ -0.6
GNE-206ENST00000543356 PHF14O94880 888 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 TIMM10P62072 90 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 SNX21Q969T3 373 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
GNE-206ENST00000543356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
GNE-206ENST00000543356 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 BICDL1Q6ZP65 573 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 NBPF5PQ86XG9 351 aaPredicted RBP11.3□□□□□ -0.6
GNE-206ENST00000543356 FSD1Q9BTV5 496 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 SNRKQ9NRH2 765 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 COL4A1P02462 1669 aa11.3□□□□□ -0.6
GNE-206ENST00000543356 PDE8BO95263 885 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 MCCP23508 829 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 PROM2Q8N271 834 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 IL17RAQ96F46 866 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 XAGE2Q96GT9 111 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
GNE-206ENST00000543356 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 IL25Q9H293 177 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 ANO2Q9NQ90 1003 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
GNE-206ENST00000543356 RABEP1Q15276 862 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
GNE-206ENST00000543356 ANAPC15P60006 121 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
GNE-206ENST00000543356 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
GNE-206ENST00000543356 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
GNE-206ENST00000543356 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 BRPF3Q9ULD4 1205 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 FGFR2P21802 821 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
GNE-206ENST00000543356 ADORA1P30542 326 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
GNE-206ENST00000543356 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
GNE-206ENST00000543356 APBA3O96018 575 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.6
GNE-206ENST00000543356 SLC4A3P48751 1232 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 NMIQ13287 307 aaPredicted RBP11.27□□□□□ -0.6
GNE-206ENST00000543356 NFIXQ14938 502 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 POTEAQ6S8J7 498 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 HSCBQ8IWL3 235 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.6
GNE-206ENST00000543356 PAG1Q9NWQ8 432 aa11.27□□□□□ -0.6
GNE-206ENST00000543356 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
GNE-206ENST00000543356 GYS1P13807 737 aa11.27□□□□□ -0.61
GNE-206ENST00000543356 GORABQ5T7V8 394 aa11.27□□□□□ -0.61
GNE-206ENST00000543356 LPIN2Q92539 896 aa11.27□□□□□ -0.61
GNE-206ENST00000543356 HSPA4P34932 840 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 EDC3Q96F86 508 aaKnown RBP11.26□□□□□ -0.61
GNE-206ENST00000543356 NLRP3Q96P20 1036 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 AKAP11Q9UKA4 1901 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 QSER1Q2KHR3 1735 aa11.26□□□□□ -0.61
GNE-206ENST00000543356 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 SLC5A1P13866 664 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
GNE-206ENST00000543356 FAM227BQ96M60 508 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 BSDC1Q9NW68 430 aaPredicted RBP11.25□□□□□ -0.61
GNE-206ENST00000543356 NRXN2Q9P2S2 1712 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 MYH7P12883 1935 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 GOLIM4O00461 696 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 ARID4AP29374 1257 aaPredicted RBP11.25□□□□□ -0.61
GNE-206ENST00000543356 ZNF827Q17R98 1081 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 CNBD1Q8NA66 436 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 NDUFB9Q9Y6M9 179 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 CCDC171Q6TFL3 1326 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 EP400Q96L91 3159 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 TAF1P21675 1872 aa11.25□□□□□ -0.61
GNE-206ENST00000543356 UQCRFS1P1P0C7P4 283 aa11.24□□□□□ -0.61
GNE-206ENST00000543356 TM4SF1P30408 202 aa11.24□□□□□ -0.61
GNE-206ENST00000543356 CHRNDQ07001 517 aa11.24□□□□□ -0.61
GNE-206ENST00000543356 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
GNE-206ENST00000543356 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
GNE-206ENST00000543356 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
GNE-206ENST00000543356 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 HELBQ8NG08 1087 aaPredicted RBP11.23□□□□□ -0.61
GNE-206ENST00000543356 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 SCARF1Q14162 830 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms