RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CDC5LQ99459 802 aaKnown RBP34.21■■■■□ 3.07
CCM2-218ENST00000541586 ANKRD18AQ8IVF6 992 aa34.21■■■■□ 3.07
CCM2-218ENST00000541586 RHPN1Q8TCX5 695 aa34.21■■■■□ 3.07
CCM2-218ENST00000541586 TAF1P21675 1872 aa34.2■■■■□ 3.07
CCM2-218ENST00000541586 KIF1BPQ96EK5 621 aa34.2■■■■□ 3.07
CCM2-218ENST00000541586 BCS1LQ9Y276 419 aa34.2■■■■□ 3.07
CCM2-218ENST00000541586 DALRD3Q5D0E6 543 aaKnown RBP34.19■■■■□ 3.06
CCM2-218ENST00000541586 PRPF40BQ6NWY9 871 aaKnown RBP34.19■■■■□ 3.06
CCM2-218ENST00000541586 IGHMBP2P38935 993 aaKnown RBP34.18■■■■□ 3.06
CCM2-218ENST00000541586 RFX5P48382 616 aaPredicted RBP34.18■■■■□ 3.06
CCM2-218ENST00000541586 OS9Q13438 667 aaPredicted RBP34.18■■■■□ 3.06
CCM2-218ENST00000541586 MPHOSPH8Q99549 860 aa34.18■■■■□ 3.06
CCM2-218ENST00000541586 RTL9Q8NET4 1388 aa34.18■■■■□ 3.06
CCM2-218ENST00000541586 BBOX1O75936 387 aa34.18■■■■□ 3.06
CCM2-218ENST00000541586 IL1RAPL2Q9NP60 686 aa34.17■■■■□ 3.06
CCM2-218ENST00000541586 COPRSQ9NQ92 184 aa34.16■■■■□ 3.06
CCM2-218ENST00000541586 KIAA1551Q9HCM1 1747 aa34.16■■■■□ 3.06
CCM2-218ENST00000541586 PPEF1O14829 653 aaPredicted RBP34.16■■■■□ 3.06
CCM2-218ENST00000541586 ERC1Q8IUD2 1116 aa34.16■■■■□ 3.06
CCM2-218ENST00000541586 PTPN12Q05209 780 aaKnown RBP34.15■■■■□ 3.06
CCM2-218ENST00000541586 G3BP1Q13283 466 aaKnown RBP eCLIP34.15■■■■□ 3.06
CCM2-218ENST00000541586 BMP2KLQ5H9B9 411 aa34.15■■■■□ 3.06
CCM2-218ENST00000541586 LDHAL6AQ6ZMR3 332 aa34.15■■■■□ 3.06
CCM2-218ENST00000541586 SLC51AQ86UW1 340 aa34.15■■■■□ 3.06
CCM2-218ENST00000541586 UTRNP46939 3433 aa34.15■■■■□ 3.06
CCM2-218ENST00000541586 SIL1Q9H173 461 aa34.14■■■■□ 3.06
CCM2-218ENST00000541586 C21orf2O43822 256 aa34.13■■■■□ 3.05
CCM2-218ENST00000541586 OLFM4Q6UX06 510 aa34.13■■■■□ 3.05
CCM2-218ENST00000541586 SALL3Q9BXA9 1300 aa34.13■■■■□ 3.05
CCM2-218ENST00000541586 COL4A1P02462 1669 aa34.13■■■■□ 3.05
CCM2-218ENST00000541586 CNNM1Q9NRU3 951 aa34.13■■■■□ 3.05
CCM2-218ENST00000541586 PUS3Q9BZE2 481 aaKnown RBP34.12■■■■□ 3.05
CCM2-218ENST00000541586 CACNA1SQ13698 1873 aa34.11■■■■□ 3.05
CCM2-218ENST00000541586 TMX4Q9H1E5 349 aaPredicted RBP34.11■■■■□ 3.05
CCM2-218ENST00000541586 BSDC1Q9NW68 430 aaPredicted RBP34.11■■■■□ 3.05
CCM2-218ENST00000541586 SLX4Q8IY92 1834 aa34.11■■■■□ 3.05
CCM2-218ENST00000541586 PDE1AP54750 535 aa34.1■■■■□ 3.05
CCM2-218ENST00000541586 OSBPL3Q9H4L5 887 aa34.1■■■■□ 3.05
CCM2-218ENST00000541586 SASH1O94885 1247 aa34.1■■■■□ 3.05
CCM2-218ENST00000541586 LRRC24Q50LG9 513 aa34.1■■■■□ 3.05
CCM2-218ENST00000541586 TTC22Q5TAA0 569 aa34.1■■■■□ 3.05
CCM2-218ENST00000541586 DLEC1Q9Y238 1755 aa34.1■■■■□ 3.05
CCM2-218ENST00000541586 ATP6V0A2Q9Y487 856 aa34.09■■■■□ 3.05
CCM2-218ENST00000541586 GSPT1P15170 499 aaKnown RBP34.08■■■■□ 3.05
CCM2-218ENST00000541586 MX1P20591 662 aa34.08■■■■□ 3.05
CCM2-218ENST00000541586 SP8Q8IXZ3 490 aa34.07■■■■□ 3.05
CCM2-218ENST00000541586 GPR162Q16538 588 aa34.07■■■■□ 3.04
CCM2-218ENST00000541586 C7orf43Q8WVR3 580 aa34.07■■■■□ 3.04
CCM2-218ENST00000541586 TMC4Q7Z404 712 aa34.06■■■■□ 3.04
CCM2-218ENST00000541586 CLASRPQ8N2M8 674 aaKnown RBP34.06■■■■□ 3.04
CCM2-218ENST00000541586 STAP2Q9UGK3 403 aa34.06■■■■□ 3.04
CCM2-218ENST00000541586 MINPP1Q9UNW1 487 aa34.06■■■■□ 3.04
CCM2-218ENST00000541586 NSFL1CQ9UNZ2 370 aaKnown RBP34.04■■■■□ 3.04
CCM2-218ENST00000541586 BRCA1P38398 1863 aaKnown RBP34.04■■■■□ 3.04
CCM2-218ENST00000541586 EYA2O00167 538 aa34.04■■■■□ 3.04
CCM2-218ENST00000541586 HELBQ8NG08 1087 aaPredicted RBP34.04■■■■□ 3.04
CCM2-218ENST00000541586 ANKIB1Q9P2G1 1089 aa34.04■■■■□ 3.04
CCM2-218ENST00000541586 RIPOR2Q9Y4F9 1068 aa34.04■■■■□ 3.04
CCM2-218ENST00000541586 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.04■■■■□ 3.04
CCM2-218ENST00000541586 YBX3P16989 372 aaKnown RBP eCLIP34.03■■■■□ 3.042e-6■■□□□ 12.1
CCM2-218ENST00000541586 TSHZ3Q63HK5 1081 aa34.03■■■■□ 3.04
CCM2-218ENST00000541586 SPEF2Q9C093 1822 aa34.03■■■■□ 3.04
CCM2-218ENST00000541586 CHRNDQ07001 517 aa34.02■■■■□ 3.04
CCM2-218ENST00000541586 TAF5LO75529 589 aa34.01■■■■□ 3.03
CCM2-218ENST00000541586 METTL24Q5JXM2 366 aa34.01■■■■□ 3.03
CCM2-218ENST00000541586 GPSM2P81274 684 aa34■■■■□ 3.03
CCM2-218ENST00000541586 CCDC93Q567U6 631 aa34■■■■□ 3.03
CCM2-218ENST00000541586 ATG9AQ7Z3C6 839 aa34■■■■□ 3.03
CCM2-218ENST00000541586 AOX1Q06278 1338 aa34■■■■□ 3.03
CCM2-218ENST00000541586 MPNDQ8N594 471 aa33.99■■■■□ 3.03
CCM2-218ENST00000541586 SOGA3Q5TF21 947 aa33.99■■■■□ 3.03
CCM2-218ENST00000541586 AACSQ86V21 672 aa33.99■■■■□ 3.03
CCM2-218ENST00000541586 CIAO1O76071 339 aa33.98■■■■□ 3.03
CCM2-218ENST00000541586 SEC24BO95487 1268 aa33.98■■■■□ 3.03
CCM2-218ENST00000541586 IL15P40933 162 aaPredicted RBP33.98■■■■□ 3.03
CCM2-218ENST00000541586 CC2D2BQ6DHV5 1058 aa33.98■■■■□ 3.03
CCM2-218ENST00000541586 DPP8Q6V1X1 898 aaPredicted RBP33.98■■■■□ 3.03
CCM2-218ENST00000541586 ARHGAP27Q6ZUM4 889 aa33.98■■■■□ 3.03
CCM2-218ENST00000541586 FBXO3Q9UK99 471 aa33.98■■■■□ 3.03
CCM2-218ENST00000541586 IFIT2P09913 472 aaKnown RBP33.97■■■■□ 3.03
CCM2-218ENST00000541586 TFCP2Q12800 502 aa33.97■■■■□ 3.03
CCM2-218ENST00000541586 EAF2Q96CJ1 260 aaPredicted RBP33.97■■■■□ 3.03
CCM2-218ENST00000541586 MROH5Q6ZUA9 1318 aa33.97■■■■□ 3.03
CCM2-218ENST00000541586 RTKN2Q8IZC4 609 aa33.96■■■■□ 3.03
CCM2-218ENST00000541586 ANKRD2Q9GZV1 360 aa33.96■■■■□ 3.03
CCM2-218ENST00000541586 SDSP20132 328 aa33.96■■■■□ 3.03
CCM2-218ENST00000541586 WTIPA6NIX2 430 aaPredicted RBP33.95■■■■□ 3.03
CCM2-218ENST00000541586 SNAP23O00161 211 aa33.95■■■■□ 3.03
CCM2-218ENST00000541586 CEP126Q9P2H0 1117 aa33.95■■■■□ 3.03
CCM2-218ENST00000541586 C6orf229H3BNL8 230 aa33.94■■■■□ 3.02
CCM2-218ENST00000541586 XDHP47989 1333 aa33.94■■■■□ 3.02
CCM2-218ENST00000541586 PI4K2BQ8TCG2 481 aa33.93■■■■□ 3.02
CCM2-218ENST00000541586 GGA1Q9UJY5 639 aa33.93■■■■□ 3.02
CCM2-218ENST00000541586 KCNJ4P48050 445 aa33.93■■■■□ 3.02
CCM2-218ENST00000541586 TTC41PQ6P2S7 1318 aa33.93■■■■□ 3.02
CCM2-218ENST00000541586 UFL1O94874 794 aa33.92■■■■□ 3.02
CCM2-218ENST00000541586 CCDC8Q9H0W5 538 aaPredicted RBP33.92■■■■□ 3.02
CCM2-218ENST00000541586 POLLQ9UGP5 575 aa33.92■■■■□ 3.02
CCM2-218ENST00000541586 PDE8BO95263 885 aa33.91■■■■□ 3.02
CCM2-218ENST00000541586 TNNI3KQ59H18 835 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms