RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.14
SNHG1-216ENST00000541416 KIF4BQ2VIQ3 1234 aa15.92■□□□□ 0.14
SNHG1-216ENST00000541416 TBC1D16Q8TBP0 767 aa15.92■□□□□ 0.14
SNHG1-216ENST00000541416 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
SNHG1-216ENST00000541416 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
SNHG1-216ENST00000541416 GOLGA2Q08379 1002 aa15.91■□□□□ 0.14
SNHG1-216ENST00000541416 DOK7Q18PE1 504 aa15.91■□□□□ 0.14
SNHG1-216ENST00000541416 RUNDC1Q96C34 613 aa15.91■□□□□ 0.14
SNHG1-216ENST00000541416 PODXL2Q9NZ53 605 aa15.91■□□□□ 0.14
SNHG1-216ENST00000541416 FAM155AB1AL88 458 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-216ENST00000541416 VIL1P09327 827 aaKnown RBP15.9■□□□□ 0.14
SNHG1-216ENST00000541416 KIF23Q02241 960 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-216ENST00000541416 KRT24Q2M2I5 525 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-216ENST00000541416 RIC3Q7Z5B4 369 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 CHMP4AQ9BY43 222 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 GGA3Q9NZ52 723 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 GGA1Q9UJY5 639 aa15.9■□□□□ 0.14
SNHG1-216ENST00000541416 TNRC18O15417 2968 aaPredicted RBP15.9■□□□□ 0.14
SNHG1-216ENST00000541416 POLR2AP24928 1970 aaKnown RBP15.89■□□□□ 0.13
SNHG1-216ENST00000541416 ADM5C9JUS6 153 aa15.89■□□□□ 0.13
SNHG1-216ENST00000541416 UFL1O94874 794 aa15.89■□□□□ 0.13
SNHG1-216ENST00000541416 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.13
SNHG1-216ENST00000541416 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
SNHG1-216ENST00000541416 AGBL3Q8NEM8 1001 aa15.89■□□□□ 0.13
SNHG1-216ENST00000541416 ZIC5Q96T25 663 aa15.89■□□□□ 0.13
SNHG1-216ENST00000541416 AKAP11Q9UKA4 1901 aa15.89■□□□□ 0.13
SNHG1-216ENST00000541416 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
SNHG1-216ENST00000541416 TRPA1O75762 1119 aa15.88■□□□□ 0.13
SNHG1-216ENST00000541416 EGFRP00533 1210 aa15.88■□□□□ 0.13
SNHG1-216ENST00000541416 FKBP1BP68106 108 aa15.88■□□□□ 0.13
SNHG1-216ENST00000541416 DUSP27Q5VZP5 1158 aa15.88■□□□□ 0.13
SNHG1-216ENST00000541416 MYBBP1AQ9BQG0 1328 aaKnown RBP15.88■□□□□ 0.13
SNHG1-216ENST00000541416 SLC10A3P09131 477 aa15.87■□□□□ 0.13
SNHG1-216ENST00000541416 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
SNHG1-216ENST00000541416 DLK2Q6UY11 383 aa15.87■□□□□ 0.13
SNHG1-216ENST00000541416 KCNQ5Q9NR82 932 aa15.87■□□□□ 0.13
SNHG1-216ENST00000541416 RNF186Q9NXI6 227 aa15.87■□□□□ 0.13
SNHG1-216ENST00000541416 PCDH10Q9P2E7 1040 aa15.87■□□□□ 0.13
SNHG1-216ENST00000541416 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
SNHG1-216ENST00000541416 ZNF609O15014 1411 aa15.86■□□□□ 0.13
SNHG1-216ENST00000541416 ZNF280AP59817 542 aaPredicted RBP15.86■□□□□ 0.13
SNHG1-216ENST00000541416 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
SNHG1-216ENST00000541416 CCDC191Q8NCU4 936 aa15.86■□□□□ 0.13
SNHG1-216ENST00000541416 CDCA5Q96FF9 252 aa15.86■□□□□ 0.13
SNHG1-216ENST00000541416 PDE8AO60658 829 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
SNHG1-216ENST00000541416 USP17L8P0C7I0 530 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 SCARF1Q14162 830 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 ANGEL2Q5VTE6 544 aaKnown RBP15.85■□□□□ 0.13
SNHG1-216ENST00000541416 PODNQ7Z5L7 613 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 CTU1Q7Z7A3 348 aaKnown RBP15.85■□□□□ 0.13
SNHG1-216ENST00000541416 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 CSRNP1Q96S65 589 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 XDHP47989 1333 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
SNHG1-216ENST00000541416 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
SNHG1-216ENST00000541416 ATP2B4P23634 1241 aa15.84■□□□□ 0.13
SNHG1-216ENST00000541416 MYD88Q99836 296 aa15.84■□□□□ 0.13
SNHG1-216ENST00000541416 CWC25Q9NXE8 425 aaPredicted RBP15.84■□□□□ 0.13
SNHG1-216ENST00000541416 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 GNAI1P63096 354 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 PKN2Q16513 984 aaKnown RBP15.83■□□□□ 0.12
SNHG1-216ENST00000541416 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 OGFOD1Q8N543 542 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 CDC5LQ99459 802 aaKnown RBP15.83■□□□□ 0.12
SNHG1-216ENST00000541416 MYOZ2Q9NPC6 264 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 SEC31BQ9NQW1 1179 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 MBIPQ9NS73 344 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 SCN9AQ15858 1988 aa15.83■□□□□ 0.12
SNHG1-216ENST00000541416 PAPPA2Q9BXP8 1791 aa15.82■□□□□ 0.12
SNHG1-216ENST00000541416 NF2P35240 595 aa15.82■□□□□ 0.12
SNHG1-216ENST00000541416 MMP14P50281 582 aa15.82■□□□□ 0.12
SNHG1-216ENST00000541416 SOX10P56693 466 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 PSME4Q14997 1843 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 RASAL3Q86YV0 1011 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 MYO3BQ8WXR4 1341 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 IFT57Q9NWB7 429 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 HDAC9Q9UKV0 1011 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 ADAMTS8Q9UP79 889 aa15.81■□□□□ 0.12
SNHG1-216ENST00000541416 ASTN2O75129 1339 aaPredicted RBP15.8■□□□□ 0.12
SNHG1-216ENST00000541416 TTLL12Q14166 644 aaPredicted RBP15.8■□□□□ 0.12
SNHG1-216ENST00000541416 CCDC30Q5VVM6 783 aa15.8■□□□□ 0.12
SNHG1-216ENST00000541416 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
SNHG1-216ENST00000541416 CCDC85AQ96PX6 553 aaPredicted RBP15.79■□□□□ 0.12
SNHG1-216ENST00000541416 GMLQ99445 158 aa15.79■□□□□ 0.12
SNHG1-216ENST00000541416 METTL22Q9BUU2 404 aaPredicted RBP15.79■□□□□ 0.12
SNHG1-216ENST00000541416 COL4A1P02462 1669 aa15.79■□□□□ 0.12
SNHG1-216ENST00000541416 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
SNHG1-216ENST00000541416 ELL2O00472 640 aaPredicted RBP15.78■□□□□ 0.12
SNHG1-216ENST00000541416 ZNF853P0CG23 659 aa15.78■□□□□ 0.12
SNHG1-216ENST00000541416 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
SNHG1-216ENST00000541416 SREBF2Q12772 1141 aa15.78■□□□□ 0.12
SNHG1-216ENST00000541416 PDE4DIPQ5VU43 2346 aa15.77■□□□□ 0.12
SNHG1-216ENST00000541416 CTSWP56202 376 aa15.77■□□□□ 0.12
SNHG1-216ENST00000541416 DDX10Q13206 875 aaKnown RBP15.77■□□□□ 0.12
SNHG1-216ENST00000541416 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms