RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
SMAD3-204ENST00000540846 SIL1Q9H173 461 aa15.3■□□□□ 0.04
SMAD3-204ENST00000540846 ARAP2Q8WZ64 1704 aa15.3■□□□□ 0.04
SMAD3-204ENST00000540846 EYA2O00167 538 aa15.29■□□□□ 0.04
SMAD3-204ENST00000540846 SRGNP10124 158 aa15.29■□□□□ 0.04
SMAD3-204ENST00000540846 RHPN1Q8TCX5 695 aa15.29■□□□□ 0.04
SMAD3-204ENST00000540846 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
SMAD3-204ENST00000540846 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
SMAD3-204ENST00000540846 RIPOR2Q9Y4F9 1068 aa15.29■□□□□ 0.04
SMAD3-204ENST00000540846 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
SMAD3-204ENST00000540846 SLX4Q8IY92 1834 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 SDSP20132 328 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 PDE6BP35913 854 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 VGLL2Q8N8G2 317 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 CDC5LQ99459 802 aaKnown RBP15.28■□□□□ 0.04
SMAD3-204ENST00000540846 C22orf23Q9BZE7 217 aa15.28■□□□□ 0.04
SMAD3-204ENST00000540846 LDHAL6AQ6ZMR3 332 aa15.27■□□□□ 0.03
SMAD3-204ENST00000540846 ERC1Q8IUD2 1116 aa15.27■□□□□ 0.03
SMAD3-204ENST00000540846 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.03
SMAD3-204ENST00000540846 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
SMAD3-204ENST00000540846 ZNF609O15014 1411 aa15.26■□□□□ 0.03
SMAD3-204ENST00000540846 POLD1P28340 1107 aa15.26■□□□□ 0.03
SMAD3-204ENST00000540846 IL15P40933 162 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-204ENST00000540846 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
SMAD3-204ENST00000540846 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMAD3-204ENST00000540846 GRAPQ13588 217 aa15.26■□□□□ 0.03
SMAD3-204ENST00000540846 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
SMAD3-204ENST00000540846 GRAPLQ8TC17 118 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-204ENST00000540846 RPGRQ92834 1020 aaKnown RBP15.26■□□□□ 0.03
SMAD3-204ENST00000540846 IL1RAPL2Q9NP60 686 aa15.26■□□□□ 0.03
SMAD3-204ENST00000540846 NPR1P16066 1061 aa15.25■□□□□ 0.03
SMAD3-204ENST00000540846 CHRNA5P30532 468 aa15.25■□□□□ 0.03
SMAD3-204ENST00000540846 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
SMAD3-204ENST00000540846 TFCP2Q12800 502 aa15.25■□□□□ 0.03
SMAD3-204ENST00000540846 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
SMAD3-204ENST00000540846 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
SMAD3-204ENST00000540846 BSDC1Q9NW68 430 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-204ENST00000540846 KCNA3P22001 575 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-204ENST00000540846 C2CD5Q86YS7 1000 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 IGHMBP2P38935 993 aaKnown RBP15.24■□□□□ 0.03
SMAD3-204ENST00000540846 STYK1Q6J9G0 422 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 CASC1Q6TDU7 716 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 MASTLQ96GX5 879 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
SMAD3-204ENST00000540846 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 CNNM1Q9NRU3 951 aa15.24■□□□□ 0.03
SMAD3-204ENST00000540846 SNED1Q8TER0 1413 aa15.23■□□□□ 0.03
SMAD3-204ENST00000540846 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
SMAD3-204ENST00000540846 EAF2Q96CJ1 260 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-204ENST00000540846 MPHOSPH8Q99549 860 aa15.23■□□□□ 0.03
SMAD3-204ENST00000540846 GPR108Q9NPR9 543 aa15.23■□□□□ 0.03
SMAD3-204ENST00000540846 MINPP1Q9UNW1 487 aa15.23■□□□□ 0.03
SMAD3-204ENST00000540846 TTC41PQ6P2S7 1318 aa15.22■□□□□ 0.03
SMAD3-204ENST00000540846 MROH5Q6ZUA9 1318 aa15.22■□□□□ 0.03
SMAD3-204ENST00000540846 H0YIN7 160 aa15.22■□□□□ 0.03
SMAD3-204ENST00000540846 CHRNDQ07001 517 aa15.22■□□□□ 0.03
SMAD3-204ENST00000540846 CLASRPQ8N2M8 674 aaKnown RBP15.22■□□□□ 0.03
SMAD3-204ENST00000540846 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
SMAD3-204ENST00000540846 PDE8BO95263 885 aa15.21■□□□□ 0.03
SMAD3-204ENST00000540846 FGFR2P21802 821 aa15.21■□□□□ 0.03
SMAD3-204ENST00000540846 TNNI3KQ59H18 835 aa15.21■□□□□ 0.03
SMAD3-204ENST00000540846 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
SMAD3-204ENST00000540846 FPGT-TNNI3KV9GXZ4 949 aa15.21■□□□□ 0.03
SMAD3-204ENST00000540846 GOLGB1Q14789 3259 aaKnown RBP15.2■□□□□ 0.02
SMAD3-204ENST00000540846 BBOX1O75936 387 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 DPEP1P16444 411 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 TGFB2P61812 414 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 BECN1Q14457 450 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 METTL24Q5JXM2 366 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-204ENST00000540846 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
SMAD3-204ENST00000540846 CEP126Q9P2H0 1117 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 DAXXQ9UER7 740 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-204ENST00000540846 SRCAPQ6ZRS2 3230 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
SMAD3-204ENST00000540846 A0A0G2JLW4 131 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 WTIPA6NIX2 430 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-204ENST00000540846 SNAP23O00161 211 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 PRPF40BQ6NWY9 871 aaKnown RBP15.19■□□□□ 0.02
SMAD3-204ENST00000540846 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 DBNLQ9UJU6 430 aaKnown RBP15.19■□□□□ 0.02
SMAD3-204ENST00000540846 IRS2Q9Y4H2 1338 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 PPEF1O14829 653 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-204ENST00000540846 TAF5LO75529 589 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 TMC4Q7Z404 712 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMAD3-204ENST00000540846 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 ATP6V0A2Q9Y487 856 aa15.19■□□□□ 0.02
SMAD3-204ENST00000540846 A0A1B0GUL7 405 aa15.18■□□□□ 0.02
SMAD3-204ENST00000540846 GLRX3O76003 335 aaKnown RBP15.18■□□□□ 0.02
SMAD3-204ENST00000540846 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
SMAD3-204ENST00000540846 AACSQ86V21 672 aa15.18■□□□□ 0.02
SMAD3-204ENST00000540846 SP8Q8IXZ3 490 aa15.18■□□□□ 0.02
SMAD3-204ENST00000540846 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms