RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 KAT6BQ8WYB5 2073 aa20.23■□□□□ 0.83
PHRF1-205ENST00000533464 TAF4BQ92750 862 aa20.23■□□□□ 0.83
PHRF1-205ENST00000533464 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
PHRF1-205ENST00000533464 CPA1P15085 419 aa20.23■□□□□ 0.83
PHRF1-205ENST00000533464 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
PHRF1-205ENST00000533464 ANO6Q4KMQ2 910 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 NAA16Q6N069 864 aaPredicted RBP20.22■□□□□ 0.83
PHRF1-205ENST00000533464 KANK3Q6NY19 840 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 HOXB7P09629 217 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
PHRF1-205ENST00000533464 FAM193AP78312 1265 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 IFIT1BQ5T764 474 aaKnown RBP20.22■□□□□ 0.83
PHRF1-205ENST00000533464 RUFY3Q7L099 469 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 USP19O94966 1318 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 TMCO3Q6UWJ1 677 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 FAM200AQ8TCP9 573 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 SMARCC1Q92922 1105 aaPredicted RBP20.22■□□□□ 0.83
PHRF1-205ENST00000533464 CENPHQ9H3R5 247 aa20.22■□□□□ 0.83
PHRF1-205ENST00000533464 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
PHRF1-205ENST00000533464 APOBRQ0VD83 1088 aa20.21■□□□□ 0.83
PHRF1-205ENST00000533464 DHX32Q7L7V1 743 aaKnown RBP20.21■□□□□ 0.83
PHRF1-205ENST00000533464 MARCKSP29966 332 aaPredicted RBP20.21■□□□□ 0.83
PHRF1-205ENST00000533464 TNIP1Q15025 636 aa20.21■□□□□ 0.83
PHRF1-205ENST00000533464 RAD50Q92878 1312 aa20.21■□□□□ 0.83
PHRF1-205ENST00000533464 TIMM10P62072 90 aa20.21■□□□□ 0.83
PHRF1-205ENST00000533464 PNMA6EA0A0J9YXQ4 647 aa20.2■□□□□ 0.83
PHRF1-205ENST00000533464 FGFR1OPO95684 399 aaKnown RBP20.2■□□□□ 0.83
PHRF1-205ENST00000533464 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.83
PHRF1-205ENST00000533464 KLHDC4Q8TBB5 520 aa20.2■□□□□ 0.83
PHRF1-205ENST00000533464 CUL5Q93034 780 aa20.2■□□□□ 0.83
PHRF1-205ENST00000533464 CCDC102AQ96A19 550 aa20.2■□□□□ 0.83
PHRF1-205ENST00000533464 CALML4Q96GE6 196 aa20.2■□□□□ 0.83
PHRF1-205ENST00000533464 CASQ1P31415 396 aa20.2■□□□□ 0.82
PHRF1-205ENST00000533464 NBPF7P0C2Y1 421 aaPredicted RBP20.2■□□□□ 0.82
PHRF1-205ENST00000533464 ZNF830Q96NB3 372 aaPredicted RBP20.2■□□□□ 0.82
PHRF1-205ENST00000533464 YEATS4O95619 227 aa20.2■□□□□ 0.82
PHRF1-205ENST00000533464 ENOX2Q16206 610 aaKnown RBP20.2■□□□□ 0.82
PHRF1-205ENST00000533464 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
PHRF1-205ENST00000533464 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
PHRF1-205ENST00000533464 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
PHRF1-205ENST00000533464 MTIF2P46199 727 aaKnown RBP20.2■□□□□ 0.82
PHRF1-205ENST00000533464 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 FAM89AQ96GI7 184 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 METTL22Q9BUU2 404 aaPredicted RBP20.19■□□□□ 0.82
PHRF1-205ENST00000533464 TSPYL1Q9H0U9 437 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 SYT1P21579 422 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 MATR3P43243 847 aaKnown RBP eCLIP20.19■□□□□ 0.82
PHRF1-205ENST00000533464 GSTO1P78417 241 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 AMPD3Q01432 767 aa20.19■□□□□ 0.82
PHRF1-205ENST00000533464 PYM1Q9BRP8 204 aaKnown RBP20.18■□□□□ 0.82
PHRF1-205ENST00000533464 DNAJC25Q9H1X3 360 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 KIF20AO95235 890 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 HLA-DOAP06340 250 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 TSPY3P0CV98 308 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 TSPY8P0CW00 308 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 PTPDC1A2A3K4 754 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 PLBD2Q8NHP8 589 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
PHRF1-205ENST00000533464 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
PHRF1-205ENST00000533464 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.823e-7■■■■□ 25.2
PHRF1-205ENST00000533464 AFMP43652 599 aa20.17■□□□□ 0.82
PHRF1-205ENST00000533464 ST5P78524 1137 aa20.17■□□□□ 0.82
PHRF1-205ENST00000533464 TDRD12Q587J7 1177 aaKnown RBP20.17■□□□□ 0.82
PHRF1-205ENST00000533464 SPTLC2O15270 562 aa20.17■□□□□ 0.82
PHRF1-205ENST00000533464 DBNDD2Q9BQY9 259 aa20.17■□□□□ 0.82
PHRF1-205ENST00000533464 EYA2O00167 538 aa20.16■□□□□ 0.82
PHRF1-205ENST00000533464 MAGEB6Q8N7X4 407 aa20.16■□□□□ 0.82
PHRF1-205ENST00000533464 CCDC186Q7Z3E2 898 aa20.16■□□□□ 0.82
PHRF1-205ENST00000533464 HSP90AA4PQ58FG1 418 aa20.16■□□□□ 0.82
PHRF1-205ENST00000533464 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
PHRF1-205ENST00000533464 BMP15O95972 392 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 UBASH3AP57075 661 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 GBP3Q9H0R5 595 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 A0A1B0GUL7 405 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 TNNI3KQ59H18 835 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 FPGT-TNNI3KV9GXZ4 949 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 N4BP3O15049 544 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 SNW1Q13573 536 aaKnown RBP20.15■□□□□ 0.82
PHRF1-205ENST00000533464 C8orf37Q96NL8 207 aa20.15■□□□□ 0.82
PHRF1-205ENST00000533464 VPS36Q86VN1 386 aa20.14■□□□□ 0.82
PHRF1-205ENST00000533464 BTG4Q9NY30 223 aa20.14■□□□□ 0.82
PHRF1-205ENST00000533464 TOM1O60784 492 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 CABP5Q9NP86 173 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
PHRF1-205ENST00000533464 MAGI2Q86UL8 1455 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 USO1O60763 962 aaKnown RBP20.14■□□□□ 0.81
PHRF1-205ENST00000533464 GNAT2P19087 354 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 DNA2P51530 1060 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 TYRO3Q06418 890 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 CCDC150Q8NCX0 1101 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 CRACR2AQ9BSW2 395 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 NEFHP12036 1026 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
PHRF1-205ENST00000533464 SGSM2O43147 1006 aa20.13■□□□□ 0.81
PHRF1-205ENST00000533464 LTKP29376 864 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms