RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 RTKN2Q8IZC4 609 aa11.98□□□□□ -0.49
CKAP5-203ENST00000525248 CHL1O00533 1208 aa11.97□□□□□ -0.49
CKAP5-203ENST00000525248 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
CKAP5-203ENST00000525248 IARSP41252 1262 aaKnown RBP11.97□□□□□ -0.49
CKAP5-203ENST00000525248 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
CKAP5-203ENST00000525248 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
CKAP5-203ENST00000525248 PPP1R42Q7Z4L9 355 aa11.97□□□□□ -0.49
CKAP5-203ENST00000525248 KLRG1Q96E93 195 aa11.97□□□□□ -0.49
CKAP5-203ENST00000525248 UTP14AQ9BVJ6 771 aaKnown RBP11.97□□□□□ -0.49
CKAP5-203ENST00000525248 E2F4Q16254 413 aa11.96□□□□□ -0.49
CKAP5-203ENST00000525248 SYNE4Q8N205 404 aa11.96□□□□□ -0.49
CKAP5-203ENST00000525248 RBM17Q96I25 401 aaKnown RBP11.96□□□□□ -0.49
CKAP5-203ENST00000525248 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CKAP5-203ENST00000525248 RNF123Q5XPI4 1314 aa11.95□□□□□ -0.5
CKAP5-203ENST00000525248 IQCA1LA6NCM1 817 aa11.95□□□□□ -0.5
CKAP5-203ENST00000525248 DPYSL4O14531 572 aa11.95□□□□□ -0.5
CKAP5-203ENST00000525248 EVI5O60447 810 aa11.95□□□□□ -0.5
CKAP5-203ENST00000525248 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
CKAP5-203ENST00000525248 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
CKAP5-203ENST00000525248 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
CKAP5-203ENST00000525248 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
CKAP5-203ENST00000525248 MBIPQ9NS73 344 aa11.95□□□□□ -0.5
CKAP5-203ENST00000525248 ABCC4O15439 1325 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 APAF1O14727 1248 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 NLRP3Q96P20 1036 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 CRAMP1Q96RY5 1269 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 PSMD1Q99460 953 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
CKAP5-203ENST00000525248 LAMB2P55268 1798 aa11.94□□□□□ -0.5
CKAP5-203ENST00000525248 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 LDHDQ86WU2 507 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 LARGE2Q8N3Y3 721 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
CKAP5-203ENST00000525248 HACL1Q9UJ83 578 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 GJA3Q9Y6H8 435 aa11.93□□□□□ -0.5
CKAP5-203ENST00000525248 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
CKAP5-203ENST00000525248 FZD9O00144 591 aa11.92□□□□□ -0.5
CKAP5-203ENST00000525248 PPIP5K2O43314 1243 aa11.92□□□□□ -0.5
CKAP5-203ENST00000525248 HOXB7P09629 217 aa11.92□□□□□ -0.5
CKAP5-203ENST00000525248 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
CKAP5-203ENST00000525248 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
CKAP5-203ENST00000525248 SCN4AP35499 1836 aa11.92□□□□□ -0.5
CKAP5-203ENST00000525248 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 ELL2O00472 640 aaPredicted RBP11.91□□□□□ -0.5
CKAP5-203ENST00000525248 EPHX2P34913 555 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
CKAP5-203ENST00000525248 AOC3Q16853 763 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
CKAP5-203ENST00000525248 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 NIM1KQ8IY84 436 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 GPC2Q8N158 579 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 TMX4Q9H1E5 349 aaPredicted RBP11.91□□□□□ -0.5
CKAP5-203ENST00000525248 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 ATP6V0A2Q9Y487 856 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
CKAP5-203ENST00000525248 DDX60Q8IY21 1712 aaKnown RBP11.91□□□□□ -0.5
CKAP5-203ENST00000525248 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.5
CKAP5-203ENST00000525248 CCDC184Q52MB2 194 aa11.9□□□□□ -0.5
CKAP5-203ENST00000525248 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
CKAP5-203ENST00000525248 DDX46Q7L014 1031 aaKnown RBP11.9□□□□□ -0.5
CKAP5-203ENST00000525248 HYPKQ9NX55 129 aa11.9□□□□□ -0.5
CKAP5-203ENST00000525248 MKRN1Q9UHC7 482 aaKnown RBP11.9□□□□□ -0.5
CKAP5-203ENST00000525248 COL4A1P02462 1669 aa11.9□□□□□ -0.5
CKAP5-203ENST00000525248 DUOX1Q9NRD9 1551 aa11.89□□□□□ -0.51
CKAP5-203ENST00000525248 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
CKAP5-203ENST00000525248 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
CKAP5-203ENST00000525248 GNAI1P63096 354 aa11.89□□□□□ -0.51
CKAP5-203ENST00000525248 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
CKAP5-203ENST00000525248 GRAPQ13588 217 aa11.89□□□□□ -0.51
CKAP5-203ENST00000525248 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
CKAP5-203ENST00000525248 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
CKAP5-203ENST00000525248 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
CKAP5-203ENST00000525248 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
CKAP5-203ENST00000525248 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
CKAP5-203ENST00000525248 SCNN1DP51172 638 aa11.88□□□□□ -0.51
CKAP5-203ENST00000525248 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
CKAP5-203ENST00000525248 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
CKAP5-203ENST00000525248 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
CKAP5-203ENST00000525248 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
CKAP5-203ENST00000525248 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
CKAP5-203ENST00000525248 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
CKAP5-203ENST00000525248 LRRC37AA6NMS7 1700 aa11.88□□□□□ -0.51
CKAP5-203ENST00000525248 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
CKAP5-203ENST00000525248 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
CKAP5-203ENST00000525248 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
CKAP5-203ENST00000525248 PNMA8AQ86V59 439 aaPredicted RBP11.87□□□□□ -0.51
CKAP5-203ENST00000525248 C8orf58Q8NAV2 365 aa11.87□□□□□ -0.51
CKAP5-203ENST00000525248 TAF1P21675 1872 aa11.87□□□□□ -0.51
CKAP5-203ENST00000525248 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
CKAP5-203ENST00000525248 BBOX1O75936 387 aa11.86□□□□□ -0.51
CKAP5-203ENST00000525248 EPS15P42566 896 aa11.86□□□□□ -0.51
CKAP5-203ENST00000525248 MPNDQ8N594 471 aa11.86□□□□□ -0.51
CKAP5-203ENST00000525248 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
CKAP5-203ENST00000525248 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms