RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 MINPP1Q9UNW1 487 aa21.85■■□□□ 1.09
GPN3-202ENST00000537466 KIF16BQ96L93 1317 aa21.85■■□□□ 1.09
GPN3-202ENST00000537466 SCN9AQ15858 1988 aa21.85■■□□□ 1.09
GPN3-202ENST00000537466 ANKRD18BA2A2Z9 1011 aa21.84■■□□□ 1.09
GPN3-202ENST00000537466 UFL1O94874 794 aa21.84■■□□□ 1.09
GPN3-202ENST00000537466 IGHMBP2P38935 993 aaKnown RBP21.84■■□□□ 1.09
GPN3-202ENST00000537466 GPC2Q8N158 579 aa21.84■■□□□ 1.09
GPN3-202ENST00000537466 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
GPN3-202ENST00000537466 USP44Q9H0E7 712 aa21.84■■□□□ 1.09
GPN3-202ENST00000537466 ZNRF3Q9ULT6 936 aa21.84■■□□□ 1.09
GPN3-202ENST00000537466 WTIPA6NIX2 430 aaPredicted RBP21.83■■□□□ 1.09
GPN3-202ENST00000537466 GGA1Q9UJY5 639 aa21.83■■□□□ 1.09
GPN3-202ENST00000537466 GJA3Q9Y6H8 435 aa21.83■■□□□ 1.09
GPN3-202ENST00000537466 XDHP47989 1333 aa21.83■■□□□ 1.09
GPN3-202ENST00000537466 YDJCA8MPS7 323 aa21.83■■□□□ 1.08
GPN3-202ENST00000537466 IFIT5Q13325 482 aaKnown RBP21.83■■□□□ 1.08
GPN3-202ENST00000537466 EYA3Q99504 573 aa21.83■■□□□ 1.08
GPN3-202ENST00000537466 PSME4Q14997 1843 aa21.83■■□□□ 1.08
GPN3-202ENST00000537466 CCT4P50991 539 aaKnown RBP21.82■■□□□ 1.08
GPN3-202ENST00000537466 CXCL9Q07325 125 aa21.82■■□□□ 1.08
GPN3-202ENST00000537466 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
GPN3-202ENST00000537466 ARHGAP45Q92619 1136 aa21.82■■□□□ 1.08
GPN3-202ENST00000537466 MPHOSPH8Q99549 860 aa21.82■■□□□ 1.08
GPN3-202ENST00000537466 BICC1Q9H694 974 aaKnown RBP21.82■■□□□ 1.08
GPN3-202ENST00000537466 DBNDD1Q9H9R9 158 aa21.82■■□□□ 1.08
GPN3-202ENST00000537466 TNNQ9UQP3 1299 aa21.82■■□□□ 1.08
GPN3-202ENST00000537466 ZNF594Q96JF6 807 aaPredicted RBP21.81■■□□□ 1.08
GPN3-202ENST00000537466 ATP2B4P23634 1241 aa21.8■■□□□ 1.08
GPN3-202ENST00000537466 DOK7Q18PE1 504 aa21.8■■□□□ 1.08
GPN3-202ENST00000537466 CCDC57Q2TAC2 916 aa21.8■■□□□ 1.08
GPN3-202ENST00000537466 ANKRD44Q8N8A2 993 aa21.8■■□□□ 1.08
GPN3-202ENST00000537466 FRAT1Q92837 279 aaPredicted RBP21.8■■□□□ 1.08
GPN3-202ENST00000537466 ADAMTSL1Q8N6G6 1762 aa21.79■■□□□ 1.08
GPN3-202ENST00000537466 IQCA1LA6NCM1 817 aa21.79■■□□□ 1.08
GPN3-202ENST00000537466 RAD17O75943 681 aa21.79■■□□□ 1.08
GPN3-202ENST00000537466 TRIM27P14373 513 aa21.79■■□□□ 1.08
GPN3-202ENST00000537466 RABL6Q3YEC7 729 aaPredicted RBP21.79■■□□□ 1.08
GPN3-202ENST00000537466 ZC3H12CQ9C0D7 883 aaKnown RBP21.79■■□□□ 1.08
GPN3-202ENST00000537466 ECE2O60344 883 aa21.78■■□□□ 1.08
GPN3-202ENST00000537466 POTEIP0CG38 1075 aa21.78■■□□□ 1.08
GPN3-202ENST00000537466 POTEJP0CG39 1038 aa21.78■■□□□ 1.08
GPN3-202ENST00000537466 SCNN1DP51172 638 aa21.78■■□□□ 1.08
GPN3-202ENST00000537466 TAF1DQ9H5J8 278 aaPredicted RBP21.78■■□□□ 1.08
GPN3-202ENST00000537466 HACL1Q9UJ83 578 aa21.78■■□□□ 1.08
GPN3-202ENST00000537466 ZNF646O15015 1829 aaPredicted RBP21.78■■□□□ 1.08
GPN3-202ENST00000537466 CHRNDQ07001 517 aa21.77■■□□□ 1.08
GPN3-202ENST00000537466 CIAPIN1Q6FI81 312 aa21.77■■□□□ 1.08
GPN3-202ENST00000537466 ATF7IPQ6VMQ6 1270 aa21.77■■□□□ 1.08
GPN3-202ENST00000537466 IPO8O15397 1037 aaKnown RBP21.77■■□□□ 1.07
GPN3-202ENST00000537466 TAF7LQ5H9L4 462 aa21.77■■□□□ 1.07
GPN3-202ENST00000537466 INTS3Q68E01 1043 aaKnown RBP21.77■■□□□ 1.07
GPN3-202ENST00000537466 KCNQ5Q9NR82 932 aa21.77■■□□□ 1.07
GPN3-202ENST00000537466 EPHX2P34913 555 aa21.76■■□□□ 1.07
GPN3-202ENST00000537466 ANKRD2Q9GZV1 360 aa21.76■■□□□ 1.07
GPN3-202ENST00000537466 MED23Q9ULK4 1368 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 TAF5LO75529 589 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 EPS15P42566 896 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 FSTL1Q12841 308 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 LDHAL6AQ6ZMR3 332 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 SMC1BQ8NDV3 1235 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 HELBQ8NG08 1087 aaPredicted RBP21.75■■□□□ 1.07
GPN3-202ENST00000537466 CLUAP1Q96AJ1 413 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 LEMD3Q9Y2U8 911 aa21.75■■□□□ 1.07
GPN3-202ENST00000537466 SNAP23O00161 211 aa21.74■■□□□ 1.07
GPN3-202ENST00000537466 PSMD14O00487 310 aa21.74■■□□□ 1.07
GPN3-202ENST00000537466 UBTFL1P0CB47 393 aaPredicted RBP21.74■■□□□ 1.07
GPN3-202ENST00000537466 KLRK1P26718 216 aa21.74■■□□□ 1.07
GPN3-202ENST00000537466 GMPSP49915 693 aaPredicted RBP21.74■■□□□ 1.07
GPN3-202ENST00000537466 TNIP1Q15025 636 aa21.74■■□□□ 1.07
GPN3-202ENST00000537466 TXNRD3Q86VQ6 643 aa21.74■■□□□ 1.07
GPN3-202ENST00000537466 MEIS3Q99687 375 aa21.74■■□□□ 1.07
GPN3-202ENST00000537466 PUS3Q9BZE2 481 aaKnown RBP21.74■■□□□ 1.07
GPN3-202ENST00000537466 ZNF804BA4D1E1 1349 aa21.73■■□□□ 1.07
GPN3-202ENST00000537466 G3V3G9 751 aa21.73■■□□□ 1.07
GPN3-202ENST00000537466 HSPA6P17066 643 aa21.73■■□□□ 1.07
GPN3-202ENST00000537466 LMOD1P29536 600 aaPredicted RBP21.73■■□□□ 1.07
GPN3-202ENST00000537466 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
GPN3-202ENST00000537466 DCAF8Q5TAQ9 597 aa21.73■■□□□ 1.07
GPN3-202ENST00000537466 ZKSCAN2Q63HK3 967 aa21.73■■□□□ 1.07
GPN3-202ENST00000537466 CNNM1Q9NRU3 951 aa21.73■■□□□ 1.07
GPN3-202ENST00000537466 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
GPN3-202ENST00000537466 ZBTB12Q9Y330 459 aaPredicted RBP21.72■■□□□ 1.07
GPN3-202ENST00000537466 KLHDC4Q8TBB5 520 aa21.71■■□□□ 1.07
GPN3-202ENST00000537466 LRRFIP2Q9Y608 721 aaKnown RBP21.71■■□□□ 1.07
GPN3-202ENST00000537466 CHADLQ6NUI6 762 aa21.71■■□□□ 1.07
GPN3-202ENST00000537466 IRS2Q9Y4H2 1338 aa21.7■■□□□ 1.06
GPN3-202ENST00000537466 SHTN1A0MZ66 631 aa21.7■■□□□ 1.06
GPN3-202ENST00000537466 PLIN1O60240 522 aa21.7■■□□□ 1.06
GPN3-202ENST00000537466 KCNJ4P48050 445 aa21.7■■□□□ 1.06
GPN3-202ENST00000537466 PNMA8AQ86V59 439 aaPredicted RBP21.7■■□□□ 1.06
GPN3-202ENST00000537466 LDHDQ86WU2 507 aa21.7■■□□□ 1.06
GPN3-202ENST00000537466 TMEM57Q8N5G2 664 aa21.7■■□□□ 1.06
GPN3-202ENST00000537466 RFX5P48382 616 aaPredicted RBP21.69■■□□□ 1.06
GPN3-202ENST00000537466 LRRC24Q50LG9 513 aa21.69■■□□□ 1.06
GPN3-202ENST00000537466 RIPOR2Q9Y4F9 1068 aa21.69■■□□□ 1.06
GPN3-202ENST00000537466 PODNQ7Z5L7 613 aa21.68■■□□□ 1.06
GPN3-202ENST00000537466 CLEC11AQ9Y240 323 aa21.68■■□□□ 1.06
GPN3-202ENST00000537466 VIL1P09327 827 aaKnown RBP21.67■■□□□ 1.06
GPN3-202ENST00000537466 COA1Q9GZY4 146 aa21.67■■□□□ 1.06
GPN3-202ENST00000537466 ADARB2Q9NS39 739 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms