RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 C21orf2O43822 256 aa13.03□□□□□ -0.32
AC009509.3-201ENST00000542428 IGHMBP2P38935 993 aaKnown RBP13.03□□□□□ -0.32
AC009509.3-201ENST00000542428 PTPN12Q05209 780 aaKnown RBP13.03□□□□□ -0.32
AC009509.3-201ENST00000542428 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
AC009509.3-201ENST00000542428 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
AC009509.3-201ENST00000542428 POLA2Q14181 598 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 CCDC93Q567U6 631 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 SSH3Q8TE77 659 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 SIL1Q9H173 461 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
AC009509.3-201ENST00000542428 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 RASSF7Q02833 373 aa13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 MPHOSPH8Q99549 860 aa13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
AC009509.3-201ENST00000542428 NFKBIEO00221 500 aa13□□□□□ -0.33
AC009509.3-201ENST00000542428 ATP8B2P98198 1209 aa13□□□□□ -0.33
AC009509.3-201ENST00000542428 COPRSQ9NQ92 184 aa13□□□□□ -0.33
AC009509.3-201ENST00000542428 CNNM1Q9NRU3 951 aa13□□□□□ -0.33
AC009509.3-201ENST00000542428 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
AC009509.3-201ENST00000542428 XDHP47989 1333 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 BBOX1O75936 387 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 GPSM2P81274 684 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 CHRNDQ07001 517 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 RPAP2Q8IXW5 612 aaPredicted RBP12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
AC009509.3-201ENST00000542428 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 EYA2O00167 538 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 CIAO1O76071 339 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 GPR162Q16538 588 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 MINPP1Q9UNW1 487 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
AC009509.3-201ENST00000542428 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 MROH5Q6ZUA9 1318 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 HMMRO75330 724 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 UFL1O94874 794 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 NEFLP07196 543 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 PRELPP51888 382 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 AAMPQ13685 434 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 RIPOR2Q9Y4F9 1068 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
AC009509.3-201ENST00000542428 TAF5LO75529 589 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 KLRK1P26718 216 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 MPNDQ8N594 471 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 PODXL2Q9NZ53 605 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 SCN4AP35499 1836 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 UTRNP46939 3433 aa12.96□□□□□ -0.33
AC009509.3-201ENST00000542428 WDR90Q96KV7 1748 aa12.96□□□□□ -0.34
AC009509.3-201ENST00000542428 IRS2Q9Y4H2 1338 aa12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 SNAP23O00161 211 aa12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 TBC1D16Q8TBP0 767 aa12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 PSMD1Q99460 953 aa12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 RTFDC1Q9BY42 306 aaPredicted RBP12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 TMX4Q9H1E5 349 aaPredicted RBP12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 ANKIB1Q9P2G1 1089 aa12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
AC009509.3-201ENST00000542428 ZNF804BA4D1E1 1349 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 SASH1O94885 1247 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 IL15P40933 162 aaPredicted RBP12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 RTKN2Q8IZC4 609 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 ANKRD2Q9GZV1 360 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 ZNF277Q9NRM2 450 aaPredicted RBP12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 FOCADQ5VW36 1801 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
AC009509.3-201ENST00000542428 PDE8BO95263 885 aa12.93□□□□□ -0.34
AC009509.3-201ENST00000542428 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
AC009509.3-201ENST00000542428 TFCP2Q12800 502 aa12.93□□□□□ -0.34
AC009509.3-201ENST00000542428 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
AC009509.3-201ENST00000542428 AOC3Q16853 763 aa12.93□□□□□ -0.34
AC009509.3-201ENST00000542428 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
AC009509.3-201ENST00000542428 APBB1O00213 710 aa12.92□□□□□ -0.34
AC009509.3-201ENST00000542428 PPIP5K2O43314 1243 aa12.92□□□□□ -0.34
AC009509.3-201ENST00000542428 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
AC009509.3-201ENST00000542428 FGFR2P21802 821 aa12.92□□□□□ -0.34
AC009509.3-201ENST00000542428 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms