RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 CAPNS2Q96L46 248 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 PODXL2Q9NZ53 605 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 POLLQ9UGP5 575 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
UBE3B-211ENST00000539843 PI4KAP2A4QPH2 592 aa19.59■□□□□ 0.73
UBE3B-211ENST00000539843 PI4KAP1Q8N8J0 262 aa19.59■□□□□ 0.73
UBE3B-211ENST00000539843 ZNF408Q9H9D4 720 aa19.59■□□□□ 0.73
UBE3B-211ENST00000539843 SEC31BQ9NQW1 1179 aa19.59■□□□□ 0.73
UBE3B-211ENST00000539843 WBP1LQ9NX94 342 aa19.59■□□□□ 0.73
UBE3B-211ENST00000539843 XDHP47989 1333 aa19.58■□□□□ 0.73
UBE3B-211ENST00000539843 DOK7Q18PE1 504 aa19.58■□□□□ 0.72
UBE3B-211ENST00000539843 TSPYL6Q8N831 410 aa19.58■□□□□ 0.72
UBE3B-211ENST00000539843 TRPM4Q8TD43 1214 aa19.58■□□□□ 0.72
UBE3B-211ENST00000539843 CCDC85AQ96PX6 553 aaPredicted RBP19.58■□□□□ 0.72
UBE3B-211ENST00000539843 GLIS2Q9BZE0 524 aaPredicted RBP19.58■□□□□ 0.72
UBE3B-211ENST00000539843 PGAP2Q9UHJ9 254 aa19.58■□□□□ 0.72
UBE3B-211ENST00000539843 ZBTB12Q9Y330 459 aaPredicted RBP19.58■□□□□ 0.72
UBE3B-211ENST00000539843 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
UBE3B-211ENST00000539843 CTSWP56202 376 aa19.57■□□□□ 0.72
UBE3B-211ENST00000539843 GPR101Q96P66 508 aaPredicted RBP19.57■□□□□ 0.72
UBE3B-211ENST00000539843 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
UBE3B-211ENST00000539843 ATP2B4P23634 1241 aa19.56■□□□□ 0.72
UBE3B-211ENST00000539843 CST9Q5W186 159 aa19.56■□□□□ 0.72
UBE3B-211ENST00000539843 DCPSQ96C86 337 aaKnown RBP19.56■□□□□ 0.72
UBE3B-211ENST00000539843 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
UBE3B-211ENST00000539843 TAF1P21675 1872 aa19.55■□□□□ 0.72
UBE3B-211ENST00000539843 FMR1Q06787 632 aaKnown RBP eCLIP19.55■□□□□ 0.72
UBE3B-211ENST00000539843 CYP4F22Q6NT55 531 aa19.55■□□□□ 0.72
UBE3B-211ENST00000539843 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
UBE3B-211ENST00000539843 HHIPL1Q96JK4 782 aa19.55■□□□□ 0.72
UBE3B-211ENST00000539843 MAP2K2P36507 400 aa19.54■□□□□ 0.72
UBE3B-211ENST00000539843 IGHMBP2P38935 993 aaKnown RBP19.54■□□□□ 0.72
UBE3B-211ENST00000539843 HIRAP54198 1017 aaPredicted RBP19.54■□□□□ 0.72
UBE3B-211ENST00000539843 FKBP5Q13451 457 aaPredicted RBP19.54■□□□□ 0.72
UBE3B-211ENST00000539843 TBC1D10BQ4KMP7 808 aaPredicted RBP19.54■□□□□ 0.72
UBE3B-211ENST00000539843 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
UBE3B-211ENST00000539843 SAMD7Q7Z3H4 446 aa19.54■□□□□ 0.72
UBE3B-211ENST00000539843 SAPCD2Q86UD0 394 aa19.54■□□□□ 0.72
UBE3B-211ENST00000539843 WDR63Q8IWG1 891 aa19.54■□□□□ 0.72
UBE3B-211ENST00000539843 NEURL1BA8MQ27 555 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 IGKV5-2P06315 115 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 LBX1P52954 281 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 FLIIQ13045 1269 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 KIF4BQ2VIQ3 1234 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 RBM26Q5T8P6 1007 aaKnown RBP19.53■□□□□ 0.72
UBE3B-211ENST00000539843 KRT26Q7Z3Y9 468 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 USP48Q86UV5 1035 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 TRPM7Q96QT4 1865 aa19.53■□□□□ 0.72
UBE3B-211ENST00000539843 VIL1P09327 827 aaKnown RBP19.52■□□□□ 0.72
UBE3B-211ENST00000539843 CWF19L2Q2TBE0 894 aaKnown RBP19.52■□□□□ 0.72
UBE3B-211ENST00000539843 UBE3BQ7Z3V4 1068 aa19.52■□□□□ 0.72
UBE3B-211ENST00000539843 PODNQ7Z5L7 613 aa19.52■□□□□ 0.72
UBE3B-211ENST00000539843 SULF1Q8IWU6 871 aa19.52■□□□□ 0.72
UBE3B-211ENST00000539843 AGBL3Q8NEM8 1001 aa19.52■□□□□ 0.72
UBE3B-211ENST00000539843 BSDC1Q9NW68 430 aaPredicted RBP19.52■□□□□ 0.72
UBE3B-211ENST00000539843 RTL9Q8NET4 1388 aa19.52■□□□□ 0.72
UBE3B-211ENST00000539843 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
UBE3B-211ENST00000539843 SHTN1A0MZ66 631 aa19.51■□□□□ 0.71
UBE3B-211ENST00000539843 CA12O43570 354 aa19.51■□□□□ 0.71
UBE3B-211ENST00000539843 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
UBE3B-211ENST00000539843 DNAAF4Q8WXU2 420 aa19.51■□□□□ 0.71
UBE3B-211ENST00000539843 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
UBE3B-211ENST00000539843 HSPA8P11142 646 aaKnown RBP19.5■□□□□ 0.71
UBE3B-211ENST00000539843 RSBN1LQ6PCB5 846 aaPredicted RBP19.5■□□□□ 0.71
UBE3B-211ENST00000539843 C2orf69Q8N8R5 385 aa19.5■□□□□ 0.71
UBE3B-211ENST00000539843 MPHOSPH8Q99549 860 aa19.5■□□□□ 0.71
UBE3B-211ENST00000539843 GREM2Q9H772 168 aa19.5■□□□□ 0.71
UBE3B-211ENST00000539843 MED23Q9ULK4 1368 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 PCNTO95613 3336 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 USP17L3A6NCW0 530 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 USP17L4A6NCW7 530 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 HUNKP57058 714 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 GCKRQ14397 625 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 USP17L1Q7RTZ2 530 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 LINS1Q8NG48 757 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 ANKRD2Q9GZV1 360 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 KCNQ5Q9NR82 932 aa19.49■□□□□ 0.71
UBE3B-211ENST00000539843 H7C1W4 665 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 KCNJ4P48050 445 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 NOGQ13253 232 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 G2E3Q7L622 706 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 GBA2Q9HCG7 927 aaPredicted RBP19.48■□□□□ 0.71
UBE3B-211ENST00000539843 GGA3Q9NZ52 723 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 MINPP1Q9UNW1 487 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 LEMD3Q9Y2U8 911 aa19.48■□□□□ 0.71
UBE3B-211ENST00000539843 THSD7BQ9C0I4 1608 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 COL4A1P02462 1669 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 USP17L8P0C7I0 530 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
UBE3B-211ENST00000539843 BRPF1P55201 1214 aaPredicted RBP19.47■□□□□ 0.71
UBE3B-211ENST00000539843 OGFOD1Q8N543 542 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 FBXW7Q969H0 707 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 PLA2G12BQ9BX93 195 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 ZNF609O15014 1411 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 MYO3BQ8WXR4 1341 aa19.47■□□□□ 0.71
UBE3B-211ENST00000539843 AOC2O75106 756 aa19.46■□□□□ 0.71
UBE3B-211ENST00000539843 ITGA6P23229 1130 aa19.46■□□□□ 0.71
UBE3B-211ENST00000539843 COA1Q9GZY4 146 aa19.46■□□□□ 0.71
UBE3B-211ENST00000539843 ANKRD18BA2A2Z9 1011 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms