RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CCDC191Q8NCU4 936 aa20.99■□□□□ 0.95
TRIM65-203ENST00000540812 EYA3Q99504 573 aa20.99■□□□□ 0.95
TRIM65-203ENST00000540812 ZNF408Q9H9D4 720 aa20.99■□□□□ 0.95
TRIM65-203ENST00000540812 PCCAP05165 728 aaPredicted RBP20.98■□□□□ 0.95
TRIM65-203ENST00000540812 CCDC184Q52MB2 194 aa20.98■□□□□ 0.95
TRIM65-203ENST00000540812 CDC37L1Q7L3B6 337 aa20.98■□□□□ 0.95
TRIM65-203ENST00000540812 CCDC85AQ96PX6 553 aaPredicted RBP20.98■□□□□ 0.95
TRIM65-203ENST00000540812 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
TRIM65-203ENST00000540812 TBC1D10BQ4KMP7 808 aaPredicted RBP20.97■□□□□ 0.95
TRIM65-203ENST00000540812 METTL22Q9BUU2 404 aaPredicted RBP20.97■□□□□ 0.95
TRIM65-203ENST00000540812 PDE8AO60658 829 aa20.96■□□□□ 0.95
TRIM65-203ENST00000540812 UFL1O94874 794 aa20.96■□□□□ 0.95
TRIM65-203ENST00000540812 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
TRIM65-203ENST00000540812 CCDC30Q5VVM6 783 aa20.96■□□□□ 0.95
TRIM65-203ENST00000540812 PODXL2Q9NZ53 605 aa20.96■□□□□ 0.95
TRIM65-203ENST00000540812 DDX58O95786 925 aaKnown RBP20.95■□□□□ 0.94
TRIM65-203ENST00000540812 HSP90B1P14625 803 aaKnown RBP20.95■□□□□ 0.94
TRIM65-203ENST00000540812 RPS12P25398 132 aaKnown RBP20.95■□□□□ 0.94
TRIM65-203ENST00000540812 RBM26Q5T8P6 1007 aaKnown RBP20.95■□□□□ 0.94
TRIM65-203ENST00000540812 TSR2Q969E8 191 aaKnown RBP20.95■□□□□ 0.94
TRIM65-203ENST00000540812 ZC3H12CQ9C0D7 883 aaKnown RBP20.95■□□□□ 0.94
TRIM65-203ENST00000540812 ANKIB1Q9P2G1 1089 aa20.95■□□□□ 0.94
TRIM65-203ENST00000540812 GGA1Q9UJY5 639 aa20.95■□□□□ 0.94
TRIM65-203ENST00000540812 MAP3K2Q9Y2U5 619 aa20.95■□□□□ 0.94
TRIM65-203ENST00000540812 SCN9AQ15858 1988 aa20.94■□□□□ 0.94
TRIM65-203ENST00000540812 MAP2K2P36507 400 aa20.94■□□□□ 0.94
TRIM65-203ENST00000540812 BEGAINQ9BUH8 593 aa20.94■□□□□ 0.94
TRIM65-203ENST00000540812 TSKSQ9UJT2 592 aa20.94■□□□□ 0.94
TRIM65-203ENST00000540812 IGKV5-2P06315 115 aa20.93■□□□□ 0.94
TRIM65-203ENST00000540812 HHIPL1Q96JK4 782 aa20.93■□□□□ 0.94
TRIM65-203ENST00000540812 ADM5C9JUS6 153 aa20.92■□□□□ 0.94
TRIM65-203ENST00000540812 VIL1P09327 827 aaKnown RBP20.92■□□□□ 0.94
TRIM65-203ENST00000540812 KRT26Q7Z3Y9 468 aa20.92■□□□□ 0.94
TRIM65-203ENST00000540812 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
TRIM65-203ENST00000540812 KSR2Q6VAB6 950 aa20.91■□□□□ 0.94
TRIM65-203ENST00000540812 ANKRD18AQ8IVF6 992 aa20.91■□□□□ 0.94
TRIM65-203ENST00000540812 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
TRIM65-203ENST00000540812 ZIC5Q96T25 663 aa20.91■□□□□ 0.94
TRIM65-203ENST00000540812 ASTN2O75129 1339 aaPredicted RBP20.9■□□□□ 0.94
TRIM65-203ENST00000540812 G3V3G9 751 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 CTSWP56202 376 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 HUNKP57058 714 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 KIF4BQ2VIQ3 1234 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 DCAF8Q5TAQ9 597 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 ABHD8Q96I13 439 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
TRIM65-203ENST00000540812 XDHP47989 1333 aa20.89■□□□□ 0.93
TRIM65-203ENST00000540812 POLR2AP24928 1970 aaKnown RBP20.89■□□□□ 0.93
TRIM65-203ENST00000540812 WTIPA6NIX2 430 aaPredicted RBP20.89■□□□□ 0.93
TRIM65-203ENST00000540812 G2E3Q7L622 706 aa20.89■□□□□ 0.93
TRIM65-203ENST00000540812 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
TRIM65-203ENST00000540812 BRPF1P55201 1214 aaPredicted RBP20.88■□□□□ 0.93
TRIM65-203ENST00000540812 CCDC27Q2M243 656 aa20.88■□□□□ 0.93
TRIM65-203ENST00000540812 CWF19L2Q2TBE0 894 aaKnown RBP20.88■□□□□ 0.93
TRIM65-203ENST00000540812 RSBN1LQ6PCB5 846 aaPredicted RBP20.88■□□□□ 0.93
TRIM65-203ENST00000540812 TTLL11Q8NHH1 800 aa20.88■□□□□ 0.93
TRIM65-203ENST00000540812 DCPSQ96C86 337 aaKnown RBP20.88■□□□□ 0.93
TRIM65-203ENST00000540812 GREM2Q9H772 168 aa20.88■□□□□ 0.93
TRIM65-203ENST00000540812 ATP2B4P23634 1241 aa20.87■□□□□ 0.93
TRIM65-203ENST00000540812 ZNF280AP59817 542 aaPredicted RBP20.87■□□□□ 0.93
TRIM65-203ENST00000540812 TWISTNBQ3B726 338 aaPredicted RBP20.87■□□□□ 0.93
TRIM65-203ENST00000540812 STK31Q9BXU1 1019 aa20.87■□□□□ 0.93
TRIM65-203ENST00000540812 GBA2Q9HCG7 927 aaPredicted RBP20.87■□□□□ 0.93
TRIM65-203ENST00000540812 GGA3Q9NZ52 723 aa20.87■□□□□ 0.93
TRIM65-203ENST00000540812 NEURL1BA8MQ27 555 aa20.86■□□□□ 0.93
TRIM65-203ENST00000540812 CDC5LQ99459 802 aaKnown RBP20.86■□□□□ 0.93
TRIM65-203ENST00000540812 ZNF609O15014 1411 aa20.86■□□□□ 0.93
TRIM65-203ENST00000540812 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
TRIM65-203ENST00000540812 AGBL3Q8NEM8 1001 aa20.85■□□□□ 0.93
TRIM65-203ENST00000540812 GMLQ99445 158 aa20.85■□□□□ 0.93
TRIM65-203ENST00000540812 MINPP1Q9UNW1 487 aa20.85■□□□□ 0.93
TRIM65-203ENST00000540812 FAM155AB1AL88 458 aaPredicted RBP20.84■□□□□ 0.93
TRIM65-203ENST00000540812 CA12O43570 354 aa20.84■□□□□ 0.93
TRIM65-203ENST00000540812 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
TRIM65-203ENST00000540812 NOGQ13253 232 aa20.84■□□□□ 0.93
TRIM65-203ENST00000540812 RGMBQ6NW40 437 aa20.84■□□□□ 0.93
TRIM65-203ENST00000540812 SULF1Q8IWU6 871 aa20.84■□□□□ 0.93
TRIM65-203ENST00000540812 C2orf69Q8N8R5 385 aa20.84■□□□□ 0.93
TRIM65-203ENST00000540812 BSDC1Q9NW68 430 aaPredicted RBP20.84■□□□□ 0.93
TRIM65-203ENST00000540812 H7C1W4 665 aa20.83■□□□□ 0.93
TRIM65-203ENST00000540812 SCARF1Q14162 830 aa20.83■□□□□ 0.93
TRIM65-203ENST00000540812 UBE3BQ7Z3V4 1068 aa20.83■□□□□ 0.93
TRIM65-203ENST00000540812 CDCA5Q96FF9 252 aa20.83■□□□□ 0.93
TRIM65-203ENST00000540812 IL16Q14005 1332 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 USP17L3A6NCW0 530 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 USP17L4A6NCW7 530 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 ANGEL2Q5VTE6 544 aaKnown RBP20.82■□□□□ 0.92
TRIM65-203ENST00000540812 USP17L1Q7RTZ2 530 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 PODNQ7Z5L7 613 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 PSME4Q14997 1843 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 MED23Q9ULK4 1368 aa20.82■□□□□ 0.92
TRIM65-203ENST00000540812 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
TRIM65-203ENST00000540812 MYH3P11055 1940 aa20.81■□□□□ 0.92
TRIM65-203ENST00000540812 USP17L8P0C7I0 530 aa20.81■□□□□ 0.92
TRIM65-203ENST00000540812 FLIIQ13045 1269 aa20.81■□□□□ 0.92
TRIM65-203ENST00000540812 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
TRIM65-203ENST00000540812 MYOZ2Q9NPC6 264 aa20.81■□□□□ 0.92
TRIM65-203ENST00000540812 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
TRIM65-203ENST00000540812 CASP8AP2Q9UKL3 1982 aa20.8■□□□□ 0.92
TRIM65-203ENST00000540812 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms