RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 FUCA2Q9BTY2 467 aa16.68■□□□□ 0.26
INO80E-203ENST00000540562 NPHP4O75161 1426 aaPredicted RBP16.68■□□□□ 0.26
INO80E-203ENST00000540562 HIP1O00291 1037 aa16.67■□□□□ 0.26
INO80E-203ENST00000540562 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
INO80E-203ENST00000540562 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
INO80E-203ENST00000540562 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
INO80E-203ENST00000540562 MCMDC2Q4G0Z9 681 aa16.67■□□□□ 0.26
INO80E-203ENST00000540562 CCDC144CPQ8IYA2 1237 aa16.67■□□□□ 0.26
INO80E-203ENST00000540562 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
INO80E-203ENST00000540562 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
INO80E-203ENST00000540562 ADORA1P30542 326 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 ZNF165P49910 485 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 HSPA2P54652 639 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 FILIP1Q7Z7B0 1213 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 DENND2AQ9ULE3 1009 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 BIN1O00499 593 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 ME1P48163 572 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 RFX5P48382 616 aaPredicted RBP16.66■□□□□ 0.26
INO80E-203ENST00000540562 PTPN21Q16825 1174 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 FAM89AQ96GI7 184 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 PDCP20941 246 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
INO80E-203ENST00000540562 IFIT1P09914 478 aaKnown RBP16.65■□□□□ 0.26
INO80E-203ENST00000540562 NAA30Q147X3 362 aaPredicted RBP16.65■□□□□ 0.26
INO80E-203ENST00000540562 MEGF6O75095 1541 aa16.65■□□□□ 0.26
INO80E-203ENST00000540562 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
INO80E-203ENST00000540562 FAM200AQ8TCP9 573 aa16.65■□□□□ 0.26
INO80E-203ENST00000540562 MED23Q9ULK4 1368 aa16.64■□□□□ 0.26
INO80E-203ENST00000540562 IGSF3O75054 1194 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 ATP5JP18859 108 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 LETM1O95202 739 aaPredicted RBP16.64■□□□□ 0.25
INO80E-203ENST00000540562 CBX1P83916 185 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 ANKRD1Q15327 319 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 C11orf57Q6ZUT1 292 aaPredicted RBP16.64■□□□□ 0.25
INO80E-203ENST00000540562 USP28Q96RU2 1077 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 A0A1B0GUL7 405 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 NPHP1O15259 732 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 IL17RAQ96F46 866 aa16.64■□□□□ 0.25
INO80E-203ENST00000540562 CCAR1Q8IX12 1150 aaKnown RBP16.63■□□□□ 0.25
INO80E-203ENST00000540562 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
INO80E-203ENST00000540562 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
INO80E-203ENST00000540562 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
INO80E-203ENST00000540562 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
INO80E-203ENST00000540562 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
INO80E-203ENST00000540562 M0R2C6 588 aa16.63■□□□□ 0.25
INO80E-203ENST00000540562 SNAP23O00161 211 aa16.63■□□□□ 0.25
INO80E-203ENST00000540562 SCARF1Q14162 830 aa16.63■□□□□ 0.25
INO80E-203ENST00000540562 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
INO80E-203ENST00000540562 SCAND2PQ9GZW5 306 aaPredicted RBP16.63■□□□□ 0.25
INO80E-203ENST00000540562 A0A1B0GVL5 298 aa16.62■□□□□ 0.25
INO80E-203ENST00000540562 MCM5P33992 734 aa16.62■□□□□ 0.25
INO80E-203ENST00000540562 GOLPH3LQ9H4A5 285 aa16.62■□□□□ 0.25
INO80E-203ENST00000540562 APPP05067 770 aa16.62■□□□□ 0.25
INO80E-203ENST00000540562 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
INO80E-203ENST00000540562 HSPD1P10809 573 aaKnown RBP16.61■□□□□ 0.25
INO80E-203ENST00000540562 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
INO80E-203ENST00000540562 INCENPQ9NQS7 918 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 RGPD5Q99666 1765 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 E7EWF7 191 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 AIFM3Q96NN9 605 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 HAUS7Q99871 368 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
INO80E-203ENST00000540562 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
INO80E-203ENST00000540562 RESTQ13127 1097 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 KCNB2Q92953 911 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 OSBP2Q969R2 916 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 HEG1Q9ULI3 1381 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 BECN2A8MW95 431 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 GOLGA6L19H0YKK7 550 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 FOXO4P98177 505 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 NSUN7Q8NE18 718 aaKnown RBP16.6■□□□□ 0.25
INO80E-203ENST00000540562 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
INO80E-203ENST00000540562 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
INO80E-203ENST00000540562 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
INO80E-203ENST00000540562 UTYO14607 1347 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 MAST3O60307 1309 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 SF3A1Q15459 793 aaKnown RBP16.59■□□□□ 0.25
INO80E-203ENST00000540562 ZNF710Q8N1W2 664 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 HMG20BQ9P0W2 317 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 KIAA1524Q8TCG1 905 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 TTC39AQ5SRH9 613 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 DHX32Q7L7V1 743 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms