RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	ZSCAN22	P10073	491 aa	Predicted RBP	12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	PIP4K2A	P48426	406 aa	Predicted RBP	12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	CCDC57	Q2TAC2	916 aa		12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	PIGB	Q92521	554 aa		12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	DBNDD2	Q9BQY9	259 aa		12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	CEP126	Q9P2H0	1117 aa		12.19	□□□□□ -0.46
PGAP2-231	ENST00000528216	STX6	O43752	255 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	CSF1R	P07333	972 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	ZFY	P08048	801 aa	Predicted RBP	12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	RPS6KB1	P23443	525 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	SYTL4	Q96C24	671 aa	Predicted RBP	12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	ZBTB3	Q9H5J0	574 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	CHMP3	Q9Y3E7	222 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	LETM1	O95202	739 aa	Predicted RBP	12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	DSCC1	Q9BVC3	393 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	PAG1	Q9NWQ8	432 aa		12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.18	□□□□□ -0.46
PGAP2-231	ENST00000528216	KCNQ2	O43526	872 aa		12.17	□□□□□ -0.46
PGAP2-231	ENST00000528216	HSP90B1	P14625	803 aa	Known RBP	12.17	□□□□□ -0.46
PGAP2-231	ENST00000528216	SF3B2	Q13435	895 aa	Known RBP	12.17	□□□□□ -0.46
PGAP2-231	ENST00000528216	ZSCAN23	Q3MJ62	389 aa		12.17	□□□□□ -0.46
PGAP2-231	ENST00000528216	IL6ST	P40189	918 aa	Predicted RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	PRIM1	P49642	420 aa	Known RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	CCDC173	Q0VFZ6	552 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	CCDC158	Q5M9N0	1113 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	CAVIN1	Q6NZI2	390 aa	Known RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	NOL8	Q76FK4	1167 aa	Known RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	DNAJC10	Q8IXB1	793 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.16	□□□□□ -0.46	3e-6	■■■□□ 19
PGAP2-231	ENST00000528216	MYH3	P11055	1940 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	F13A1	P00488	732 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	CYP19A1	P11511	503 aa	Predicted RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	SYT1	P21579	422 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	IFIT5	Q13325	482 aa	Known RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	ADCK5	Q3MIX3	580 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	ZMYM1	Q5SVZ6	1142 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	PTF1A	Q7RTS3	328 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216	ASAP1	Q9ULH1	1129 aa		12.16	□□□□□ -0.46
PGAP2-231	ENST00000528216		A0A1B0GUL7	405 aa		12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	APBA3	O96018	575 aa		12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	IFIT1	P09914	478 aa	Known RBP	12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	NASP	P49321	788 aa	Predicted RBP	12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	GPT2	Q8TD30	523 aa		12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	JARID2	Q92833	1246 aa	Predicted RBP	12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	NEUROD6	Q96NK8	337 aa		12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	NEK1	Q96PY6	1258 aa		12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	DNAJC2	Q99543	621 aa	Known RBP	12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	KIF3A	Q9Y496	699 aa		12.15	□□□□□ -0.46
PGAP2-231	ENST00000528216	RREB1	Q92766	1687 aa		12.15	□□□□□ -0.47
PGAP2-231	ENST00000528216	RNF113A	O15541	343 aa	Known RBP	12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	GJB2	P29033	226 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	TAF7L	Q5H9L4	462 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	LRSAM1	Q6UWE0	723 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	GAS2L3	Q86XJ1	694 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	CCDC125	Q86Z20	511 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	PPP1R9B	Q96SB3	815 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	CTNNA3	Q9UI47	895 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZNF831	Q5JPB2	1677 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	UBE2H	P62256	183 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	ME3	Q16798	604 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	NLRP10	Q86W26	655 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	CCDC83	Q8IWF9	413 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	FBXL16	Q8N461	479 aa		12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	LLPH	Q9BRT6	129 aa	Known RBP	12.14	□□□□□ -0.47
PGAP2-231	ENST00000528216	DOT1L	Q8TEK3	1739 aa		12.13	□□□□□ -0.47
PGAP2-231	ENST00000528216	RGL2	O15211	777 aa		12.13	□□□□□ -0.47
PGAP2-231	ENST00000528216	HS1BP3	Q53T59	392 aa		12.13	□□□□□ -0.47
PGAP2-231	ENST00000528216	GORAB	Q5T7V8	394 aa		12.13	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZSCAN25	Q6NSZ9	544 aa		12.13	□□□□□ -0.47
PGAP2-231	ENST00000528216	NUP98	P52948	1817 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	ANKRD18B	A2A2Z9	1011 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	GOLIM4	O00461	696 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	CTSW	P56202	376 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	LRRC24	Q50LG9	513 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	TTC39A	Q5SRH9	613 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	DDX46	Q7L014	1031 aa	Known RBP	12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	FAM184A	Q8NB25	1140 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	TRIM44	Q96DX7	344 aa	Predicted RBP	12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	TPCN1	Q9ULQ1	816 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	MTMR6	Q9Y217	621 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	EP400	Q96L91	3159 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	LRP5	O75197	1615 aa		12.12	□□□□□ -0.47
PGAP2-231	ENST00000528216	PDE8A	O60658	829 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	ELP1	O95163	1332 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	TTF1	Q15361	905 aa	Predicted RBP	12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	DEFB132	Q7Z7B7	95 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	BAG6	P46379	1132 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	TIMM10	P62072	90 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	PARP10	Q53GL7	1025 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	LARP1B	Q659C4	914 aa	Known RBP	12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	DHX32	Q7L7V1	743 aa	Known RBP	12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	USP48	Q86UV5	1035 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	RGS22	Q8NE09	1264 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	SMARCC1	Q92922	1105 aa	Predicted RBP	12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	AGXT2	Q9BYV1	514 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms