RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PAXIP1Q6ZW49 1069 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-223ENST00000529986 SMC5Q8IY18 1101 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 PPM1EQ8WY54 764 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 VAT1LQ9HCJ6 419 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 EMILIN1Q9Y6C2 1016 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 NSD2O96028 1365 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 KLF18A0A0U1RQI7 1052 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 SF3A3Q12874 501 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■■■□□ 14.9
CTNND1-223ENST00000529986 RSRC1Q96IZ7 334 aaKnown RBP8.7□□□□□ -1.02
CTNND1-223ENST00000529986 PSMD1Q99460 953 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 DNMT1P26358 1616 aaKnown RBP8.7□□□□□ -1.02
CTNND1-223ENST00000529986 KRT13P13646 458 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 FLIIQ13045 1269 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 CCDC129Q6ZRS4 1044 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 HDXQ7Z353 690 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 TTC16Q8NEE8 873 aa8.7□□□□□ -1.02
CTNND1-223ENST00000529986 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 DAAM2Q86T65 1068 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 IQCA1Q86XH1 822 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 FAM114A1Q8IWE2 563 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 RGS22Q8NE09 1264 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 TCP11L1Q9NUJ3 509 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 AKAP2Q9Y2D5 859 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 DHX29Q7Z478 1369 aaKnown RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 SYCP2Q9BX26 1530 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 DTNBO60941 627 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 TACC1O75410 805 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 ZBTB16Q05516 673 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 KANK3Q6NY19 840 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 CALML4Q96GE6 196 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 RTL1A6NKG5 1358 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 ABCC11Q96J66 1382 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 HGSO14964 777 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 HPDP32754 393 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 IGHMBP2P38935 993 aaKnown RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 MYRIPQ8NFW9 859 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 ERO1AQ96HE7 468 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 PPP1R9BQ96SB3 815 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 MEIS3Q99687 375 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 RBM8AQ9Y5S9 174 aaKnown RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 IKBKGQ9Y6K9 419 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 PLCH2O75038 1416 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 KIF5BP33176 963 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 DDX46Q7L014 1031 aaKnown RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 RAB34Q9BZG1 259 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 KDM5BQ9UGL1 1544 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 CLNS1AP54105 237 aaKnown RBP8.69□□□□□ -1.02
CTNND1-223ENST00000529986 PDE1AP54750 535 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 Q6ZUG5 572 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 ALG1Q9BT22 464 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 CARD6Q9BX69 1037 aa8.69□□□□□ -1.02
CTNND1-223ENST00000529986 DENND4BO75064 1496 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-223ENST00000529986 DHX58Q96C10 678 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 SPAG5Q96R06 1193 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 MBIPQ9NS73 344 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 EXOC1Q9NV70 894 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 CTAGE1Q96RT6 745 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 NOS1P29475 1434 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 TMEM110-MUSTN1A8MSY1 372 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 AK2P54819 239 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 MAP3K12Q12852 859 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 AFAP1L1Q8TED9 768 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 KCNK9Q9NPC2 374 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 ANXA1P04083 346 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 AMPD3Q01432 767 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 KIF5AQ12840 1032 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 GRIPAP1Q4V328 841 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 CHST3Q7LGC8 479 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 CCDC25Q86WR0 208 aa8.68□□□□□ -1.02
CTNND1-223ENST00000529986 CPSF2Q9P2I0 782 aaKnown RBP8.68□□□□□ -1.02
CTNND1-223ENST00000529986 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
CTNND1-223ENST00000529986 SARNPP82979 210 aaKnown RBP8.67□□□□□ -1.02
CTNND1-223ENST00000529986 NME9Q86XW9 330 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 ARID4AP29374 1257 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-223ENST00000529986 GJC1P36383 396 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 CHMP4BP1P59074 171 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 ADGRF5Q8IZF2 1346 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 ABCA5Q8WWZ7 1642 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 NDUFAB1O14561 156 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 KRT86O43790 486 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 INPP5BP32019 993 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 CFAP58Q5T655 872 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 ZNF444Q8N0Y2 327 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-223ENST00000529986 NCOA7Q8NI08 942 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 RHPN1Q8TCX5 695 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 SELENOOQ9BVL4 669 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 A0A087WZG4 1122 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 A0A1B0GUA9 196 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 CPA1P15085 419 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 UBXN1Q04323 297 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 IFI16Q16666 785 aaKnown RBP8.67□□□□□ -1.02
CTNND1-223ENST00000529986 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms