RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 SF3B3Q15393 1217 aaKnown RBP7.36□□□□□ -1.23
CTSB-216ENST00000530290 NFE2L2Q16236 605 aa7.36□□□□□ -1.23
CTSB-216ENST00000530290 LRP10Q7Z4F1 713 aa7.36□□□□□ -1.23
CTSB-216ENST00000530290 PODXL2Q9NZ53 605 aa7.36□□□□□ -1.23
CTSB-216ENST00000530290 TRMT112Q9UI30 125 aaKnown RBP7.36□□□□□ -1.23
CTSB-216ENST00000530290 ZBTB12Q9Y330 459 aaPredicted RBP7.36□□□□□ -1.23
CTSB-216ENST00000530290 MYO3BQ8WXR4 1341 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 C6orf229H3BNL8 230 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 HOXB7P09629 217 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 PPP2R1AP30153 589 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 TM4SF4P48230 202 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 SLC17A8Q8NDX2 589 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 ZNF296Q8WUU4 475 aaPredicted RBP7.35□□□□□ -1.23
CTSB-216ENST00000530290 ZC3H12CQ9C0D7 883 aaKnown RBP7.35□□□□□ -1.23
CTSB-216ENST00000530290 DBNDD1Q9H9R9 158 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 TSPYL4Q9UJ04 414 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
CTSB-216ENST00000530290 MYH3P11055 1940 aa7.35□□□□□ -1.23
CTSB-216ENST00000530290 RTL9Q8NET4 1388 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 SZT2Q5T011 3432 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 SHTN1A0MZ66 631 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 UNCXA6NJT0 531 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 G3V3G9 751 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 GPR25O00155 361 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 FKTNO75072 461 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 HCLS1P14317 486 aaPredicted RBP7.34□□□□□ -1.23
CTSB-216ENST00000530290 INHBEP58166 350 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 PDIA6Q15084 440 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 DCAF8Q5TAQ9 597 aa7.34□□□□□ -1.23
CTSB-216ENST00000530290 RSBN1LQ6PCB5 846 aaPredicted RBP7.34□□□□□ -1.23
CTSB-216ENST00000530290 HTTP42858 3142 aa7.34□□□□□ -1.24
CTSB-216ENST00000530290 ECM29Q5VYK3 1845 aa7.34□□□□□ -1.24
CTSB-216ENST00000530290 CUL9Q8IWT3 2517 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 EGFRP00533 1210 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 USP17L8P0C7I0 530 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 TRIM28Q13263 835 aaKnown RBP7.33□□□□□ -1.24
CTSB-216ENST00000530290 ANGEL2Q5VTE6 544 aaKnown RBP7.33□□□□□ -1.24
CTSB-216ENST00000530290 ARMC9Q7Z3E5 817 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 PODNQ7Z5L7 613 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 APOBEC3FQ8IUX4 373 aaKnown RBP7.33□□□□□ -1.24
CTSB-216ENST00000530290 OGFOD1Q8N543 542 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 PLBD2Q8NHP8 589 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 TBC1D16Q8TBP0 767 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 POLLQ9UGP5 575 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 GGA1Q9UJY5 639 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 BRCA2P51587 3418 aa7.33□□□□□ -1.24
CTSB-216ENST00000530290 XDHP47989 1333 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 CENPFP49454 3210 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 MANSC4A6NHS7 340 aaPredicted RBP7.32□□□□□ -1.24
CTSB-216ENST00000530290 UFL1O94874 794 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 ZBTB48P10074 688 aaPredicted RBP7.32□□□□□ -1.24
CTSB-216ENST00000530290 EIF2S2P20042 333 aaKnown RBP7.32□□□□□ -1.24
CTSB-216ENST00000530290 RPS8P62241 208 aaKnown RBP7.32□□□□□ -1.24
CTSB-216ENST00000530290 SCARF1Q14162 830 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
CTSB-216ENST00000530290 COPS6Q7L5N1 327 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 SLC51AQ86UW1 340 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 XAGE3Q8WTP9 111 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 CELF1Q92879 486 aaKnown RBP7.32□□□□□ -1.24
CTSB-216ENST00000530290 ERO1AQ96HE7 468 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 PLEKHF1Q96S99 279 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 ISCA1Q9BUE6 129 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 CHMP4AQ9BY43 222 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 PCGF6Q9BYE7 350 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 MYOZ2Q9NPC6 264 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 MED23Q9ULK4 1368 aa7.32□□□□□ -1.24
CTSB-216ENST00000530290 USP17L3A6NCW0 530 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 USP17L4A6NCW7 530 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 RIMBP2O15034 1052 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 GPSM2P81274 684 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 TTLL12Q14166 644 aaPredicted RBP7.31□□□□□ -1.24
CTSB-216ENST00000530290 ARHGEF6Q15052 776 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 CCDC152Q4G0S7 254 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 OTUD7BQ6GQQ9 843 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 USP17L1Q7RTZ2 530 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 GMLQ99445 158 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 ANKIB1Q9P2G1 1089 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 DBF4Q9UBU7 674 aaPredicted RBP7.31□□□□□ -1.24
CTSB-216ENST00000530290 PPP2R3BQ9Y5P8 575 aa7.31□□□□□ -1.24
CTSB-216ENST00000530290 ZNF646O15015 1829 aaPredicted RBP7.31□□□□□ -1.24
CTSB-216ENST00000530290 IRS4O14654 1257 aaPredicted RBP7.3□□□□□ -1.24
CTSB-216ENST00000530290 TBC1D8O95759 1140 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 ATP2B4P23634 1241 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 DOK7Q18PE1 504 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 PROSER3Q2NL68 480 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 ANKRD13DQ6ZTN6 518 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 ZBTB38Q8NAP3 1195 aaPredicted RBP7.3□□□□□ -1.24
CTSB-216ENST00000530290 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
CTSB-216ENST00000530290 ARMC5Q96C12 935 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 THUMPD2Q9BTF0 503 aaKnown RBP7.3□□□□□ -1.24
CTSB-216ENST00000530290 HYPKQ9NX55 129 aa7.3□□□□□ -1.24
CTSB-216ENST00000530290 COLQQ9Y215 455 aaPredicted RBP7.3□□□□□ -1.24
CTSB-216ENST00000530290 GOLGA2Q08379 1002 aa7.29□□□□□ -1.24
CTSB-216ENST00000530290 AIMP1Q12904 312 aaKnown RBP7.29□□□□□ -1.24
CTSB-216ENST00000530290 MAP3K11Q16584 847 aa7.29□□□□□ -1.24
CTSB-216ENST00000530290 HDGFL1Q5TGJ6 251 aa7.29□□□□□ -1.24
CTSB-216ENST00000530290 STRIP1Q5VSL9 837 aa7.29□□□□□ -1.24
CTSB-216ENST00000530290 OTOP1Q7RTM1 612 aa7.29□□□□□ -1.24
CTSB-216ENST00000530290 PIAS4Q8N2W9 510 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms