RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PPIP5K2O43314 1243 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 KINO60870 393 aaKnown RBP18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 TPM1P09493 284 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
PPFIA1-222ENST00000532504 LRRC2Q9BYS8 371 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 DEKP35659 375 aaKnown RBP18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 MCMDC2Q4G0Z9 681 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 TCEANC2Q96MN5 208 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 HOMER1Q86YM7 354 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 NCOA7Q8NI08 942 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 XAGE2Q96GT9 111 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 MAP3K15Q6ZN16 1313 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
PPFIA1-222ENST00000532504 PNMA6EA0A0J9YXQ4 647 aa18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 LRRIQ1Q96JM4 1722 aa18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 KCNQ2O43526 872 aa18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 IL6STP40189 918 aaPredicted RBP18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 NIM1KQ8IY84 436 aa18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 NEK1Q96PY6 1258 aa18.42■□□□□ 0.54
PPFIA1-222ENST00000532504 CTSWP56202 376 aa18.41■□□□□ 0.54
PPFIA1-222ENST00000532504 TNNI3KQ59H18 835 aa18.41■□□□□ 0.54
PPFIA1-222ENST00000532504 FPGT-TNNI3KV9GXZ4 949 aa18.41■□□□□ 0.54
PPFIA1-222ENST00000532504 WDR33Q9C0J8 1336 aaKnown RBP18.41■□□□□ 0.54
PPFIA1-222ENST00000532504 RNF113AO15541 343 aaKnown RBP18.41■□□□□ 0.54
PPFIA1-222ENST00000532504 TPM3P06753 285 aa18.41■□□□□ 0.54
PPFIA1-222ENST00000532504 KIF24Q5T7B8 1368 aa18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 SERPINB2P05120 415 aa18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 NDUFB9Q9Y6M9 179 aa18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 TRMT1LQ7Z2T5 733 aaKnown RBP18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 PRKG1Q13976 671 aa18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 CUL5Q93034 780 aa18.4■□□□□ 0.54
PPFIA1-222ENST00000532504 PLCG2P16885 1265 aa18.39■□□□□ 0.54
PPFIA1-222ENST00000532504 ADAMTS13Q76LX8 1427 aa18.39■□□□□ 0.54
PPFIA1-222ENST00000532504 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.53
PPFIA1-222ENST00000532504 TEX11Q8IYF3 940 aa18.39■□□□□ 0.53
PPFIA1-222ENST00000532504 NLRP5P59047 1200 aa18.39■□□□□ 0.53
PPFIA1-222ENST00000532504 KRT85P78386 507 aa18.39■□□□□ 0.53
PPFIA1-222ENST00000532504 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
PPFIA1-222ENST00000532504 EPS15P42566 896 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 ESR2Q92731 530 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 SUPT20HQ8NEM7 779 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 C8orf76Q96K31 380 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 MBD4O95243 580 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 EN1Q05925 392 aaPredicted RBP18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 SSRP1Q08945 709 aaKnown RBP18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 PIK3C2BO00750 1634 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 WTAPQ15007 396 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 LPIN2Q92539 896 aa18.38■□□□□ 0.53
PPFIA1-222ENST00000532504 KIF5BP33176 963 aa18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 DOK7Q18PE1 504 aa18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 SPATA31A6Q5VVP1 1343 aa18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 GIGYF2Q6Y7W6 1299 aaKnown RBP18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 ERBB4Q15303 1308 aa18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 GTF2IP78347 998 aa18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 BRF1Q92994 677 aa18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
PPFIA1-222ENST00000532504 MCM5P33992 734 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 SETD1BQ9UPS6 1966 aaKnown RBP18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 TNNI2P48788 182 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 USP44Q9H0E7 712 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 LIMCH1Q9UPQ0 1083 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 METAP2P50579 478 aaKnown RBP eCLIP18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 CEP170BQ9Y4F5 1589 aaPredicted RBP18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 SPATA32Q96LK8 384 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 KRT23Q9C075 422 aa18.36■□□□□ 0.53
PPFIA1-222ENST00000532504 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 CHST3Q7LGC8 479 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 RNF214Q8ND24 703 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 CCDC194A0A1B0GVG4 234 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 MMP10P09238 476 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 KLF18A0A0U1RQI7 1052 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 DHX8Q14562 1220 aaKnown RBP18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 MROH5Q6ZUA9 1318 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 SLC26A6Q9BXS9 759 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 GREM2Q9H772 168 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
PPFIA1-222ENST00000532504 HEG1Q9ULI3 1381 aa18.34■□□□□ 0.53
PPFIA1-222ENST00000532504 TCP10Q12799 353 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms