RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 INTS3Q68E01 1043 aaKnown RBP3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 CIAPIN1Q6FI81 312 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 CNTROBQ8N137 903 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 TSC1Q92574 1164 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 ZNF592Q92610 1267 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 ACSBG1Q96GR2 724 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 DCAF5Q96JK2 942 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 KLF16Q9BXK1 252 aaPredicted RBP3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 TBC1D2Q9BYX2 928 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 PIM2Q9P1W9 311 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 NSFL1CQ9UNZ2 370 aaKnown RBP3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 MUC6Q6W4X9 2439 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 LTBP1Q14766 1721 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 FMN2Q9NZ56 1722 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 BDP1A6H8Y1 2624 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 ARHGEF5Q12774 1597 aa3.55□□□□□ -1.84
TRAV1-1-201ENST00000542354 PIK3R2O00459 728 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 F12P00748 615 aaPredicted RBP3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 DPEP1P16444 411 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 MRE11P49959 708 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 NBPF1Q3BBV0 1214 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 NBPF20Q3BBV1 942 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 RIC3Q7Z5B4 369 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 CNTNAP3BQ96NU0 1288 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 C1QTNF1Q9BXJ1 281 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 CNTNAP3Q9BZ76 1288 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 ZFAND3Q9H8U3 227 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 MTMR10Q9NXD2 777 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 SAGE1Q9NXZ1 904 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 HDAC9Q9UKV0 1011 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 ADAMTS8Q9UP79 889 aa3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 EIF2AK4Q9P2K8 1649 aaKnown RBP3.54□□□□□ -1.84
TRAV1-1-201ENST00000542354 KIF1AQ12756 1690 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 KIF7Q2M1P5 1343 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 LRRC37A3O60309 1634 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 NRXN3Q9Y4C0 1643 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 MAGEB6P1A0A0J9YX57 407 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 SOX1O00570 391 aaPredicted RBP3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 KCNQ4P56696 695 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 PTSQ03393 145 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 FOXJ1Q92949 421 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 C1QTNF2Q9BXJ5 285 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 DDX21Q9NR30 783 aaKnown RBP eCLIP3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 MAP10Q9P2G4 905 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 DNMT3LQ9UJW3 386 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 CDC42BPGQ6DT37 1551 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 MYO5BQ9ULV0 1848 aa3.53□□□□□ -1.84
TRAV1-1-201ENST00000542354 EEA1Q15075 1411 aa3.53□□□□□ -1.85
TRAV1-1-201ENST00000542354 THSD7BQ9C0I4 1608 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 MUC3AQ02505 3323 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 CDC14CA4D256 554 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 SOBPA7XYQ1 873 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 SPINT1O43278 529 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 NR3C2P08235 984 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 SLURP2P0DP57 97 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 ITGA6P23229 1130 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 GRM5P41594 1212 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 PTK2Q05397 1052 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 NOGQ13253 232 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 EAPPQ56P03 285 aaPredicted RBP3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 GPAT2Q6NUI2 795 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 PDXDC2PQ6P474 469 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 FBXO46Q6PJ61 603 aaPredicted RBP3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 TOM1L2Q6ZVM7 507 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 ZBTB33Q86T24 672 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 CCDC155Q8N6L0 562 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 ARHGAP9Q9BRR9 750 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 TAF1DQ9H5J8 278 aaPredicted RBP3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 GPSM3Q9Y4H4 160 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 KIAA0100Q14667 2235 aaKnown RBP3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 BRCA2P51587 3418 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 ANKRD11Q6UB99 2663 aaPredicted RBP3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 NCOR1O75376 2440 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 CRB1P82279 1406 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 NAIPQ13075 1403 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 CASKIN1Q8WXD9 1431 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 ZDBF2Q9HCK1 2354 aa3.52□□□□□ -1.85
TRAV1-1-201ENST00000542354 GPRASP1Q5JY77 1395 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 COL18A1P39060 1754 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 RPTORQ8N122 1335 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 CFAP99D6REC4 459 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 H7C1W4 665 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 TRPA1O75762 1119 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 KRT37O76014 449 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 EN2P19622 333 aaPredicted RBP3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 KCNA3P22001 575 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 IRS1P35568 1242 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 SRSF11Q05519 484 aaKnown RBP3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 ZNF326Q5BKZ1 582 aaKnown RBP3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 Q6ZVU0 165 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 Q7L0L9 218 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 SH3RF1Q7Z6J0 888 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 PNMA8AQ86V59 439 aaPredicted RBP3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 BEND7Q8N7W2 519 aaPredicted RBP3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 GALNT6Q8NCL4 622 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 HHIPL1Q96JK4 782 aa3.51□□□□□ -1.85
TRAV1-1-201ENST00000542354 AK7Q96M32 723 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms