RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PHF14O94880 888 aa21.34■■□□□ 1.01
GNE-204ENST00000539208 CSPP1Q1MSJ5 1256 aa21.34■■□□□ 1.01
GNE-204ENST00000539208 FOXD4L6Q3SYB3 417 aaPredicted RBP21.34■■□□□ 1.01
GNE-204ENST00000539208 FOXD4L3Q6VB84 417 aaPredicted RBP21.34■■□□□ 1.01
GNE-204ENST00000539208 CCDC129Q6ZRS4 1044 aa21.34■■□□□ 1.01
GNE-204ENST00000539208 TRIM44Q96DX7 344 aaPredicted RBP21.34■■□□□ 1.01
GNE-204ENST00000539208 TCHHQ07283 1943 aa21.34■■□□□ 1.01
GNE-204ENST00000539208 IFIT1P09914 478 aaKnown RBP21.33■■□□□ 1.01
GNE-204ENST00000539208 HSP90AB3PQ58FF7 597 aa21.33■■□□□ 1.01
GNE-204ENST00000539208 KLHL34Q8N239 644 aa21.33■■□□□ 1.01
GNE-204ENST00000539208 CHGBP05060 677 aa21.33■■□□□ 1
GNE-204ENST00000539208 CYP21A2P08686 494 aa21.33■■□□□ 1
GNE-204ENST00000539208 UBE2HP62256 183 aa21.33■■□□□ 1
GNE-204ENST00000539208 CYP19A1P11511 503 aaPredicted RBP21.32■■□□□ 1
GNE-204ENST00000539208 ZNF330Q9Y3S2 320 aaPredicted RBP21.32■■□□□ 1
GNE-204ENST00000539208 RNF113AO15541 343 aaKnown RBP21.31■■□□□ 1
GNE-204ENST00000539208 HMGB1P09429 215 aaKnown RBP21.31■■□□□ 1
GNE-204ENST00000539208 LARP1BQ659C4 914 aaKnown RBP21.31■■□□□ 1
GNE-204ENST00000539208 FAM89AQ96GI7 184 aa21.31■■□□□ 1
GNE-204ENST00000539208 AHDC1Q5TGY3 1603 aaPredicted RBP21.31■■□□□ 1
GNE-204ENST00000539208 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
GNE-204ENST00000539208 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.3■■□□□ 1
GNE-204ENST00000539208 EXOC5O00471 708 aa21.3■■□□□ 1
GNE-204ENST00000539208 CLCN1P35523 988 aa21.3■■□□□ 1
GNE-204ENST00000539208 IFIT5Q13325 482 aaKnown RBP21.3■■□□□ 1
GNE-204ENST00000539208 LRRFIP1Q32MZ4 808 aaKnown RBP21.3■■□□□ 1
GNE-204ENST00000539208 CCDC158Q5M9N0 1113 aa21.3■■□□□ 1
GNE-204ENST00000539208 TCEANC2Q96MN5 208 aa21.3■■□□□ 1
GNE-204ENST00000539208 COL16A1Q07092 1604 aaPredicted RBP21.3■■□□□ 1
GNE-204ENST00000539208 ABCC12Q96J65 1359 aa21.3■■□□□ 1
GNE-204ENST00000539208 ESPNB1AK53 854 aa21.3■■□□□ 1
GNE-204ENST00000539208 NLRP10Q86W26 655 aa21.3■■□□□ 1
GNE-204ENST00000539208 SLC4A9Q96Q91 983 aa21.3■■□□□ 1
GNE-204ENST00000539208 WNK3Q9BYP7 1800 aa21.29■■□□□ 1
GNE-204ENST00000539208 ANKRD36CQ5JPF3 1778 aa21.29■■□□□ 1
GNE-204ENST00000539208 LETM1O95202 739 aaPredicted RBP21.29■■□□□ 1
GNE-204ENST00000539208 HLFQ16534 295 aa21.29■■□□□ 1
GNE-204ENST00000539208 PDLIM2Q96JY6 352 aa21.29■■□□□ 1
GNE-204ENST00000539208 ROBO1Q9Y6N7 1651 aa21.28■■□□□ 1
GNE-204ENST00000539208 VPS37CA5D8V6 355 aaPredicted RBP21.28■■□□□ 1
GNE-204ENST00000539208 CCDC183Q5T5S1 534 aa21.28■■□□□ 1
GNE-204ENST00000539208 GTF3C6Q969F1 213 aa21.28■■□□□ 1
GNE-204ENST00000539208 XAGE2Q96GT9 111 aa21.28■■□□□ 1
GNE-204ENST00000539208 TSPY26PQ9H489 355 aa21.28■■□□□ 1
GNE-204ENST00000539208 ERVV-1B6SEH8 477 aa21.27■■□□□ 1
GNE-204ENST00000539208 DNM1Q05193 864 aaKnown RBP21.27■■□□□ 1
GNE-204ENST00000539208 Q6ZUG5 572 aa21.27■■□□□ 1
GNE-204ENST00000539208 ZFYP08048 801 aaPredicted RBP21.27■■□□□ 1
GNE-204ENST00000539208 HSPD1P10809 573 aaKnown RBP21.27■■□□□ 1
GNE-204ENST00000539208 TAF7LQ5H9L4 462 aa21.27■■□□□ 1
GNE-204ENST00000539208 TTC39AQ5SRH9 613 aa21.27■■□□□ 1
GNE-204ENST00000539208 MAST3O60307 1309 aa21.27■□□□□ 0.99
GNE-204ENST00000539208 HS1BP3Q53T59 392 aa21.26■□□□□ 0.99
GNE-204ENST00000539208 GORABQ5T7V8 394 aa21.26■□□□□ 0.99
GNE-204ENST00000539208 DHX32Q7L7V1 743 aaKnown RBP21.26■□□□□ 0.99
GNE-204ENST00000539208 TTLL11Q8NHH1 800 aa21.26■□□□□ 0.99
GNE-204ENST00000539208 CDCA7Q9BWT1 371 aaPredicted RBP21.26■□□□□ 0.99
GNE-204ENST00000539208 RIPOR2Q9Y4F9 1068 aa21.26■□□□□ 0.99
GNE-204ENST00000539208 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
GNE-204ENST00000539208 STOX1Q6ZVD7 989 aa21.26■□□□□ 0.99
GNE-204ENST00000539208 FIBPO43427 364 aa21.25■□□□□ 0.99
GNE-204ENST00000539208 AGXT2Q9BYV1 514 aa21.25■□□□□ 0.99
GNE-204ENST00000539208 ADORA1P30542 326 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 CTSWP56202 376 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
GNE-204ENST00000539208 ZBTB1Q9Y2K1 713 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 RIC1Q4ADV7 1423 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 LAMA4Q16363 1823 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 SLFNL1Q499Z3 407 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 CDC37L1Q7L3B6 337 aa21.24■□□□□ 0.99
GNE-204ENST00000539208 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
GNE-204ENST00000539208 ITGA6P23229 1130 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 KRT85P78386 507 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 FKBP4Q02790 459 aaKnown RBP eCLIP21.23■□□□□ 0.99
GNE-204ENST00000539208 STK3Q13188 491 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 ZNF512BQ96KM6 892 aaPredicted RBP21.23■□□□□ 0.99
GNE-204ENST00000539208 ELP1O95163 1332 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 ANKRD18BA2A2Z9 1011 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 PFKFB2O60825 505 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 MYH3P11055 1940 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 GPTP24298 496 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 NUP98P52948 1817 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 SYNE4Q8N205 404 aa21.23■□□□□ 0.99
GNE-204ENST00000539208 M0R2C6 588 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 IRS4O14654 1257 aaPredicted RBP21.22■□□□□ 0.99
GNE-204ENST00000539208 DTNBO60941 627 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 ATP2B3Q16720 1220 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 LDHAL6AQ6ZMR3 332 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 FAM184AQ8NB25 1140 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 OSBP2Q969R2 916 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 CCDC85AQ96PX6 553 aaPredicted RBP21.22■□□□□ 0.99
GNE-204ENST00000539208 GREM2Q9H772 168 aa21.22■□□□□ 0.99
GNE-204ENST00000539208 E7EWF7 191 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 FBXL16Q8N461 479 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 BRF1Q92994 677 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 AK7Q96M32 723 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 THRAP3Q9Y2W1 955 aaKnown RBP21.21■□□□□ 0.99
GNE-204ENST00000539208 PDE8AO60658 829 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 METTL24Q5JXM2 366 aa21.21■□□□□ 0.99
GNE-204ENST00000539208 ZNF34Q8IZ26 560 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms