RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 RPAP1Q9BWH6 1393 aaPredicted RBP18.92■□□□□ 0.62
ATP2C1-224ENST00000533801 CASP7P55210 303 aa18.92■□□□□ 0.62
ATP2C1-224ENST00000533801 SCARF1Q14162 830 aa18.92■□□□□ 0.62
ATP2C1-224ENST00000533801 RABL6Q3YEC7 729 aaPredicted RBP18.92■□□□□ 0.62
ATP2C1-224ENST00000533801 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
ATP2C1-224ENST00000533801 ITGA6P23229 1130 aa18.91■□□□□ 0.62
ATP2C1-224ENST00000533801 ZSCAN31Q96LW9 406 aaPredicted RBP18.91■□□□□ 0.62
ATP2C1-224ENST00000533801 HAUS7Q99871 368 aa18.91■□□□□ 0.62
ATP2C1-224ENST00000533801 GPHNQ9NQX3 736 aaPredicted RBP18.91■□□□□ 0.62
ATP2C1-224ENST00000533801 TOMM22Q9NS69 142 aa18.91■□□□□ 0.62
ATP2C1-224ENST00000533801 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
ATP2C1-224ENST00000533801 MSNP26038 577 aaKnown RBP18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 ZAP70P43403 619 aa18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 ST3GAL1Q11201 340 aa18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 TSPY26PQ9H489 355 aa18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 COL5A2P05997 1499 aaPredicted RBP18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 DZIP3Q86Y13 1208 aaKnown RBP18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 SH2B1Q9NRF2 756 aaPredicted RBP18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 MTMR6Q9Y217 621 aa18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 ATP6V1DQ9Y5K8 247 aa18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 C5P01031 1676 aa18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 IRS4O14654 1257 aaPredicted RBP18.9■□□□□ 0.62
ATP2C1-224ENST00000533801 LRSAM1Q6UWE0 723 aa18.89■□□□□ 0.62
ATP2C1-224ENST00000533801 CLEC17AQ6ZS10 378 aa18.89■□□□□ 0.62
ATP2C1-224ENST00000533801 CPDO75976 1380 aa18.89■□□□□ 0.62
ATP2C1-224ENST00000533801 ZNF609O15014 1411 aa18.89■□□□□ 0.61
ATP2C1-224ENST00000533801 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
ATP2C1-224ENST00000533801 COL15A1P39059 1388 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 TOB2Q14106 344 aaPredicted RBP18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 FAM182BQ5T319 152 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 CKAP2LQ8IYA6 745 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 BICD2Q8TD16 824 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 ATP2B3Q16720 1220 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 ATP6V1AP38606 617 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 TCHHQ07283 1943 aa18.88■□□□□ 0.61
ATP2C1-224ENST00000533801 M0R2C6 588 aa18.87■□□□□ 0.61
ATP2C1-224ENST00000533801 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
ATP2C1-224ENST00000533801 STOX1Q6ZVD7 989 aa18.87■□□□□ 0.61
ATP2C1-224ENST00000533801 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
ATP2C1-224ENST00000533801 ZNF445P59923 1031 aa18.87■□□□□ 0.61
ATP2C1-224ENST00000533801 USP25Q9UHP3 1055 aa18.87■□□□□ 0.61
ATP2C1-224ENST00000533801 USP54Q70EL1 1684 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 RXRAP19793 462 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 OSBP2Q969R2 916 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 SLC4A9Q96Q91 983 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 DCCP43146 1447 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 GTF2E1P29083 439 aaPredicted RBP18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 OTUD7BQ6GQQ9 843 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 ANKRD1Q15327 319 aa18.86■□□□□ 0.61
ATP2C1-224ENST00000533801 NPHP1O15259 732 aa18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 RNF113AO15541 343 aaKnown RBP18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 HSPD1P10809 573 aaKnown RBP18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 DDB1Q16531 1140 aa18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 ZNF830Q96NB3 372 aaPredicted RBP18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 ISY1Q9ULR0 285 aaKnown RBP18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 TM6SF1Q9BZW5 370 aa18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 MAST3O60307 1309 aa18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 KRT85P78386 507 aa18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 SPATA32Q96LK8 384 aa18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.61
ATP2C1-224ENST00000533801 KRT32Q14532 448 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 MPHOSPH8Q99549 860 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 RRP12Q5JTH9 1297 aaKnown RBP18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 SLC9C2Q5TAH2 1124 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 NLRP10Q86W26 655 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 CHMP4CQ96CF2 233 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 SEC31BQ9NQW1 1179 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 HMG20BQ9P0W2 317 aa18.84■□□□□ 0.61
ATP2C1-224ENST00000533801 MED23Q9ULK4 1368 aa18.83■□□□□ 0.61
ATP2C1-224ENST00000533801 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.6
ATP2C1-224ENST00000533801 PHF14O94880 888 aa18.83■□□□□ 0.6
ATP2C1-224ENST00000533801 GIGYF2Q6Y7W6 1299 aaKnown RBP18.83■□□□□ 0.6
ATP2C1-224ENST00000533801 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.6
ATP2C1-224ENST00000533801 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.6
ATP2C1-224ENST00000533801 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.6
ATP2C1-224ENST00000533801 RALYLQ86SE5 291 aaKnown RBP18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 AKAP2Q9Y2D5 859 aa18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 UBE2HP62256 183 aa18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 KCNQ2O43526 872 aa18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 TTC6Q86TZ1 520 aa18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 PHRF1Q9P1Y6 1649 aaKnown RBP18.82■□□□□ 0.6
ATP2C1-224ENST00000533801 E7EWF7 191 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 PDCP20941 246 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 SCRN1Q12765 414 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 PHKA1P46020 1223 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 SPC24Q8NBT2 197 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 LMTK3Q96Q04 1460 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 CCDC183Q5T5S1 534 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 TTLL11Q8NHH1 800 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 DENND2AQ9ULE3 1009 aa18.81■□□□□ 0.6
ATP2C1-224ENST00000533801 EPB41L2O43491 1005 aaKnown RBP18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 NKX1-1Q15270 411 aaPredicted RBP18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 CCDC82Q8N4S0 544 aa18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms