RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CYP4F22Q6NT55 531 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CDC37L1Q7L3B6 337 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 PODXL2Q9NZ53 605 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 MAP3K2Q9Y2U5 619 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 SCN9AQ15858 1988 aa25.34■■□□□ 1.65
TNFRSF1B-204ENST00000536782 DOK7Q18PE1 504 aa25.33■■□□□ 1.65
TNFRSF1B-204ENST00000536782 CCDC27Q2M243 656 aa25.33■■□□□ 1.65
TNFRSF1B-204ENST00000536782 JARID2Q92833 1246 aaPredicted RBP25.33■■□□□ 1.65
TNFRSF1B-204ENST00000536782 TSR2Q969E8 191 aaKnown RBP25.33■■□□□ 1.65
TNFRSF1B-204ENST00000536782 ZC3H12CQ9C0D7 883 aaKnown RBP25.33■■□□□ 1.65
TNFRSF1B-204ENST00000536782 ANKIB1Q9P2G1 1089 aa25.33■■□□□ 1.65
TNFRSF1B-204ENST00000536782 RPS12P25398 132 aaKnown RBP25.32■■□□□ 1.64
TNFRSF1B-204ENST00000536782 KSR2Q6VAB6 950 aa25.32■■□□□ 1.64
TNFRSF1B-204ENST00000536782 GPR101Q96P66 508 aaPredicted RBP25.32■■□□□ 1.64
TNFRSF1B-204ENST00000536782 STK31Q9BXU1 1019 aa25.32■■□□□ 1.64
TNFRSF1B-204ENST00000536782 SAPCD2Q86UD0 394 aa25.31■■□□□ 1.64
TNFRSF1B-204ENST00000536782 KCNQ5Q9NR82 932 aa25.31■■□□□ 1.64
TNFRSF1B-204ENST00000536782 PI4KAP2A4QPH2 592 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 UFL1O94874 794 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 SAMD7Q7Z3H4 446 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 WWC1Q8IX03 1113 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 PI4KAP1Q8N8J0 262 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 CCDC85AQ96PX6 553 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 ZNF408Q9H9D4 720 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 GGA1Q9UJY5 639 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 RTL9Q8NET4 1388 aa25.3■■□□□ 1.64
TNFRSF1B-204ENST00000536782 G3V3G9 751 aa25.29■■□□□ 1.64
TNFRSF1B-204ENST00000536782 DCAF8Q5TAQ9 597 aa25.29■■□□□ 1.64
TNFRSF1B-204ENST00000536782 ANKRD18AQ8IVF6 992 aa25.29■■□□□ 1.64
TNFRSF1B-204ENST00000536782 BEGAINQ9BUH8 593 aa25.29■■□□□ 1.64
TNFRSF1B-204ENST00000536782 NEXNQ0ZGT2 675 aa25.28■■□□□ 1.64
TNFRSF1B-204ENST00000536782 TBC1D10BQ4KMP7 808 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF1B-204ENST00000536782 USP48Q86UV5 1035 aa25.28■■□□□ 1.64
TNFRSF1B-204ENST00000536782 HHIPL1Q96JK4 782 aa25.28■■□□□ 1.64
TNFRSF1B-204ENST00000536782 IGKV5-2P06315 115 aa25.27■■□□□ 1.64
TNFRSF1B-204ENST00000536782 MAP2K2P36507 400 aa25.27■■□□□ 1.64
TNFRSF1B-204ENST00000536782 TWISTNBQ3B726 338 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF1B-204ENST00000536782 VIL1P09327 827 aaKnown RBP25.26■■□□□ 1.63
TNFRSF1B-204ENST00000536782 RBM26Q5T8P6 1007 aaKnown RBP25.26■■□□□ 1.63
TNFRSF1B-204ENST00000536782 PSME4Q14997 1843 aa25.26■■□□□ 1.63
TNFRSF1B-204ENST00000536782 CASP8AP2Q9UKL3 1982 aa25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 AOC2O75106 756 aa25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 EGFRP00533 1210 aa25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 CTSWP56202 376 aa25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 CDC5LQ99459 802 aaKnown RBP25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 XDHP47989 1333 aa25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 IL16Q14005 1332 aa25.25■■□□□ 1.63
TNFRSF1B-204ENST00000536782 SLC4A2P04920 1241 aa25.24■■□□□ 1.63
TNFRSF1B-204ENST00000536782 NCBP3Q53F19 620 aaKnown RBP25.24■■□□□ 1.63
TNFRSF1B-204ENST00000536782 DLK2Q6UY11 383 aa25.24■■□□□ 1.63
TNFRSF1B-204ENST00000536782 KRT26Q7Z3Y9 468 aa25.24■■□□□ 1.63
TNFRSF1B-204ENST00000536782 DCPSQ96C86 337 aaKnown RBP25.24■■□□□ 1.63
TNFRSF1B-204ENST00000536782 CWF19L2Q2TBE0 894 aaKnown RBP25.23■■□□□ 1.63
TNFRSF1B-204ENST00000536782 TTLL11Q8NHH1 800 aa25.23■■□□□ 1.63
TNFRSF1B-204ENST00000536782 NEURL1BA8MQ27 555 aa25.22■■□□□ 1.63
TNFRSF1B-204ENST00000536782 ATP2B4P23634 1241 aa25.22■■□□□ 1.63
TNFRSF1B-204ENST00000536782 KIF4BQ2VIQ3 1234 aa25.22■■□□□ 1.63
TNFRSF1B-204ENST00000536782 G2E3Q7L622 706 aa25.22■■□□□ 1.63
TNFRSF1B-204ENST00000536782 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
TNFRSF1B-204ENST00000536782 MYH3P11055 1940 aa25.21■■□□□ 1.63
TNFRSF1B-204ENST00000536782 RSBN1LQ6PCB5 846 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF1B-204ENST00000536782 AGBL3Q8NEM8 1001 aa25.2■■□□□ 1.62
TNFRSF1B-204ENST00000536782 GREM2Q9H772 168 aa25.2■■□□□ 1.62
TNFRSF1B-204ENST00000536782 BSDC1Q9NW68 430 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF1B-204ENST00000536782 H7C1W4 665 aa25.19■■□□□ 1.62
TNFRSF1B-204ENST00000536782 HUNKP57058 714 aa25.19■■□□□ 1.62
TNFRSF1B-204ENST00000536782 PODNQ7Z5L7 613 aa25.19■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ADM5C9JUS6 153 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 FLIIQ13045 1269 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 UBE3BQ7Z3V4 1068 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ABHD8Q96I13 439 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 TSKSQ9UJT2 592 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 MINPP1Q9UNW1 487 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ZNF609O15014 1411 aa25.18■■□□□ 1.62
TNFRSF1B-204ENST00000536782 FANCIQ9NVI1 1328 aa25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ANP32CO43423 234 aa25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 CA12O43570 354 aa25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 BRPF1P55201 1214 aaPredicted RBP25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ZNF280AP59817 542 aaPredicted RBP25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 SULF1Q8IWU6 871 aa25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 C2orf69Q8N8R5 385 aa25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 GBA2Q9HCG7 927 aaPredicted RBP25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 GGA3Q9NZ52 723 aa25.17■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ZNF646O15015 1829 aaPredicted RBP25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 USP17L3A6NCW0 530 aa25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 USP17L4A6NCW7 530 aa25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 NOGQ13253 232 aa25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 FKBP5Q13451 457 aaPredicted RBP25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 GCKRQ14397 625 aa25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 USP17L1Q7RTZ2 530 aa25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ZIC5Q96T25 663 aa25.16■■□□□ 1.62
TNFRSF1B-204ENST00000536782 WDR63Q8IWG1 891 aa25.15■■□□□ 1.62
TNFRSF1B-204ENST00000536782 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
TNFRSF1B-204ENST00000536782 MED23Q9ULK4 1368 aa25.15■■□□□ 1.62
TNFRSF1B-204ENST00000536782 WTIPA6NIX2 430 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 USP17L8P0C7I0 530 aa25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 IGHMBP2P38935 993 aaKnown RBP25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 CCT4P50991 539 aaKnown RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms