RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 BRCA1P38398 1863 aaKnown RBP7.29□□□□□ -1.24
ABCF1-207ENST00000542772 LRP5O75197 1615 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 SLX4Q8IY92 1834 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 MROH5Q6ZUA9 1318 aa7.28□□□□□ -1.24
ABCF1-207ENST00000542772 COL11A2P13942 1736 aaPredicted RBP7.28□□□□□ -1.24
ABCF1-207ENST00000542772 PDE8BO95263 885 aa7.28□□□□□ -1.24
ABCF1-207ENST00000542772 FGFR2P21802 821 aa7.28□□□□□ -1.24
ABCF1-207ENST00000542772 PRPF40BQ6NWY9 871 aaKnown RBP7.28□□□□□ -1.24
ABCF1-207ENST00000542772 RTFDC1Q9BY42 306 aaPredicted RBP7.28□□□□□ -1.24
ABCF1-207ENST00000542772 ANKRD2Q9GZV1 360 aa7.28□□□□□ -1.24
ABCF1-207ENST00000542772 VPS33BQ9H267 617 aa7.28□□□□□ -1.24
ABCF1-207ENST00000542772 PPP1R1BQ9UD71 204 aaPredicted RBP7.28□□□□□ -1.24
ABCF1-207ENST00000542772 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
ABCF1-207ENST00000542772 KDM2BQ8NHM5 1336 aa7.27□□□□□ -1.24
ABCF1-207ENST00000542772 SNED1Q8TER0 1413 aa7.27□□□□□ -1.24
ABCF1-207ENST00000542772 PPEF1O14829 653 aaPredicted RBP7.27□□□□□ -1.25
ABCF1-207ENST00000542772 CHRNDQ07001 517 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 UBE4AQ14139 1066 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 DALRD3Q5D0E6 543 aaKnown RBP7.27□□□□□ -1.25
ABCF1-207ENST00000542772 C15orf52Q6ZUT6 534 aaKnown RBP7.27□□□□□ -1.25
ABCF1-207ENST00000542772 ERC1Q8IUD2 1116 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 RHPN1Q8TCX5 695 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 KIF1BPQ96EK5 621 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 CNNM1Q9NRU3 951 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 LEMD3Q9Y2U8 911 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.27□□□□□ -1.25
ABCF1-207ENST00000542772 IRS2Q9Y4H2 1338 aa7.27□□□□□ -1.25
ABCF1-207ENST00000542772 SRCAPQ6ZRS2 3230 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 ATP2B4P23634 1241 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 GPSM2P81274 684 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 TFCP2Q12800 502 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 TAF7LQ5H9L4 462 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 RTKN2Q8IZC4 609 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 MPNDQ8N594 471 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 SIL1Q9H173 461 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 CEP126Q9P2H0 1117 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 EXOC6BQ9Y2D4 811 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 AKAP2Q9Y2D5 859 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 ARFGEF1Q9Y6D6 1849 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 LRRC37AA6NMS7 1700 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 XDHP47989 1333 aa7.26□□□□□ -1.25
ABCF1-207ENST00000542772 WTIPA6NIX2 430 aaPredicted RBP7.25□□□□□ -1.25
ABCF1-207ENST00000542772 C21orf2O43822 256 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 TAF5LO75529 589 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 TIMM10P62072 90 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 NUCB1Q02818 461 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 CENPQQ7L2Z9 268 aaPredicted RBP7.25□□□□□ -1.25
ABCF1-207ENST00000542772 HELBQ8NG08 1087 aaPredicted RBP7.25□□□□□ -1.25
ABCF1-207ENST00000542772 TBC1D16Q8TBP0 767 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 LPIN2Q92539 896 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 EAF2Q96CJ1 260 aaPredicted RBP7.25□□□□□ -1.25
ABCF1-207ENST00000542772 CCDC136Q96JN2 1154 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 PSMD1Q99460 953 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 LRRCC1Q9C099 1032 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 TMX4Q9H1E5 349 aaPredicted RBP7.25□□□□□ -1.25
ABCF1-207ENST00000542772 POLLQ9UGP5 575 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 NSFL1CQ9UNZ2 370 aaKnown RBP7.25□□□□□ -1.25
ABCF1-207ENST00000542772 ZNF804BA4D1E1 1349 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 LTBP3Q9NS15 1303 aa7.25□□□□□ -1.25
ABCF1-207ENST00000542772 LTBP1Q14766 1721 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 FER1L6Q2WGJ9 1857 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 A0A1B0GUL6 1792 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 A0A1B0GUL7 405 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 CCDC93Q567U6 631 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 TNNI3KQ59H18 835 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 METTL24Q5JXM2 366 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 ANKRD45Q5TZF3 282 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 OLFM4Q6UX06 510 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 FBXO33Q7Z6M2 555 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 SLC51AQ86UW1 340 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 CHD1LQ86WJ1 897 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 KLHL34Q8N239 644 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 CLASRPQ8N2M8 674 aaKnown RBP7.24□□□□□ -1.25
ABCF1-207ENST00000542772 SUPT20HQ8NEM7 779 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 ZNF512BQ96KM6 892 aaPredicted RBP7.24□□□□□ -1.25
ABCF1-207ENST00000542772 FAM84BQ96KN1 310 aaPredicted RBP7.24□□□□□ -1.25
ABCF1-207ENST00000542772 BCS1LQ9Y276 419 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 GTF3C3Q9Y5Q9 886 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 FPGT-TNNI3KV9GXZ4 949 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 SALL3Q9BXA9 1300 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 CACNA1SQ13698 1873 aa7.24□□□□□ -1.25
ABCF1-207ENST00000542772 GOLGB1Q14789 3259 aaKnown RBP7.23□□□□□ -1.25
ABCF1-207ENST00000542772 SPEF2Q9C093 1822 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 SNAP23O00161 211 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 NFKBIEO00221 500 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 YBX3P16989 372 aaKnown RBP eCLIP7.23□□□□□ -1.25
ABCF1-207ENST00000542772 FKBP4Q02790 459 aaKnown RBP eCLIP7.23□□□□□ -1.25
ABCF1-207ENST00000542772 PUM3Q15397 648 aaKnown RBP7.23□□□□□ -1.25
ABCF1-207ENST00000542772 WASHC4Q2M389 1173 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 DPP8Q6V1X1 898 aaPredicted RBP7.23□□□□□ -1.25
ABCF1-207ENST00000542772 TXNRD3Q86VQ6 643 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 C16orf71Q8IYS4 520 aaPredicted RBP7.23□□□□□ -1.25
ABCF1-207ENST00000542772 XAGE2Q96GT9 111 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 OSBPL3Q9H4L5 887 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 IL1RAPL2Q9NP60 686 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 ANKIB1Q9P2G1 1089 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 STAP2Q9UGK3 403 aa7.23□□□□□ -1.25
ABCF1-207ENST00000542772 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 1017.8 ms