RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.37
GMDS-208ENST00000530927 DBNDD1Q9H9R9 158 aa23.64■■□□□ 1.37
GMDS-208ENST00000530927 PODXL2Q9NZ53 605 aa23.64■■□□□ 1.37
GMDS-208ENST00000530927 IGHMBP2P38935 993 aaKnown RBP23.63■■□□□ 1.37
GMDS-208ENST00000530927 EIF6P56537 245 aaKnown RBP23.63■■□□□ 1.37
GMDS-208ENST00000530927 DOK7Q18PE1 504 aa23.63■■□□□ 1.37
GMDS-208ENST00000530927 BICC1Q9H694 974 aaKnown RBP23.63■■□□□ 1.37
GMDS-208ENST00000530927 GGA1Q9UJY5 639 aa23.63■■□□□ 1.37
GMDS-208ENST00000530927 ANKRD18BA2A2Z9 1011 aa23.62■■□□□ 1.37
GMDS-208ENST00000530927 TOMM70O94826 608 aa23.62■■□□□ 1.37
GMDS-208ENST00000530927 POTEIP0CG38 1075 aa23.62■■□□□ 1.37
GMDS-208ENST00000530927 POTEJP0CG39 1038 aa23.62■■□□□ 1.37
GMDS-208ENST00000530927 C16orf71Q8IYS4 520 aaPredicted RBP23.62■■□□□ 1.37
GMDS-208ENST00000530927 API5Q9BZZ5 524 aaKnown RBP23.62■■□□□ 1.37
GMDS-208ENST00000530927 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
GMDS-208ENST00000530927 RAD17O75943 681 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 CXCL9Q07325 125 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 IFIT5Q13325 482 aaKnown RBP23.61■■□□□ 1.37
GMDS-208ENST00000530927 ANKRD44Q8N8A2 993 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 L3MBTL3Q96JM7 780 aaPredicted RBP23.61■■□□□ 1.37
GMDS-208ENST00000530927 VPS33BQ9H267 617 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 KCNQ5Q9NR82 932 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 ZNRF3Q9ULT6 936 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 XDHP47989 1333 aa23.61■■□□□ 1.37
GMDS-208ENST00000530927 TRIM27P14373 513 aa23.6■■□□□ 1.37
GMDS-208ENST00000530927 GPC2Q8N158 579 aa23.6■■□□□ 1.37
GMDS-208ENST00000530927 SNAP23O00161 211 aa23.59■■□□□ 1.37
GMDS-208ENST00000530927 CLUAP1Q96AJ1 413 aa23.59■■□□□ 1.37
GMDS-208ENST00000530927 MPHOSPH8Q99549 860 aa23.59■■□□□ 1.37
GMDS-208ENST00000530927 A0A1B0GUL6 1792 aa23.59■■□□□ 1.37
GMDS-208ENST00000530927 KLRK1P26718 216 aa23.59■■□□□ 1.37
GMDS-208ENST00000530927 CCT4P50991 539 aaKnown RBP23.59■■□□□ 1.37
GMDS-208ENST00000530927 HELBQ8NG08 1087 aaPredicted RBP23.59■■□□□ 1.37
GMDS-208ENST00000530927 ECE2O60344 883 aa23.58■■□□□ 1.36
GMDS-208ENST00000530927 SCNN1DP51172 638 aa23.58■■□□□ 1.36
GMDS-208ENST00000530927 CHRNDQ07001 517 aa23.58■■□□□ 1.36
GMDS-208ENST00000530927 CCDC57Q2TAC2 916 aa23.58■■□□□ 1.36
GMDS-208ENST00000530927 ARHGAP45Q92619 1136 aa23.58■■□□□ 1.36
GMDS-208ENST00000530927 EYA3Q99504 573 aa23.58■■□□□ 1.36
GMDS-208ENST00000530927 SCN4AP35499 1836 aa23.57■■□□□ 1.36
GMDS-208ENST00000530927 TAF5LO75529 589 aa23.57■■□□□ 1.36
GMDS-208ENST00000530927 RABL6Q3YEC7 729 aaPredicted RBP23.57■■□□□ 1.36
GMDS-208ENST00000530927 ATF7IPQ6VMQ6 1270 aa23.57■■□□□ 1.36
GMDS-208ENST00000530927 TXNRD3Q86VQ6 643 aa23.57■■□□□ 1.36
GMDS-208ENST00000530927 RBM46Q8TBY0 533 aaKnown RBP23.57■■□□□ 1.36
GMDS-208ENST00000530927 MEIS3Q99687 375 aa23.57■■□□□ 1.36
GMDS-208ENST00000530927 ZC3H12CQ9C0D7 883 aaKnown RBP23.57■■□□□ 1.36
GMDS-208ENST00000530927 TAF1DQ9H5J8 278 aaPredicted RBP23.57■■□□□ 1.36
GMDS-208ENST00000530927 SCN9AQ15858 1988 aa23.57■■□□□ 1.36
GMDS-208ENST00000530927 ATP2B4P23634 1241 aa23.56■■□□□ 1.36
GMDS-208ENST00000530927 KLHDC4Q8TBB5 520 aa23.56■■□□□ 1.36
GMDS-208ENST00000530927 PUS3Q9BZE2 481 aaKnown RBP23.56■■□□□ 1.36
GMDS-208ENST00000530927 SHTN1A0MZ66 631 aa23.55■■□□□ 1.36
GMDS-208ENST00000530927 EPS15P42566 896 aa23.55■■□□□ 1.36
GMDS-208ENST00000530927 TAF7LQ5H9L4 462 aa23.55■■□□□ 1.36
GMDS-208ENST00000530927 CIAPIN1Q6FI81 312 aa23.55■■□□□ 1.36
GMDS-208ENST00000530927 HACL1Q9UJ83 578 aa23.55■■□□□ 1.36
GMDS-208ENST00000530927 ZBTB12Q9Y330 459 aaPredicted RBP23.55■■□□□ 1.36
GMDS-208ENST00000530927 CEP350Q5VT06 3117 aa23.55■■□□□ 1.36
GMDS-208ENST00000530927 GMPSP49915 693 aaPredicted RBP23.54■■□□□ 1.36
GMDS-208ENST00000530927 INTS3Q68E01 1043 aaKnown RBP23.54■■□□□ 1.36
GMDS-208ENST00000530927 IQCA1LA6NCM1 817 aa23.53■■□□□ 1.36
GMDS-208ENST00000530927 PSMD14O00487 310 aa23.53■■□□□ 1.36
GMDS-208ENST00000530927 PLIN1O60240 522 aa23.53■■□□□ 1.36
GMDS-208ENST00000530927 EPHX2P34913 555 aa23.53■■□□□ 1.36
GMDS-208ENST00000530927 EAPPQ56P03 285 aaPredicted RBP23.53■■□□□ 1.36
GMDS-208ENST00000530927 LDHAL6AQ6ZMR3 332 aa23.53■■□□□ 1.36
GMDS-208ENST00000530927 IPO8O15397 1037 aaKnown RBP23.52■■□□□ 1.36
GMDS-208ENST00000530927 UBTFL1P0CB47 393 aaPredicted RBP23.52■■□□□ 1.36
GMDS-208ENST00000530927 CNNM1Q9NRU3 951 aa23.52■■□□□ 1.36
GMDS-208ENST00000530927 LRRFIP2Q9Y608 721 aaKnown RBP23.52■■□□□ 1.36
GMDS-208ENST00000530927 ZNF804BA4D1E1 1349 aa23.52■■□□□ 1.36
GMDS-208ENST00000530927 LRRC24Q50LG9 513 aa23.51■■□□□ 1.35
GMDS-208ENST00000530927 ZKSCAN2Q63HK3 967 aa23.51■■□□□ 1.35
GMDS-208ENST00000530927 TMEM57Q8N5G2 664 aa23.51■■□□□ 1.35
GMDS-208ENST00000530927 ANKRD2Q9GZV1 360 aa23.51■■□□□ 1.35
GMDS-208ENST00000530927 MED23Q9ULK4 1368 aa23.51■■□□□ 1.35
GMDS-208ENST00000530927 G3V3G9 751 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 RLBP1P12271 317 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 DCAF8Q5TAQ9 597 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 SMC1BQ8NDV3 1235 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 ADAMTSL1Q8N6G6 1762 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 HSPA6P17066 643 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 GPRC5DQ9NZD1 345 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 LEMD3Q9Y2U8 911 aa23.5■■□□□ 1.35
GMDS-208ENST00000530927 IRS2Q9Y4H2 1338 aa23.49■■□□□ 1.35
GMDS-208ENST00000530927 LMOD1P29536 600 aaPredicted RBP23.49■■□□□ 1.35
GMDS-208ENST00000530927 KCNJ4P48050 445 aa23.49■■□□□ 1.35
GMDS-208ENST00000530927 RFX5P48382 616 aaPredicted RBP23.49■■□□□ 1.35
GMDS-208ENST00000530927 HTRA3P83110 453 aa23.49■■□□□ 1.35
GMDS-208ENST00000530927 FSTL1Q12841 308 aa23.49■■□□□ 1.35
GMDS-208ENST00000530927 TNIP1Q15025 636 aa23.49■■□□□ 1.35
GMDS-208ENST00000530927 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
GMDS-208ENST00000530927 RIPOR2Q9Y4F9 1068 aa23.48■■□□□ 1.35
GMDS-208ENST00000530927 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
GMDS-208ENST00000530927 MXD3Q9BW11 206 aa23.47■■□□□ 1.35
GMDS-208ENST00000530927 CLEC11AQ9Y240 323 aa23.47■■□□□ 1.35
GMDS-208ENST00000530927 CHADLQ6NUI6 762 aa23.46■■□□□ 1.35
GMDS-208ENST00000530927 PSME4Q14997 1843 aa23.45■■□□□ 1.35
GMDS-208ENST00000530927 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms