RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GPR101Q96P66 508 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 MEIS3Q99687 375 aa17.56■□□□□ 0.4
TSPAN4-220ENST00000532375 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
TSPAN4-220ENST00000532375 DDNO94850 711 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-220ENST00000532375 RLBP1P12271 317 aa17.55■□□□□ 0.4
TSPAN4-220ENST00000532375 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
TSPAN4-220ENST00000532375 A0A1B0GUL6 1792 aa17.55■□□□□ 0.4
TSPAN4-220ENST00000532375 XDHP47989 1333 aa17.54■□□□□ 0.4
TSPAN4-220ENST00000532375 KDM2BQ8NHM5 1336 aa17.54■□□□□ 0.4
TSPAN4-220ENST00000532375 IGHMBP2P38935 993 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-220ENST00000532375 JDP2Q8WYK2 163 aa17.54■□□□□ 0.4
TSPAN4-220ENST00000532375 RRAGCQ9HB90 399 aa17.54■□□□□ 0.4
TSPAN4-220ENST00000532375 YDJCA8MPS7 323 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 C6orf229H3BNL8 230 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 WASHC4Q2M389 1173 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 DPY19L2Q6NUT2 758 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 ANKIB1Q9P2G1 1089 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 ZNRF3Q9ULT6 936 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 CHMP3Q9Y3E7 222 aa17.53■□□□□ 0.4
TSPAN4-220ENST00000532375 SCN9AQ15858 1988 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 UFL1O94874 794 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 UBTFL1P0CB47 393 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 ATP2B4P23634 1241 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 CHRNDQ07001 517 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 MPHOSPH8Q99549 860 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 GGA1Q9UJY5 639 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
TSPAN4-220ENST00000532375 IRS2Q9Y4H2 1338 aa17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 CXCL9Q07325 125 aa17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 NIM1KQ8IY84 436 aa17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-220ENST00000532375 SNAP23O00161 211 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 TXNRD3Q86VQ6 643 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 GPC2Q8N158 579 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 EYA3Q99504 573 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 KCNQ5Q9NR82 932 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 LEMD3Q9Y2U8 911 aa17.5■□□□□ 0.39
TSPAN4-220ENST00000532375 SCN4AP35499 1836 aa17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 GNAI3P08754 354 aa17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 VEGFAP15692 232 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 DOK7Q18PE1 504 aa17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 HELBQ8NG08 1087 aaPredicted RBP17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 ANKRD2Q9GZV1 360 aa17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
TSPAN4-220ENST00000532375 TAF5LO75529 589 aa17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 KLRK1P26718 216 aa17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 EIF6P56537 245 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 MTX1Q13505 466 aa17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 LRRC24Q50LG9 513 aa17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 PANK1Q8TE04 598 aa17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 YTHDC1Q96MU7 727 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-220ENST00000532375 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
TSPAN4-220ENST00000532375 PLIN1O60240 522 aa17.47■□□□□ 0.39
TSPAN4-220ENST00000532375 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-220ENST00000532375 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
TSPAN4-220ENST00000532375 PSME4Q14997 1843 aa17.47■□□□□ 0.39
TSPAN4-220ENST00000532375 ECE2O60344 883 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 RAD17O75943 681 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 TOMM70O94826 608 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 SCNN1DP51172 638 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 CIAPIN1Q6FI81 312 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 VGLL2Q8N8G2 317 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 ZNF646O15015 1829 aaPredicted RBP17.46■□□□□ 0.39
TSPAN4-220ENST00000532375 C1QTNF8P60827 252 aa17.45■□□□□ 0.38
TSPAN4-220ENST00000532375 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
TSPAN4-220ENST00000532375 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-220ENST00000532375 HDAC5Q9UQL6 1122 aa17.45■□□□□ 0.38
TSPAN4-220ENST00000532375 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
TSPAN4-220ENST00000532375 EYA2O00167 538 aa17.44■□□□□ 0.38
TSPAN4-220ENST00000532375 PSMD14O00487 310 aa17.44■□□□□ 0.38
TSPAN4-220ENST00000532375 GNAI2P04899 355 aa17.44■□□□□ 0.38
TSPAN4-220ENST00000532375 FTSJ3Q8IY81 847 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-220ENST00000532375 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
TSPAN4-220ENST00000532375 VIL1P09327 827 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-220ENST00000532375 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
TSPAN4-220ENST00000532375 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
TSPAN4-220ENST00000532375 PODNQ7Z5L7 613 aa17.43■□□□□ 0.38
TSPAN4-220ENST00000532375 MROH5Q6ZUA9 1318 aa17.43■□□□□ 0.38
TSPAN4-220ENST00000532375 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 EPS15P42566 896 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 TNIP1Q15025 636 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 ITPRIPQ8IWB1 547 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms