RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 EVCP57679 992 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 MEX3CQ5U5Q3 659 aaKnown RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 BOLA2Q9H3K6 86 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 PLCB1Q9NQ66 1216 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 INSRP06213 1382 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 PTGS1P23219 599 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 METTL24Q5JXM2 366 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 SYT10Q6XYQ8 523 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 SELENOSQ9BQE4 189 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 DNAJC25Q9H1X3 360 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 DACT1Q9NYF0 836 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 MPHOSPH10O00566 681 aaKnown RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 BUB1BO60566 1050 aaPredicted RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 ERCC6LQ2NKX8 1250 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 CAVIN4Q5BKX8 364 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 SAMD1Q6SPF0 538 aaPredicted RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 RPGRIP1Q96KN7 1286 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 ZSWIM4Q9H7M6 989 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 RUFY4Q6ZNE9 571 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 NAPGQ99747 312 aaPredicted RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 VCX3BQ9H321 246 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 ATP2C2O75185 946 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 ZBTB16Q05516 673 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 KCNH5Q8NCM2 988 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 IQCDQ96DY2 449 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 NUP160Q12769 1436 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 AKR1B15C9JRZ8 316 aaPredicted RBP7.85□□□□□ -1.15
SORT1-209ENST00000538502 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 ERMNQ8TAM6 284 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 KIAA1524Q8TCG1 905 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 TSKSQ9UJT2 592 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 HDAC9Q9UKV0 1011 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 KIF14Q15058 1648 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 TTC41PQ6P2S7 1318 aa7.85□□□□□ -1.15
SORT1-209ENST00000538502 ZNF500O60304 480 aaPredicted RBP7.84□□□□□ -1.15
SORT1-209ENST00000538502 GUCY1B3Q02153 619 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 TRAF1Q13077 416 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 TMEM67Q5HYA8 995 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 ZNF569Q5MCW4 686 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 BAG1Q99933 345 aaPredicted RBP7.84□□□□□ -1.15
SORT1-209ENST00000538502 MAP2K2P36507 400 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 FYB2Q5VWT5 728 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 PHLDB2Q86SQ0 1253 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 RAD54L2Q9Y4B4 1467 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 STAT6P42226 847 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 PPFIA1Q13136 1202 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
SORT1-209ENST00000538502 MTMR3Q13615 1198 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 BRD3Q15059 726 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 SDSP20132 328 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 IFT20Q8IY31 132 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 MKNK2Q9HBH9 465 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 PRC1O43663 620 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 PPFIA4O75335 1185 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 LUC7L3O95232 432 aaKnown RBP7.84□□□□□ -1.15
SORT1-209ENST00000538502 MYL6BP14649 208 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 VWA3BQ502W6 1294 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 CCDC174Q6PII3 467 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 TAOK1Q7L7X3 1001 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 CCDC42Q96M95 316 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 NKIRAS1Q9NYS0 192 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 MTUS1Q9ULD2 1270 aa7.84□□□□□ -1.15
SORT1-209ENST00000538502 GOLGA6CA6NDK9 693 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 ATP8B1O43520 1251 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 GOLGA6DP0CG33 693 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 SLC8A1P32418 973 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 DNA2P51530 1060 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CCT2P78371 535 aaKnown RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 NUTM2AQ8IVF1 878 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 GOLGA6AQ9NYA3 693 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 ELP1O95163 1332 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 RIOK3O14730 519 aaKnown RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 USP5P45974 858 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 RNF168Q8IYW5 571 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 ZNF444Q8N0Y2 327 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 SEC62Q99442 399 aaKnown RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.83□□□□□ -1.162e-6■■■■□ 24.6
SORT1-209ENST00000538502 DBF4Q9UBU7 674 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 SPTLC2O15270 562 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 IRX4P78413 519 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CYP26C1Q6V0L0 522 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 SOS1Q07889 1333 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 HMGB1P1B2RPK0 211 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 STARD3NLO95772 234 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CHMP4BP1P59074 171 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 MYL5Q02045 173 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 MAP7D1Q3KQU3 841 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 GPR161Q8N6U8 529 aaKnown RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 RAB3IPQ96QF0 476 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 NUP58Q9BVL2 599 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 RRAGDQ9NQL2 400 aaPredicted RBP7.83□□□□□ -1.16
SORT1-209ENST00000538502 RTL9Q8NET4 1388 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 NDUFAB1O14561 156 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CALM1P0DP23 149 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CALM2P0DP24 149 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 CALM3P0DP25 149 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 PCK1P35558 622 aa7.83□□□□□ -1.16
SORT1-209ENST00000538502 GNAQP50148 359 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms