RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PDCP20941 246 aa29.58■■■□□ 2.33
RAB40C-204ENST00000538492 CSPP1Q1MSJ5 1256 aa29.58■■■□□ 2.33
RAB40C-204ENST00000538492 CCDC57Q2TAC2 916 aa29.58■■■□□ 2.33
RAB40C-204ENST00000538492 FAM89AQ96GI7 184 aa29.58■■■□□ 2.33
RAB40C-204ENST00000538492 HSP90B1P14625 803 aaKnown RBP29.57■■■□□ 2.32
RAB40C-204ENST00000538492 CIAO1O76071 339 aa29.57■■■□□ 2.32
RAB40C-204ENST00000538492 MSNP26038 577 aaKnown RBP29.57■■■□□ 2.32
RAB40C-204ENST00000538492 STOX1Q6ZVD7 989 aa29.57■■■□□ 2.32
RAB40C-204ENST00000538492 KAT6BQ8WYB5 2073 aa29.56■■■□□ 2.32
RAB40C-204ENST00000538492 ATG3Q9NT62 314 aa29.56■■■□□ 2.32
RAB40C-204ENST00000538492 CEP126Q9P2H0 1117 aa29.56■■■□□ 2.32
RAB40C-204ENST00000538492 JAK2O60674 1132 aa29.56■■■□□ 2.32
RAB40C-204ENST00000538492 HELLSQ9NRZ9 838 aa29.56■■■□□ 2.32
RAB40C-204ENST00000538492 BTG4Q9NY30 223 aa29.56■■■□□ 2.32
RAB40C-204ENST00000538492 KIF6Q6ZMV9 814 aa29.55■■■□□ 2.32
RAB40C-204ENST00000538492 GTF3C6Q969F1 213 aa29.55■■■□□ 2.32
RAB40C-204ENST00000538492 FGD1P98174 961 aa29.54■■■□□ 2.32
RAB40C-204ENST00000538492 ZMYM1Q5SVZ6 1142 aa29.54■■■□□ 2.32
RAB40C-204ENST00000538492 BRF1Q92994 677 aa29.54■■■□□ 2.32
RAB40C-204ENST00000538492 A0A0G2JLW4 131 aa29.54■■■□□ 2.32
RAB40C-204ENST00000538492 FKBP4Q02790 459 aaKnown RBP eCLIP29.54■■■□□ 2.32
RAB40C-204ENST00000538492 HS1BP3Q53T59 392 aa29.54■■■□□ 2.32
RAB40C-204ENST00000538492 KRT85P78386 507 aa29.53■■■□□ 2.32
RAB40C-204ENST00000538492 TTC6Q86TZ1 520 aa29.53■■■□□ 2.32
RAB40C-204ENST00000538492 SYNE4Q8N205 404 aa29.53■■■□□ 2.32
RAB40C-204ENST00000538492 ADORA1P30542 326 aa29.52■■■□□ 2.32
RAB40C-204ENST00000538492 GIMAP6Q6P9H5 292 aa29.52■■■□□ 2.32
RAB40C-204ENST00000538492 LETM1O95202 739 aaPredicted RBP29.52■■■□□ 2.32
RAB40C-204ENST00000538492 GORABQ5T7V8 394 aa29.52■■■□□ 2.32
RAB40C-204ENST00000538492 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
RAB40C-204ENST00000538492 MAST3O60307 1309 aa29.51■■■□□ 2.31
RAB40C-204ENST00000538492 LAMA4Q16363 1823 aa29.51■■■□□ 2.31
RAB40C-204ENST00000538492 PDIA4P13667 645 aaKnown RBP29.51■■■□□ 2.31
RAB40C-204ENST00000538492 RNF113AO15541 343 aaKnown RBP29.51■■■□□ 2.31
RAB40C-204ENST00000538492 HSPD1P10809 573 aaKnown RBP29.51■■■□□ 2.31
RAB40C-204ENST00000538492 HCLS1P14317 486 aaPredicted RBP29.51■■■□□ 2.31
RAB40C-204ENST00000538492 TAF7LQ5H9L4 462 aa29.51■■■□□ 2.31
RAB40C-204ENST00000538492 DSCC1Q9BVC3 393 aa29.51■■■□□ 2.31
RAB40C-204ENST00000538492 STARD3NLO95772 234 aa29.5■■■□□ 2.31
RAB40C-204ENST00000538492 GPTP24298 496 aa29.5■■■□□ 2.31
RAB40C-204ENST00000538492 DDX11Q96FC9 970 aa29.5■■■□□ 2.31
RAB40C-204ENST00000538492 NOL7Q9UMY1 257 aaKnown RBP29.5■■■□□ 2.31
RAB40C-204ENST00000538492 TEX13AQ9BXU3 409 aaPredicted RBP29.5■■■□□ 2.31
RAB40C-204ENST00000538492 TFIP11Q9UBB9 837 aaKnown RBP29.5■■■□□ 2.31
RAB40C-204ENST00000538492 PCCAP05165 728 aaPredicted RBP29.49■■■□□ 2.31
RAB40C-204ENST00000538492 XAGE2Q96GT9 111 aa29.49■■■□□ 2.31
RAB40C-204ENST00000538492 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.49■■■□□ 2.31
RAB40C-204ENST00000538492 TRIM28Q13263 835 aaKnown RBP29.49■■■□□ 2.31
RAB40C-204ENST00000538492 HLFQ16534 295 aa29.49■■■□□ 2.31
RAB40C-204ENST00000538492 CCDC158Q5M9N0 1113 aa29.49■■■□□ 2.31
RAB40C-204ENST00000538492 TTC39AQ5SRH9 613 aa29.49■■■□□ 2.31
RAB40C-204ENST00000538492 M0R2C6 588 aa29.48■■■□□ 2.31
RAB40C-204ENST00000538492 SCRN1Q12765 414 aa29.48■■■□□ 2.31
RAB40C-204ENST00000538492 VSIG10Q8N0Z9 540 aa29.48■■■□□ 2.31
RAB40C-204ENST00000538492 ZBTB38Q8NAP3 1195 aaPredicted RBP29.48■■■□□ 2.31
RAB40C-204ENST00000538492 FAM184AQ8NB25 1140 aa29.48■■■□□ 2.31
RAB40C-204ENST00000538492 DHX32Q7L7V1 743 aaKnown RBP29.48■■■□□ 2.31
RAB40C-204ENST00000538492 IFIT5Q13325 482 aaKnown RBP29.47■■■□□ 2.31
RAB40C-204ENST00000538492 ITGB4P16144 1822 aa29.47■■■□□ 2.31
RAB40C-204ENST00000538492 HMGB1P09429 215 aaKnown RBP29.46■■■□□ 2.31
RAB40C-204ENST00000538492 OSBP2Q969R2 916 aa29.46■■■□□ 2.31
RAB40C-204ENST00000538492 AKAP2Q9Y2D5 859 aa29.46■■■□□ 2.31
RAB40C-204ENST00000538492 MAP3K15Q6ZN16 1313 aa29.46■■■□□ 2.31
RAB40C-204ENST00000538492 APOBRQ0VD83 1088 aa29.46■■■□□ 2.31
RAB40C-204ENST00000538492 NHSL1Q5SYE7 1610 aa29.46■■■□□ 2.31
RAB40C-204ENST00000538492 E7EWF7 191 aa29.45■■■□□ 2.31
RAB40C-204ENST00000538492 SCARF1Q14162 830 aa29.45■■■□□ 2.31
RAB40C-204ENST00000538492 TTLL5Q6EMB2 1281 aa29.45■■■□□ 2.31
RAB40C-204ENST00000538492 CHST3Q7LGC8 479 aa29.45■■■□□ 2.31
RAB40C-204ENST00000538492 USP25Q9UHP3 1055 aa29.45■■■□□ 2.31
RAB40C-204ENST00000538492 GIGYF2Q6Y7W6 1299 aaKnown RBP29.45■■■□□ 2.3
RAB40C-204ENST00000538492 SYTL4Q96C24 671 aaPredicted RBP29.45■■■□□ 2.3
RAB40C-204ENST00000538492 CCDC39Q9UFE4 941 aa29.45■■■□□ 2.3
RAB40C-204ENST00000538492 CSF1RP07333 972 aa29.44■■■□□ 2.3
RAB40C-204ENST00000538492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.44■■■□□ 2.3
RAB40C-204ENST00000538492 SPATA32Q96LK8 384 aa29.44■■■□□ 2.3
RAB40C-204ENST00000538492 SLC4A9Q96Q91 983 aa29.44■■■□□ 2.3
RAB40C-204ENST00000538492 WASHC4Q2M389 1173 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 PI16Q6UXB8 463 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 PLA2G12BQ9BX93 195 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 ELP1O95163 1332 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 H3BQV1 296 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 LIG1P18858 919 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 IFFO2Q5TF58 517 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 FUCA2Q9BTY2 467 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 NAP1L2Q9ULW6 460 aaPredicted RBP29.43■■■□□ 2.3
RAB40C-204ENST00000538492 ZKSCAN5Q9Y2L8 839 aa29.43■■■□□ 2.3
RAB40C-204ENST00000538492 SPEF2Q9C093 1822 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 PTMAP06454 111 aaKnown RBP29.42■■■□□ 2.3
RAB40C-204ENST00000538492 EXOSC10Q01780 885 aaKnown RBP29.42■■■□□ 2.3
RAB40C-204ENST00000538492 HSP90AB3PQ58FF7 597 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 SCAND2PQ9GZW5 306 aaPredicted RBP29.42■■■□□ 2.3
RAB40C-204ENST00000538492 KDM4FA0A1W2PPD8 638 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 PFKFB2O60825 505 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 FOSBP53539 338 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 CCT2P78371 535 aaKnown RBP29.42■■■□□ 2.3
RAB40C-204ENST00000538492 UVSSAQ2YD98 709 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 NLRP10Q86W26 655 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 FBXO3Q9UK99 471 aa29.42■■■□□ 2.3
RAB40C-204ENST00000538492 ZAP70P43403 619 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 1602.3 ms