RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KCNA3P22001 575 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 CHRNA5P30532 468 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 CNKSR1Q969H4 720 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 CNNM1Q9NRU3 951 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 COL4A1P02462 1669 aa15.15■□□□□ 0.02
SCARB1-204ENST00000535005 SASH1O94885 1247 aa15.14■□□□□ 0.01
SCARB1-204ENST00000535005 DPEP1P16444 411 aa15.14■□□□□ 0.01
SCARB1-204ENST00000535005 GSE1Q14687 1217 aa15.14■□□□□ 0.01
SCARB1-204ENST00000535005 KIF1BPQ96EK5 621 aa15.14■□□□□ 0.01
SCARB1-204ENST00000535005 MROH5Q6ZUA9 1318 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 NUCB1Q02818 461 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 OS9Q13438 667 aaPredicted RBP15.13■□□□□ 0.01
SCARB1-204ENST00000535005 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.011e-7■□□□□ 9.5
SCARB1-204ENST00000535005 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 KIAA1551Q9HCM1 1747 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 A0A0G2JLW4 131 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 RHPN1Q8TCX5 695 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 MINPP1Q9UNW1 487 aa15.13■□□□□ 0.01
SCARB1-204ENST00000535005 DLEC1Q9Y238 1755 aa15.12■□□□□ 0.01
SCARB1-204ENST00000535005 GPR108Q9NPR9 543 aa15.12■□□□□ 0.01
SCARB1-204ENST00000535005 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
SCARB1-204ENST00000535005 TAF1P21675 1872 aa15.12■□□□□ 0.01
SCARB1-204ENST00000535005 PPEF1O14829 653 aaPredicted RBP15.11■□□□□ 0.01
SCARB1-204ENST00000535005 ANKRD45Q5TZF3 282 aa15.11■□□□□ 0.01
SCARB1-204ENST00000535005 SP8Q8IXZ3 490 aa15.11■□□□□ 0.01
SCARB1-204ENST00000535005 VGLL2Q8N8G2 317 aa15.11■□□□□ 0.01
SCARB1-204ENST00000535005 ATP6V0A2Q9Y487 856 aa15.11■□□□□ 0.01
SCARB1-204ENST00000535005 CHRNDQ07001 517 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 TFCP2Q12800 502 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 METTL24Q5JXM2 366 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 TTLL6Q8N841 843 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 PIM2Q9P1W9 311 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 PDE8BO95263 885 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 PRPF40BQ6NWY9 871 aaKnown RBP15.1■□□□□ 0.01
SCARB1-204ENST00000535005 CHD1LQ86WJ1 897 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 C7orf43Q8WVR3 580 aa15.1■□□□□ 0.01
SCARB1-204ENST00000535005 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
SCARB1-204ENST00000535005 DAXXQ9UER7 740 aaPredicted RBP15.1■□□□□ 0.01
SCARB1-204ENST00000535005 APBB1O00213 710 aa15.09■□□□□ 0.01
SCARB1-204ENST00000535005 CC2D2BQ6DHV5 1058 aa15.09■□□□□ 0.01
SCARB1-204ENST00000535005 FHDC1Q9C0D6 1143 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-204ENST00000535005 AKAP2Q9Y2D5 859 aa15.09■□□□□ 0.01
SCARB1-204ENST00000535005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.09■□□□□ 0.01
SCARB1-204ENST00000535005 SMARCA5O60264 1052 aaPredicted RBP15.08■□□□□ 0.01
SCARB1-204ENST00000535005 KLHL34Q8N239 644 aa15.08■□□□□ 0.01
SCARB1-204ENST00000535005 CLASRPQ8N2M8 674 aaKnown RBP15.08■□□□□ 0.01
SCARB1-204ENST00000535005 PODXL2Q9NZ53 605 aa15.08■□□□□ 0.01
SCARB1-204ENST00000535005 LRRC37AA6NMS7 1700 aa15.08■□□□□ 0
SCARB1-204ENST00000535005 FGFR2P21802 821 aa15.08■□□□□ 0
SCARB1-204ENST00000535005 TNNI3KQ59H18 835 aa15.08■□□□□ 0
SCARB1-204ENST00000535005 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
SCARB1-204ENST00000535005 FPGT-TNNI3KV9GXZ4 949 aa15.08■□□□□ 0
SCARB1-204ENST00000535005 XDHP47989 1333 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 SLX4Q8IY92 1834 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 SPEF2Q9C093 1822 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 UBE4AQ14139 1066 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 GRIPAP1Q4V328 841 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 DALRD3Q5D0E6 543 aaKnown RBP15.07■□□□□ 0
SCARB1-204ENST00000535005 NLGN2Q8NFZ4 835 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 HELBQ8NG08 1087 aaPredicted RBP15.07■□□□□ 0
SCARB1-204ENST00000535005 EAF2Q96CJ1 260 aaPredicted RBP15.07■□□□□ 0
SCARB1-204ENST00000535005 SYT17Q9BSW7 474 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 LNPKQ9C0E8 428 aa15.07■□□□□ 0
SCARB1-204ENST00000535005 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
SCARB1-204ENST00000535005 PUM3Q15397 648 aaKnown RBP15.06■□□□□ 0
SCARB1-204ENST00000535005 NFKBIBQ15653 356 aa15.06■□□□□ 0
SCARB1-204ENST00000535005 LEMD3Q9Y2U8 911 aa15.06■□□□□ 0
SCARB1-204ENST00000535005 TAF5LO75529 589 aa15.06■□□□□ 0
SCARB1-204ENST00000535005 GPSM2P81274 684 aa15.06■□□□□ 0
SCARB1-204ENST00000535005 ATP2B3Q16720 1220 aa15.06■□□□□ 0
SCARB1-204ENST00000535005 LPIN2Q92539 896 aa15.06■□□□□ 0
SCARB1-204ENST00000535005 BRCA1P38398 1863 aaKnown RBP15.05■□□□□ 0
SCARB1-204ENST00000535005 ZNF609O15014 1411 aa15.05■□□□□ 0
SCARB1-204ENST00000535005 SNED1Q8TER0 1413 aa15.05■□□□□ 0
SCARB1-204ENST00000535005 A0A1B0GUL7 405 aa15.05■□□□□ -0
SCARB1-204ENST00000535005 ATP2B4P23634 1241 aa15.05■□□□□ -0
SCARB1-204ENST00000535005 SALL3Q9BXA9 1300 aa15.05■□□□□ -0
SCARB1-204ENST00000535005 A0A1B0GUL6 1792 aa15.05■□□□□ -0
SCARB1-204ENST00000535005 TIMM10P62072 90 aa15.04■□□□□ -0
SCARB1-204ENST00000535005 SOGA3Q5TF21 947 aa15.04■□□□□ -0
SCARB1-204ENST00000535005 SLC51AQ86UW1 340 aa15.04■□□□□ -0
SCARB1-204ENST00000535005 AACSQ86V21 672 aa15.04■□□□□ -0
SCARB1-204ENST00000535005 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
SCARB1-204ENST00000535005 MPNDQ8N594 471 aa15.04■□□□□ -0
SCARB1-204ENST00000535005 ANKIB1Q9P2G1 1089 aa15.04■□□□□ -0
SCARB1-204ENST00000535005 NSFL1CQ9UNZ2 370 aaKnown RBP15.04■□□□□ -0
SCARB1-204ENST00000535005 IFIT2P09913 472 aaKnown RBP15.03■□□□□ -0
SCARB1-204ENST00000535005 SLC5A1P13866 664 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 C15orf52Q6ZUT6 534 aaKnown RBP15.03■□□□□ -0
SCARB1-204ENST00000535005 ZNF804BA4D1E1 1349 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 LTBP1Q14766 1721 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 C21orf2O43822 256 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 IFIT1P09914 478 aaKnown RBP15.03■□□□□ -0
SCARB1-204ENST00000535005 CCDC93Q567U6 631 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 OLFM4Q6UX06 510 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 RTKN2Q8IZC4 609 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 TBC1D16Q8TBP0 767 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms