RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 ATP5J2-PTCD1G3V325 749 aa14.81□□□□□ -0.04
SF3B2-208ENST00000529994 SLC10A3P09131 477 aa14.81□□□□□ -0.04
SF3B2-208ENST00000529994 RPS12P25398 132 aaKnown RBP14.81□□□□□ -0.04
SF3B2-208ENST00000529994 SULF1Q8IWU6 871 aa14.81□□□□□ -0.04
SF3B2-208ENST00000529994 CDCA5Q96FF9 252 aa14.81□□□□□ -0.04
SF3B2-208ENST00000529994 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
SF3B2-208ENST00000529994 CTU1Q7Z7A3 348 aaKnown RBP14.8□□□□□ -0.04
SF3B2-208ENST00000529994 EYA3Q99504 573 aa14.8□□□□□ -0.04
SF3B2-208ENST00000529994 SF3B3Q15393 1217 aaKnown RBP14.79□□□□□ -0.04
SF3B2-208ENST00000529994 TBC1D16Q8TBP0 767 aa14.79□□□□□ -0.04
SF3B2-208ENST00000529994 SCAF8Q9UPN6 1271 aaKnown RBP14.79□□□□□ -0.04
SF3B2-208ENST00000529994 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
SF3B2-208ENST00000529994 G3V3G9 751 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 VIL1P09327 827 aaKnown RBP14.78□□□□□ -0.04
SF3B2-208ENST00000529994 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
SF3B2-208ENST00000529994 ANKRD13DQ6ZTN6 518 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 MOB2Q70IA6 237 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 RASAL3Q86YV0 1011 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 PLBD2Q8NHP8 589 aa14.78□□□□□ -0.04
SF3B2-208ENST00000529994 ZC3H12CQ9C0D7 883 aaKnown RBP14.78□□□□□ -0.04
SF3B2-208ENST00000529994 UFL1O94874 794 aa14.77□□□□□ -0.05
SF3B2-208ENST00000529994 TMPOP42166 694 aaKnown RBP14.77□□□□□ -0.05
SF3B2-208ENST00000529994 RPS8P62241 208 aaKnown RBP14.77□□□□□ -0.05
SF3B2-208ENST00000529994 SCARF1Q14162 830 aa14.77□□□□□ -0.05
SF3B2-208ENST00000529994 ISCA1Q9BUE6 129 aa14.77□□□□□ -0.05
SF3B2-208ENST00000529994 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.05
SF3B2-208ENST00000529994 HPS5Q9UPZ3 1129 aa14.77□□□□□ -0.05
SF3B2-208ENST00000529994 IRS4O14654 1257 aaPredicted RBP14.76□□□□□ -0.05
SF3B2-208ENST00000529994 TBC1D8O95759 1140 aa14.76□□□□□ -0.05
SF3B2-208ENST00000529994 HDGFL1Q5TGJ6 251 aa14.76□□□□□ -0.05
SF3B2-208ENST00000529994 PRPF38BQ5VTL8 546 aaKnown RBP14.76□□□□□ -0.05
SF3B2-208ENST00000529994 SEC31BQ9NQW1 1179 aa14.76□□□□□ -0.05
SF3B2-208ENST00000529994 ANKIB1Q9P2G1 1089 aa14.76□□□□□ -0.05
SF3B2-208ENST00000529994 LMOD3Q0VAK6 560 aa14.75□□□□□ -0.05
SF3B2-208ENST00000529994 PRAMEF18Q5VWM3 479 aa14.75□□□□□ -0.05
SF3B2-208ENST00000529994 CCDC146Q8IYE0 955 aa14.75□□□□□ -0.05
SF3B2-208ENST00000529994 HDAC9Q9UKV0 1011 aa14.75□□□□□ -0.05
SF3B2-208ENST00000529994 PSME4Q14997 1843 aa14.74□□□□□ -0.05
SF3B2-208ENST00000529994 CHL1O00533 1208 aa14.74□□□□□ -0.05
SF3B2-208ENST00000529994 ZNF280AP59817 542 aaPredicted RBP14.74□□□□□ -0.05
SF3B2-208ENST00000529994 RSBN1LQ6PCB5 846 aaPredicted RBP14.74□□□□□ -0.05
SF3B2-208ENST00000529994 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
SF3B2-208ENST00000529994 GGA1Q9UJY5 639 aa14.74□□□□□ -0.05
SF3B2-208ENST00000529994 PAPPA2Q9BXP8 1791 aa14.74□□□□□ -0.05
SF3B2-208ENST00000529994 UBE2Q2LH0YL09 131 aa14.73□□□□□ -0.05
SF3B2-208ENST00000529994 RALBP1Q15311 655 aa14.73□□□□□ -0.05
SF3B2-208ENST00000529994 ZNF296Q8WUU4 475 aaPredicted RBP14.73□□□□□ -0.05
SF3B2-208ENST00000529994 JARID2Q92833 1246 aaPredicted RBP14.73□□□□□ -0.05
SF3B2-208ENST00000529994 MYOZ2Q9NPC6 264 aa14.73□□□□□ -0.05
SF3B2-208ENST00000529994 PODXL2Q9NZ53 605 aa14.73□□□□□ -0.05
SF3B2-208ENST00000529994 MKRN3Q13064 507 aaKnown RBP14.72□□□□□ -0.05
SF3B2-208ENST00000529994 TTLL12Q14166 644 aaPredicted RBP14.72□□□□□ -0.05
SF3B2-208ENST00000529994 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
SF3B2-208ENST00000529994 AGBL3Q8NEM8 1001 aa14.72□□□□□ -0.05
SF3B2-208ENST00000529994 DBF4Q9UBU7 674 aaPredicted RBP14.72□□□□□ -0.05
SF3B2-208ENST00000529994 USP17L8P0C7I0 530 aa14.71□□□□□ -0.05
SF3B2-208ENST00000529994 ZEB1P37275 1124 aaPredicted RBP14.71□□□□□ -0.05
SF3B2-208ENST00000529994 FKBP1BP68106 108 aa14.71□□□□□ -0.05
SF3B2-208ENST00000529994 RIC3Q7Z5B4 369 aa14.71□□□□□ -0.05
SF3B2-208ENST00000529994 HYPKQ9NX55 129 aa14.71□□□□□ -0.05
SF3B2-208ENST00000529994 WTIPA6NIX2 430 aaPredicted RBP14.7□□□□□ -0.06
SF3B2-208ENST00000529994 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
SF3B2-208ENST00000529994 PKN2Q16513 984 aaKnown RBP14.7□□□□□ -0.06
SF3B2-208ENST00000529994 NBPF9Q3BBW0 867 aa14.7□□□□□ -0.06
SF3B2-208ENST00000529994 ZBTB38Q8NAP3 1195 aaPredicted RBP14.7□□□□□ -0.06
SF3B2-208ENST00000529994 GMLQ99445 158 aa14.7□□□□□ -0.06
SF3B2-208ENST00000529994 MXD3Q9BW11 206 aa14.7□□□□□ -0.06
SF3B2-208ENST00000529994 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
SF3B2-208ENST00000529994 MYBBP1AQ9BQG0 1328 aaKnown RBP14.69□□□□□ -0.06
SF3B2-208ENST00000529994 SPEF2Q9C093 1822 aa14.69□□□□□ -0.06
SF3B2-208ENST00000529994 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
SF3B2-208ENST00000529994 DUSP27Q5VZP5 1158 aa14.69□□□□□ -0.06
SF3B2-208ENST00000529994 MYD88Q99836 296 aa14.69□□□□□ -0.06
SF3B2-208ENST00000529994 PITPNM2Q9BZ72 1349 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 ZNF609O15014 1411 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 USP17L3A6NCW0 530 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 GPR25O00155 361 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 PRKG1Q13976 671 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 FBXW7Q969H0 707 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 R3HDMLQ9H3Y0 253 aa14.68□□□□□ -0.06
SF3B2-208ENST00000529994 PHAXQ9H814 394 aaKnown RBP14.68□□□□□ -0.06
SF3B2-208ENST00000529994 XDHP47989 1333 aa14.67□□□□□ -0.06
SF3B2-208ENST00000529994 HOXB7P09629 217 aa14.67□□□□□ -0.06
SF3B2-208ENST00000529994 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
SF3B2-208ENST00000529994 ANKRD18AQ8IVF6 992 aa14.67□□□□□ -0.06
SF3B2-208ENST00000529994 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.67□□□□□ -0.06
SF3B2-208ENST00000529994 ELL2O00472 640 aaPredicted RBP14.66□□□□□ -0.06
SF3B2-208ENST00000529994 PDE8AO60658 829 aa14.66□□□□□ -0.06
SF3B2-208ENST00000529994 TM4SF4P48230 202 aa14.66□□□□□ -0.06
SF3B2-208ENST00000529994 FBXO46Q6PJ61 603 aaPredicted RBP14.66□□□□□ -0.06
SF3B2-208ENST00000529994 ZNF646O15015 1829 aaPredicted RBP14.65□□□□□ -0.06
SF3B2-208ENST00000529994 WNT10BO00744 389 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 FKTNO75072 461 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 SASH1O94885 1247 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 PCCAP05165 728 aaPredicted RBP14.65□□□□□ -0.06
SF3B2-208ENST00000529994 HSP90B1P14625 803 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms