RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CIAO1O76071 339 aa21.04■□□□□ 0.96
SF3B2-211ENST00000531041 PUS3Q9BZE2 481 aaKnown RBP21.04■□□□□ 0.96
SF3B2-211ENST00000531041 TMX4Q9H1E5 349 aaPredicted RBP21.04■□□□□ 0.96
SF3B2-211ENST00000531041 SBF1O95248 1867 aa21.03■□□□□ 0.96
SF3B2-211ENST00000531041 GOLGB1Q14789 3259 aaKnown RBP21.03■□□□□ 0.96
SF3B2-211ENST00000531041 SNED1Q8TER0 1413 aa21.03■□□□□ 0.96
SF3B2-211ENST00000531041 GRIPAP1Q4V328 841 aa21.03■□□□□ 0.96
SF3B2-211ENST00000531041 LRRC24Q50LG9 513 aa21.03■□□□□ 0.96
SF3B2-211ENST00000531041 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
SF3B2-211ENST00000531041 MINPP1Q9UNW1 487 aa21.03■□□□□ 0.96
SF3B2-211ENST00000531041 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
SF3B2-211ENST00000531041 YBX3P16989 372 aaKnown RBP eCLIP21.02■□□□□ 0.96
SF3B2-211ENST00000531041 CCDC93Q567U6 631 aa21.02■□□□□ 0.96
SF3B2-211ENST00000531041 OLFM4Q6UX06 510 aa21.02■□□□□ 0.96
SF3B2-211ENST00000531041 ATG9AQ7Z3C6 839 aa21.02■□□□□ 0.96
SF3B2-211ENST00000531041 SLC51AQ86UW1 340 aa21.02■□□□□ 0.96
SF3B2-211ENST00000531041 SIL1Q9H173 461 aa21.02■□□□□ 0.96
SF3B2-211ENST00000531041 MROH5Q6ZUA9 1318 aa21.01■□□□□ 0.95
SF3B2-211ENST00000531041 SURF6O75683 361 aaKnown RBP21■□□□□ 0.95
SF3B2-211ENST00000531041 IL15P40933 162 aaPredicted RBP21■□□□□ 0.95
SF3B2-211ENST00000531041 CHRNDQ07001 517 aa21■□□□□ 0.95
SF3B2-211ENST00000531041 RTKN2Q8IZC4 609 aa21■□□□□ 0.95
SF3B2-211ENST00000531041 ANKRD2Q9GZV1 360 aa21■□□□□ 0.95
SF3B2-211ENST00000531041 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
SF3B2-211ENST00000531041 DUOX1Q9NRD9 1551 aa21■□□□□ 0.95
SF3B2-211ENST00000531041 DICER1Q9UPY3 1922 aaKnown RBP21■□□□□ 0.95
SF3B2-211ENST00000531041 XDHP47989 1333 aa20.99■□□□□ 0.95
SF3B2-211ENST00000531041 G3BP1Q13283 466 aaKnown RBP eCLIP20.99■□□□□ 0.95
SF3B2-211ENST00000531041 HDAC1Q13547 482 aaPredicted RBP20.99■□□□□ 0.95
SF3B2-211ENST00000531041 GPR162Q16538 588 aa20.99■□□□□ 0.95
SF3B2-211ENST00000531041 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
SF3B2-211ENST00000531041 MPNDQ8N594 471 aa20.99■□□□□ 0.95
SF3B2-211ENST00000531041 GPSM2P81274 684 aa20.98■□□□□ 0.95
SF3B2-211ENST00000531041 HSP90AB4PQ58FF6 505 aa20.98■□□□□ 0.95
SF3B2-211ENST00000531041 ERICH6BQ5W0A0 696 aa20.98■□□□□ 0.95
SF3B2-211ENST00000531041 ANKIB1Q9P2G1 1089 aa20.98■□□□□ 0.95
SF3B2-211ENST00000531041 NSFL1CQ9UNZ2 370 aaKnown RBP20.98■□□□□ 0.95
SF3B2-211ENST00000531041 METTL24Q5JXM2 366 aa20.97■□□□□ 0.95
SF3B2-211ENST00000531041 DPP8Q6V1X1 898 aaPredicted RBP20.97■□□□□ 0.95
SF3B2-211ENST00000531041 VGLL2Q8N8G2 317 aa20.97■□□□□ 0.95
SF3B2-211ENST00000531041 CHD4Q14839 1912 aa20.97■□□□□ 0.95
SF3B2-211ENST00000531041 ARAP2Q8WZ64 1704 aa20.96■□□□□ 0.95
SF3B2-211ENST00000531041 HELBQ8NG08 1087 aaPredicted RBP20.96■□□□□ 0.95
SF3B2-211ENST00000531041 PSMD1Q99460 953 aa20.96■□□□□ 0.95
SF3B2-211ENST00000531041 RTFDC1Q9BY42 306 aaPredicted RBP20.96■□□□□ 0.95
SF3B2-211ENST00000531041 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
SF3B2-211ENST00000531041 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
SF3B2-211ENST00000531041 EXOC6BQ9Y2D4 811 aa20.96■□□□□ 0.95
SF3B2-211ENST00000531041 LTBP3Q9NS15 1303 aa20.96■□□□□ 0.95
SF3B2-211ENST00000531041 GRIN3BO60391 1043 aa20.95■□□□□ 0.95
SF3B2-211ENST00000531041 TAF5LO75529 589 aa20.95■□□□□ 0.95
SF3B2-211ENST00000531041 SASH1O94885 1247 aa20.95■□□□□ 0.95
SF3B2-211ENST00000531041 PDE8BO95263 885 aa20.95■□□□□ 0.95
SF3B2-211ENST00000531041 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.95
SF3B2-211ENST00000531041 LEMD3Q9Y2U8 911 aa20.95■□□□□ 0.95
SF3B2-211ENST00000531041 NFKBIEO00221 500 aa20.95■□□□□ 0.94
SF3B2-211ENST00000531041 ATP2B4P23634 1241 aa20.95■□□□□ 0.94
SF3B2-211ENST00000531041 FKBP4Q02790 459 aaKnown RBP eCLIP20.95■□□□□ 0.94
SF3B2-211ENST00000531041 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
SF3B2-211ENST00000531041 ARHGAP27Q6ZUM4 889 aa20.95■□□□□ 0.94
SF3B2-211ENST00000531041 ERC1Q8IUD2 1116 aa20.95■□□□□ 0.94
SF3B2-211ENST00000531041 POLLQ9UGP5 575 aa20.95■□□□□ 0.94
SF3B2-211ENST00000531041 GGA1Q9UJY5 639 aa20.95■□□□□ 0.94
SF3B2-211ENST00000531041 RAB11FIP3O75154 756 aa20.94■□□□□ 0.94
SF3B2-211ENST00000531041 SUPT20HQ8NEM7 779 aa20.94■□□□□ 0.94
SF3B2-211ENST00000531041 TBC1D16Q8TBP0 767 aa20.94■□□□□ 0.94
SF3B2-211ENST00000531041 ZNF804BA4D1E1 1349 aa20.93■□□□□ 0.94
SF3B2-211ENST00000531041 UFL1O94874 794 aa20.93■□□□□ 0.94
SF3B2-211ENST00000531041 IGHDP01880 384 aa20.93■□□□□ 0.94
SF3B2-211ENST00000531041 TFCP2Q12800 502 aa20.93■□□□□ 0.94
SF3B2-211ENST00000531041 UBE4AQ14139 1066 aa20.93■□□□□ 0.94
SF3B2-211ENST00000531041 TAOK3Q9H2K8 898 aa20.93■□□□□ 0.94
SF3B2-211ENST00000531041 DCAF8L1A6NGE4 600 aa20.92■□□□□ 0.94
SF3B2-211ENST00000531041 C6orf229H3BNL8 230 aa20.92■□□□□ 0.94
SF3B2-211ENST00000531041 GCC1Q96CN9 775 aa20.92■□□□□ 0.94
SF3B2-211ENST00000531041 VPS33BQ9H267 617 aa20.92■□□□□ 0.94
SF3B2-211ENST00000531041 MYH13Q9UKX3 1938 aa20.91■□□□□ 0.94
SF3B2-211ENST00000531041 WTIPA6NIX2 430 aaPredicted RBP20.91■□□□□ 0.94
SF3B2-211ENST00000531041 KCNJ4P48050 445 aa20.91■□□□□ 0.94
SF3B2-211ENST00000531041 PUM3Q15397 648 aaKnown RBP20.91■□□□□ 0.94
SF3B2-211ENST00000531041 KIF1BPQ96EK5 621 aa20.91■□□□□ 0.94
SF3B2-211ENST00000531041 GPR108Q9NPR9 543 aa20.91■□□□□ 0.94
SF3B2-211ENST00000531041 AKAP2Q9Y2D5 859 aa20.91■□□□□ 0.94
SF3B2-211ENST00000531041 SNAP23O00161 211 aa20.9■□□□□ 0.94
SF3B2-211ENST00000531041 FGFR2P21802 821 aa20.9■□□□□ 0.94
SF3B2-211ENST00000531041 RHPN1Q8TCX5 695 aa20.9■□□□□ 0.94
SF3B2-211ENST00000531041 EYA3Q99504 573 aa20.9■□□□□ 0.94
SF3B2-211ENST00000531041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.9■□□□□ 0.94
SF3B2-211ENST00000531041 RASSF7Q02833 373 aa20.89■□□□□ 0.94
SF3B2-211ENST00000531041 WASHC4Q2M389 1173 aa20.89■□□□□ 0.94
SF3B2-211ENST00000531041 C15orf52Q6ZUT6 534 aaKnown RBP20.89■□□□□ 0.94
SF3B2-211ENST00000531041 SMC5Q8IY18 1101 aa20.89■□□□□ 0.94
SF3B2-211ENST00000531041 LPIN2Q92539 896 aa20.89■□□□□ 0.94
SF3B2-211ENST00000531041 MED23Q9ULK4 1368 aa20.89■□□□□ 0.93
SF3B2-211ENST00000531041 PSME4Q14997 1843 aa20.88■□□□□ 0.93
SF3B2-211ENST00000531041 ATP2B3Q16720 1220 aa20.88■□□□□ 0.93
SF3B2-211ENST00000531041 LRRCC1Q9C099 1032 aa20.88■□□□□ 0.93
SF3B2-211ENST00000531041 IRS2Q9Y4H2 1338 aa20.88■□□□□ 0.93
SF3B2-211ENST00000531041 ZNF609O15014 1411 aa20.88■□□□□ 0.93
SF3B2-211ENST00000531041 APBB1O00213 710 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms