RNA–Protein interactions for RNA: ENST00000527333.5

CKAP5-208, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 5

Gene CKAP5, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-208ENST00000527333 PIGBQ92521 554 aa11.5□□□□□ -0.57
CKAP5-208ENST00000527333 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 SPTLC1O15269 473 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 KCNQ3O43525 872 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 TLL1O43897 1013 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 CANXP27824 592 aaKnown RBP11.49□□□□□ -0.57
CKAP5-208ENST00000527333 INTS3Q68E01 1043 aaKnown RBP11.49□□□□□ -0.57
CKAP5-208ENST00000527333 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
CKAP5-208ENST00000527333 FAM196AQ6ZSG2 479 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 DDX19BQ9UMR2 479 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 RBM19Q9Y4C8 960 aaKnown RBP11.49□□□□□ -0.57
CKAP5-208ENST00000527333 KCPQ6ZWJ8 1503 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 BTAF1O14981 1849 aa11.49□□□□□ -0.57
CKAP5-208ENST00000527333 HOXB7P09629 217 aa11.48□□□□□ -0.57
CKAP5-208ENST00000527333 G2E3Q7L622 706 aa11.48□□□□□ -0.57
CKAP5-208ENST00000527333 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
CKAP5-208ENST00000527333 API5Q9BZZ5 524 aaKnown RBP11.48□□□□□ -0.57
CKAP5-208ENST00000527333 CICQ96RK0 1608 aaPredicted RBP11.48□□□□□ -0.57
CKAP5-208ENST00000527333 ZNF831Q5JPB2 1677 aa11.48□□□□□ -0.57
CKAP5-208ENST00000527333 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
CKAP5-208ENST00000527333 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
CKAP5-208ENST00000527333 RNF19BQ6ZMZ0 732 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 TTC5Q8N0Z6 440 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 ACSBG1Q96GR2 724 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
CKAP5-208ENST00000527333 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 ATG3Q9NT62 314 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 EP400Q96L91 3159 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
CKAP5-208ENST00000527333 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 C5P01031 1676 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 SPDYE5A6NIY4 337 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 KCNQ2O43526 872 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
CKAP5-208ENST00000527333 SH3D19Q5HYK7 790 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 FAM182BQ5T319 152 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 SYTL4Q96C24 671 aaPredicted RBP11.46□□□□□ -0.57
CKAP5-208ENST00000527333 ZNF496Q96IT1 587 aaPredicted RBP11.46□□□□□ -0.57
CKAP5-208ENST00000527333 FMNL2Q96PY5 1086 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 CHMP4AQ9BY43 222 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 ASAP1Q9ULH1 1129 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.57
CKAP5-208ENST00000527333 PTPRCP08575 1304 aa11.45□□□□□ -0.58
CKAP5-208ENST00000527333 GIGYF1O75420 1035 aaPredicted RBP11.45□□□□□ -0.58
CKAP5-208ENST00000527333 MTMR2Q13614 643 aa11.45□□□□□ -0.58
CKAP5-208ENST00000527333 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
CKAP5-208ENST00000527333 SIRT2Q8IXJ6 389 aa11.45□□□□□ -0.58
CKAP5-208ENST00000527333 SMC5Q8IY18 1101 aa11.45□□□□□ -0.58
CKAP5-208ENST00000527333 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
CKAP5-208ENST00000527333 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
CKAP5-208ENST00000527333 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
CKAP5-208ENST00000527333 LY75O60449 1722 aa11.44□□□□□ -0.58
CKAP5-208ENST00000527333 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
CKAP5-208ENST00000527333 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
CKAP5-208ENST00000527333 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
CKAP5-208ENST00000527333 ITPRIPQ8IWB1 547 aa11.44□□□□□ -0.58
CKAP5-208ENST00000527333 ZBTB3Q9H5J0 574 aa11.44□□□□□ -0.58
CKAP5-208ENST00000527333 TJP1Q07157 1748 aa11.43□□□□□ -0.58
CKAP5-208ENST00000527333 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
CKAP5-208ENST00000527333 PRPF38BQ5VTL8 546 aaKnown RBP11.43□□□□□ -0.58
CKAP5-208ENST00000527333 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
CKAP5-208ENST00000527333 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
CKAP5-208ENST00000527333 TNS1Q9HBL0 1735 aaKnown RBP11.43□□□□□ -0.58
CKAP5-208ENST00000527333 PALLDQ8WX93 1383 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 RGPD3A6NKT7 1758 aaPredicted RBP11.42□□□□□ -0.58
CKAP5-208ENST00000527333 RGPD4Q7Z3J3 1758 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 S1PR4O95977 384 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 MSS51Q4VC12 460 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 CCDC30Q5VVM6 783 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 PTF1AQ7RTS3 328 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 PCMTD1Q96MG8 357 aaPredicted RBP11.42□□□□□ -0.58
CKAP5-208ENST00000527333 TEX13AQ9BXU3 409 aaPredicted RBP11.42□□□□□ -0.58
CKAP5-208ENST00000527333 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
CKAP5-208ENST00000527333 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
CKAP5-208ENST00000527333 COL5A3P25940 1745 aaPredicted RBP11.41□□□□□ -0.58
CKAP5-208ENST00000527333 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
CKAP5-208ENST00000527333 FAM160A2Q8N612 972 aaPredicted RBP11.41□□□□□ -0.58
CKAP5-208ENST00000527333 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 RREB1Q92766 1687 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 SIK1P57059 783 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 FLIIQ13045 1269 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 HDGFL1Q5TGJ6 251 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 LRP10Q7Z4F1 713 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 SLC4A9Q96Q91 983 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
CKAP5-208ENST00000527333 TAF1LQ8IZX4 1826 aa11.39□□□□□ -0.59
CKAP5-208ENST00000527333 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
CKAP5-208ENST00000527333 TRIM37O94972 964 aa11.39□□□□□ -0.59
CKAP5-208ENST00000527333 F6X3S4 739 aa11.38□□□□□ -0.59
CKAP5-208ENST00000527333 PLSCR1O15162 318 aa11.38□□□□□ -0.59
CKAP5-208ENST00000527333 STARD3NLO95772 234 aa11.38□□□□□ -0.59
CKAP5-208ENST00000527333 C8orf34Q49A92 452 aa11.38□□□□□ -0.59
CKAP5-208ENST00000527333 DNAJC10Q8IXB1 793 aa11.38□□□□□ -0.59
CKAP5-208ENST00000527333 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
CKAP5-208ENST00000527333 CHMP4BQ9H444 224 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms