RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-214ENST00000543048 APLP1P51693 650 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CTSWP56202 376 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 GPSM2P81274 684 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 KIAA2012Q0VF49 1180 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 BEND3Q5T5X7 828 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 PLA2G12BQ9BX93 195 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 HACL1Q9UJ83 578 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 SPEF2Q9C093 1822 aa12.37□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 COL4A5P29400 1685 aa12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 C6orf229H3BNL8 230 aa12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CASP7P55210 303 aa12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CDC5LQ99459 802 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 POLLQ9UGP5 575 aa12.36□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CSF1RP07333 972 aa12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 EYA3Q99504 573 aa12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 GREM2Q9H772 168 aa12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 COL4A1P02462 1669 aa12.35□□□□□ -0.43
TNFRSF1A-214ENST00000543048 RTL9Q8NET4 1388 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 EPHX2P34913 555 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CXCL9Q07325 125 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 TNIP1Q15025 636 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 TBC1D16Q8TBP0 767 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-214ENST00000543048 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 GGA1Q9UJY5 639 aa12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
TNFRSF1A-214ENST00000543048 DUOX1Q9NRD9 1551 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 GRM8O00222 908 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 RAD17O75943 681 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ITGA6P23229 1130 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 FOXO4P98177 505 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 EAPPQ56P03 285 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 PTPRCP08575 1304 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 XDHP47989 1333 aa12.32□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ANKRD18BA2A2Z9 1011 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 YDJCA8MPS7 323 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 G3V3G9 751 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 UFL1O94874 794 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 EPS15P42566 896 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 MPHOSPH8Q99549 860 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 DBNDD1Q9H9R9 158 aa12.31□□□□□ -0.44
TNFRSF1A-214ENST00000543048 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 SCNN1DP51172 638 aa12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 DNAJC5GQ8N7S2 189 aa12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 GPRC5DQ9NZD1 345 aa12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 SCN9AQ15858 1988 aa12.3□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ECE2O60344 883 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 IFIT5Q13325 482 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ANKRD2Q9GZV1 360 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
TNFRSF1A-214ENST00000543048 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 PSME4Q14997 1843 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 TRPM7Q96QT4 1865 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 H7C1D1 291 aa12.28□□□□□ -0.44
TNFRSF1A-214ENST00000543048 PSMD14O00487 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms