RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 FKBP1BP68106 108 aa25.57■■□□□ 1.68
LRP6-202ENST00000535731 RASAL3Q86YV0 1011 aa25.57■■□□□ 1.68
LRP6-202ENST00000535731 ZC3H12CQ9C0D7 883 aaKnown RBP25.57■■□□□ 1.68
LRP6-202ENST00000535731 TBC1D16Q8TBP0 767 aa25.56■■□□□ 1.68
LRP6-202ENST00000535731 AKAP11Q9UKA4 1901 aa25.56■■□□□ 1.68
LRP6-202ENST00000535731 FAM89AQ96GI7 184 aa25.55■■□□□ 1.68
LRP6-202ENST00000535731 HDAC9Q9UKV0 1011 aa25.55■■□□□ 1.68
LRP6-202ENST00000535731 SCARF1Q14162 830 aa25.54■■□□□ 1.68
LRP6-202ENST00000535731 ZNF428Q96B54 188 aa25.54■■□□□ 1.68
LRP6-202ENST00000535731 ASTN2O75129 1339 aaPredicted RBP25.54■■□□□ 1.68
LRP6-202ENST00000535731 TAF1P21675 1872 aa25.53■■□□□ 1.68
LRP6-202ENST00000535731 G3V3G9 751 aa25.53■■□□□ 1.68
LRP6-202ENST00000535731 RIPK4P57078 832 aa25.53■■□□□ 1.68
LRP6-202ENST00000535731 ZNF280AP59817 542 aaPredicted RBP25.53■■□□□ 1.68
LRP6-202ENST00000535731 RPS8P62241 208 aaKnown RBP25.53■■□□□ 1.68
LRP6-202ENST00000535731 DCAF8Q5TAQ9 597 aa25.53■■□□□ 1.68
LRP6-202ENST00000535731 LRRC37AA6NMS7 1700 aa25.53■■□□□ 1.68
LRP6-202ENST00000535731 ANGEL2Q5VTE6 544 aaKnown RBP25.52■■□□□ 1.68
LRP6-202ENST00000535731 ANKRD13DQ6ZTN6 518 aa25.52■■□□□ 1.68
LRP6-202ENST00000535731 AGBL3Q8NEM8 1001 aa25.52■■□□□ 1.68
LRP6-202ENST00000535731 PLBD2Q8NHP8 589 aa25.52■■□□□ 1.68
LRP6-202ENST00000535731 ISCA1Q9BUE6 129 aa25.52■■□□□ 1.68
LRP6-202ENST00000535731 PODXL2Q9NZ53 605 aa25.52■■□□□ 1.68
LRP6-202ENST00000535731 ZNF296Q8WUU4 475 aaPredicted RBP25.51■■□□□ 1.67
LRP6-202ENST00000535731 TBC1D8O95759 1140 aa25.49■■□□□ 1.67
LRP6-202ENST00000535731 RSBN1LQ6PCB5 846 aaPredicted RBP25.49■■□□□ 1.67
LRP6-202ENST00000535731 ATP5J2-PTCD1G3V325 749 aa25.48■■□□□ 1.67
LRP6-202ENST00000535731 PITPNM2Q9BZ72 1349 aa25.47■■□□□ 1.67
LRP6-202ENST00000535731 IRS4O14654 1257 aaPredicted RBP25.47■■□□□ 1.67
LRP6-202ENST00000535731 TM4SF4P48230 202 aa25.47■■□□□ 1.67
LRP6-202ENST00000535731 LMOD3Q0VAK6 560 aa25.47■■□□□ 1.67
LRP6-202ENST00000535731 NOM1Q5C9Z4 860 aaKnown RBP25.47■■□□□ 1.67
LRP6-202ENST00000535731 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
LRP6-202ENST00000535731 CHPF2Q9P2E5 772 aa25.47■■□□□ 1.67
LRP6-202ENST00000535731 ANKIB1Q9P2G1 1089 aa25.47■■□□□ 1.67
LRP6-202ENST00000535731 TRIM28Q13263 835 aaKnown RBP25.46■■□□□ 1.67
LRP6-202ENST00000535731 RTL5Q5HYW3 569 aaPredicted RBP25.46■■□□□ 1.67
LRP6-202ENST00000535731 GGA1Q9UJY5 639 aa25.46■■□□□ 1.67
LRP6-202ENST00000535731 UBE2Q2LH0YL09 131 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 GPR25O00155 361 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 UFL1O94874 794 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 USP17L8P0C7I0 530 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 FBXO46Q6PJ61 603 aaPredicted RBP25.45■■□□□ 1.66
LRP6-202ENST00000535731 MOB2Q70IA6 237 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 GMLQ99445 158 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 MYOZ2Q9NPC6 264 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 ZNF609O15014 1411 aa25.45■■□□□ 1.66
LRP6-202ENST00000535731 CHL1O00533 1208 aa25.43■■□□□ 1.66
LRP6-202ENST00000535731 TMPOP42166 694 aaKnown RBP25.43■■□□□ 1.66
LRP6-202ENST00000535731 KRT24Q2M2I5 525 aa25.43■■□□□ 1.66
LRP6-202ENST00000535731 DBF4Q9UBU7 674 aaPredicted RBP25.43■■□□□ 1.66
LRP6-202ENST00000535731 DDX60Q8IY21 1712 aaKnown RBP25.43■■□□□ 1.66
LRP6-202ENST00000535731 HSP90B1P14625 803 aaKnown RBP25.42■■□□□ 1.66
LRP6-202ENST00000535731 HDGFL1Q5TGJ6 251 aa25.42■■□□□ 1.66
LRP6-202ENST00000535731 SEC31BQ9NQW1 1179 aa25.42■■□□□ 1.66
LRP6-202ENST00000535731 PAPPA2Q9BXP8 1791 aa25.41■■□□□ 1.66
LRP6-202ENST00000535731 SCN9AQ15858 1988 aa25.4■■□□□ 1.66
LRP6-202ENST00000535731 USP17L3A6NCW0 530 aa25.4■■□□□ 1.66
LRP6-202ENST00000535731 USP17L4A6NCW7 530 aa25.4■■□□□ 1.66
LRP6-202ENST00000535731 TTLL12Q14166 644 aaPredicted RBP25.4■■□□□ 1.66
LRP6-202ENST00000535731 USP17L1Q7RTZ2 530 aa25.4■■□□□ 1.66
LRP6-202ENST00000535731 PODNQ7Z5L7 613 aa25.4■■□□□ 1.66
LRP6-202ENST00000535731 ZBTB38Q8NAP3 1195 aaPredicted RBP25.4■■□□□ 1.66
LRP6-202ENST00000535731 HYPKQ9NX55 129 aa25.4■■□□□ 1.66
LRP6-202ENST00000535731 COL4A1P02462 1669 aa25.39■■□□□ 1.66
LRP6-202ENST00000535731 FKTNO75072 461 aa25.39■■□□□ 1.66
LRP6-202ENST00000535731 HOXB7P09629 217 aa25.39■■□□□ 1.66
LRP6-202ENST00000535731 PRAMEF18Q5VWM3 479 aa25.39■■□□□ 1.66
LRP6-202ENST00000535731 CFHR5Q9BXR6 569 aa25.39■■□□□ 1.66
LRP6-202ENST00000535731 SCAF8Q9UPN6 1271 aaKnown RBP25.39■■□□□ 1.66
LRP6-202ENST00000535731 SREBF2Q12772 1141 aa25.38■■□□□ 1.65
LRP6-202ENST00000535731 NF2P35240 595 aa25.37■■□□□ 1.65
LRP6-202ENST00000535731 NBPF9Q3BBW0 867 aa25.37■■□□□ 1.65
LRP6-202ENST00000535731 CCDC152Q4G0S7 254 aa25.37■■□□□ 1.65
LRP6-202ENST00000535731 LAS1LQ9Y4W2 734 aaKnown RBP25.37■■□□□ 1.65
LRP6-202ENST00000535731 ATP2B4P23634 1241 aa25.36■■□□□ 1.65
LRP6-202ENST00000535731 XDHP47989 1333 aa25.36■■□□□ 1.65
LRP6-202ENST00000535731 MKRN3Q13064 507 aaKnown RBP25.34■■□□□ 1.65
LRP6-202ENST00000535731 NEUROD2Q15784 382 aa25.34■■□□□ 1.65
LRP6-202ENST00000535731 HABP4Q5JVS0 413 aaKnown RBP25.34■■□□□ 1.65
LRP6-202ENST00000535731 RIC3Q7Z5B4 369 aa25.34■■□□□ 1.65
LRP6-202ENST00000535731 OGFOD1Q8N543 542 aa25.34■■□□□ 1.65
LRP6-202ENST00000535731 PDE8AO60658 829 aa25.33■■□□□ 1.65
LRP6-202ENST00000535731 ARMC9Q7Z3E5 817 aa25.33■■□□□ 1.65
LRP6-202ENST00000535731 ANKRD18AQ8IVF6 992 aa25.33■■□□□ 1.65
LRP6-202ENST00000535731 R3HDMLQ9H3Y0 253 aa25.33■■□□□ 1.65
LRP6-202ENST00000535731 WNT10BO00744 389 aa25.32■■□□□ 1.64
LRP6-202ENST00000535731 ALDH1A1P00352 501 aa25.32■■□□□ 1.64
LRP6-202ENST00000535731 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
LRP6-202ENST00000535731 PTPN12Q05209 780 aaKnown RBP25.32■■□□□ 1.64
LRP6-202ENST00000535731 PCCAP05165 728 aaPredicted RBP25.31■■□□□ 1.64
LRP6-202ENST00000535731 MMP14P50281 582 aa25.31■■□□□ 1.64
LRP6-202ENST00000535731 INTS3Q68E01 1043 aaKnown RBP25.31■■□□□ 1.64
LRP6-202ENST00000535731 CCDC191Q8NCU4 936 aa25.31■■□□□ 1.64
LRP6-202ENST00000535731 GOLGA2Q08379 1002 aa25.3■■□□□ 1.64
LRP6-202ENST00000535731 DUSP27Q5VZP5 1158 aa25.3■■□□□ 1.64
LRP6-202ENST00000535731 INHBEP58166 350 aa25.29■■□□□ 1.64
LRP6-202ENST00000535731 DACT2Q5SW24 774 aa25.29■■□□□ 1.64
LRP6-202ENST00000535731 LDLRAD1Q5T700 205 aa25.29■■□□□ 1.64
LRP6-202ENST00000535731 SPRYD7Q5W111 196 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms