RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ELP1O95163 1332 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 UVSSAQ2YD98 709 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
PTPRO-208ENST00000542557 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
PTPRO-208ENST00000542557 NECAB1Q8N987 351 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 NEK1Q96PY6 1258 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 TAF6LQ9Y6J9 622 aa7.79□□□□□ -1.16
PTPRO-208ENST00000542557 FIBPO43427 364 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 LARP1BQ659C4 914 aaKnown RBP7.78□□□□□ -1.16
PTPRO-208ENST00000542557 ABCC12Q96J65 1359 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 DSCC1Q9BVC3 393 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 PLA2G12BQ9BX93 195 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 TEX13AQ9BXU3 409 aaPredicted RBP7.78□□□□□ -1.16
PTPRO-208ENST00000542557 PAG1Q9NWQ8 432 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 NOL7Q9UMY1 257 aaKnown RBP7.78□□□□□ -1.16
PTPRO-208ENST00000542557 LAMA4Q16363 1823 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 VPS37CA5D8V6 355 aaPredicted RBP7.78□□□□□ -1.16
PTPRO-208ENST00000542557 MCM5P33992 734 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 DNM1Q05193 864 aaKnown RBP7.78□□□□□ -1.16
PTPRO-208ENST00000542557 DDX46Q7L014 1031 aaKnown RBP7.78□□□□□ -1.16
PTPRO-208ENST00000542557 GTF3C6Q969F1 213 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 CHMP3Q9Y3E7 222 aa7.78□□□□□ -1.16
PTPRO-208ENST00000542557 CYP21A2P08686 494 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 MSNP26038 577 aaKnown RBP7.77□□□□□ -1.17
PTPRO-208ENST00000542557 KRT85P78386 507 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 TCIRG1Q13488 830 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 COL9A3Q14050 684 aaPredicted RBP7.77□□□□□ -1.17
PTPRO-208ENST00000542557 ZMYM1Q5SVZ6 1142 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 DDX54Q8TDD1 881 aaKnown RBP7.77□□□□□ -1.17
PTPRO-208ENST00000542557 ZBTB3Q9H5J0 574 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 TMOD3Q9NYL9 352 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 ANKRD36CQ5JPF3 1778 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 DISP2A7MBM2 1401 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.77□□□□□ -1.17
PTPRO-208ENST00000542557 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 ITGB4P16144 1822 aa7.77□□□□□ -1.17
PTPRO-208ENST00000542557 COL14A1Q05707 1796 aaKnown RBP7.77□□□□□ -1.17
PTPRO-208ENST00000542557 A0A1B0GUL7 405 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 PCCAP05165 728 aaPredicted RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 CCDC129Q6ZRS4 1044 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 CDC37L1Q7L3B6 337 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 SEC62Q99442 399 aaKnown RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 FUCA2Q9BTY2 467 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 NDUFB9Q9Y6M9 179 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 WNK3Q9BYP7 1800 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 GOLIM4O00461 696 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 ZNF500O60304 480 aaPredicted RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 IFIT1P09914 478 aaKnown RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 LRRFIP1Q32MZ4 808 aaKnown RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 LRRC24Q50LG9 513 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 DHX37Q8IY37 1157 aaKnown RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 RNF214Q8ND24 703 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 TCEANC2Q96MN5 208 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 NEUROD6Q96NK8 337 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 LLPHQ9BRT6 129 aaKnown RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 AGXT2Q9BYV1 514 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 SCAND2PQ9GZW5 306 aaPredicted RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 ANO8Q9HCE9 1232 aaPredicted RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 ZKSCAN5Q9Y2L8 839 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 CDHR2Q9BYE9 1310 aa7.76□□□□□ -1.17
PTPRO-208ENST00000542557 ZNF335Q9H4Z2 1342 aaPredicted RBP7.76□□□□□ -1.17
PTPRO-208ENST00000542557 EVA1CP58658 441 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 KIF6Q6ZMV9 814 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 Q6ZUG5 572 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 SMARCC2Q8TAQ2 1214 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 AKAP2Q9Y2D5 859 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 MAST3O60307 1309 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 RNF113AO15541 343 aaKnown RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 CHGBP05060 677 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 CSF1RP07333 972 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 TIMM10P62072 90 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 CCDC57Q2TAC2 916 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 DHX32Q7L7V1 743 aaKnown RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 TTC6Q86TZ1 520 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 ZBTB38Q8NAP3 1195 aaPredicted RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 STRN4Q9NRL3 753 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 CEP126Q9P2H0 1117 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 LRP5O75197 1615 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 RIC1Q4ADV7 1423 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 COL22A1Q8NFW1 1626 aaPredicted RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 MYH15Q9Y2K3 1946 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 PFKFB2O60825 505 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 STARD3NLO95772 234 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 ZFYP08048 801 aaPredicted RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 STOX1Q6ZVD7 989 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 FBXL16Q8N461 479 aa7.75□□□□□ -1.17
PTPRO-208ENST00000542557 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 DDX60Q8IY21 1712 aaKnown RBP7.75□□□□□ -1.17
PTPRO-208ENST00000542557 MYH3P11055 1940 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 MYH7P12883 1935 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 MAP3K15Q6ZN16 1313 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 BCL9O00512 1426 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 HSPD1P10809 573 aaKnown RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 HSP90AB3PQ58FF7 597 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 CHMP4CQ96CF2 233 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 ZNF594Q96JF6 807 aaPredicted RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 NAP1L5Q96NT1 182 aaPredicted RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 OFD1O75665 1012 aa7.74□□□□□ -1.17
PTPRO-208ENST00000542557 HMGN5P82970 282 aaKnown RBP7.74□□□□□ -1.17
PTPRO-208ENST00000542557 EXOSC10Q01780 885 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms