RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 SCN9AQ15858 1988 aa18.04■□□□□ 0.48
CSTF3-206ENST00000524827 C2orf69Q8N8R5 385 aa18.03■□□□□ 0.48
CSTF3-206ENST00000524827 TBC1D16Q8TBP0 767 aa18.03■□□□□ 0.48
CSTF3-206ENST00000524827 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
CSTF3-206ENST00000524827 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
CSTF3-206ENST00000524827 IRS4O14654 1257 aaPredicted RBP18.02■□□□□ 0.48
CSTF3-206ENST00000524827 KIF4BQ2VIQ3 1234 aa18.02■□□□□ 0.48
CSTF3-206ENST00000524827 SAGE1Q9NXZ1 904 aa18.02■□□□□ 0.48
CSTF3-206ENST00000524827 PDE4DIPQ5VU43 2346 aa18.01■□□□□ 0.47
CSTF3-206ENST00000524827 ZNF157P51786 506 aaPredicted RBP18.01■□□□□ 0.47
CSTF3-206ENST00000524827 RPS8P62241 208 aaKnown RBP18.01■□□□□ 0.47
CSTF3-206ENST00000524827 KIF23Q02241 960 aaPredicted RBP18.01■□□□□ 0.47
CSTF3-206ENST00000524827 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
CSTF3-206ENST00000524827 CCDC102AQ96A19 550 aa18.01■□□□□ 0.47
CSTF3-206ENST00000524827 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
CSTF3-206ENST00000524827 GGA3Q9NZ52 723 aa18.01■□□□□ 0.47
CSTF3-206ENST00000524827 ASTN2O75129 1339 aaPredicted RBP18■□□□□ 0.47
CSTF3-206ENST00000524827 VIL1P09327 827 aaKnown RBP18■□□□□ 0.47
CSTF3-206ENST00000524827 SULF1Q8IWU6 871 aa18■□□□□ 0.47
CSTF3-206ENST00000524827 ZC3H12CQ9C0D7 883 aaKnown RBP18■□□□□ 0.47
CSTF3-206ENST00000524827 PODXL2Q9NZ53 605 aa18■□□□□ 0.47
CSTF3-206ENST00000524827 UFL1O94874 794 aa17.99■□□□□ 0.47
CSTF3-206ENST00000524827 SLC10A3P09131 477 aa17.99■□□□□ 0.47
CSTF3-206ENST00000524827 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
CSTF3-206ENST00000524827 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
CSTF3-206ENST00000524827 AKAP11Q9UKA4 1901 aa17.98■□□□□ 0.47
CSTF3-206ENST00000524827 TRPA1O75762 1119 aa17.98■□□□□ 0.47
CSTF3-206ENST00000524827 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
CSTF3-206ENST00000524827 CDCA5Q96FF9 252 aa17.98■□□□□ 0.47
CSTF3-206ENST00000524827 SEC31BQ9NQW1 1179 aa17.98■□□□□ 0.47
CSTF3-206ENST00000524827 RNF186Q9NXI6 227 aa17.98■□□□□ 0.47
CSTF3-206ENST00000524827 ZNF609O15014 1411 aa17.98■□□□□ 0.47
CSTF3-206ENST00000524827 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
CSTF3-206ENST00000524827 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
CSTF3-206ENST00000524827 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
CSTF3-206ENST00000524827 PSME4Q14997 1843 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 TNRC18O15417 2968 aaPredicted RBP17.96■□□□□ 0.47
CSTF3-206ENST00000524827 G3V3G9 751 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
CSTF3-206ENST00000524827 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
CSTF3-206ENST00000524827 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
CSTF3-206ENST00000524827 HSP90B1P14625 803 aaKnown RBP17.95■□□□□ 0.46
CSTF3-206ENST00000524827 ANGEL2Q5VTE6 544 aaKnown RBP17.95■□□□□ 0.46
CSTF3-206ENST00000524827 RSBN1LQ6PCB5 846 aaPredicted RBP17.95■□□□□ 0.46
CSTF3-206ENST00000524827 AGBL3Q8NEM8 1001 aa17.95■□□□□ 0.46
CSTF3-206ENST00000524827 PAPPA2Q9BXP8 1791 aa17.94■□□□□ 0.46
CSTF3-206ENST00000524827 SOX10P56693 466 aa17.94■□□□□ 0.46
CSTF3-206ENST00000524827 SCARF1Q14162 830 aa17.94■□□□□ 0.46
CSTF3-206ENST00000524827 CCDC152Q4G0S7 254 aa17.94■□□□□ 0.46
CSTF3-206ENST00000524827 RASAL3Q86YV0 1011 aa17.94■□□□□ 0.46
CSTF3-206ENST00000524827 MYD88Q99836 296 aa17.94■□□□□ 0.46
CSTF3-206ENST00000524827 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
CSTF3-206ENST00000524827 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
CSTF3-206ENST00000524827 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
CSTF3-206ENST00000524827 GMLQ99445 158 aa17.93■□□□□ 0.46
CSTF3-206ENST00000524827 ADAMTS8Q9UP79 889 aa17.93■□□□□ 0.46
CSTF3-206ENST00000524827 PDE8AO60658 829 aa17.92■□□□□ 0.46
CSTF3-206ENST00000524827 CCDC191Q8NCU4 936 aa17.92■□□□□ 0.46
CSTF3-206ENST00000524827 JARID2Q92833 1246 aaPredicted RBP17.92■□□□□ 0.46
CSTF3-206ENST00000524827 MYOZ2Q9NPC6 264 aa17.92■□□□□ 0.46
CSTF3-206ENST00000524827 XDHP47989 1333 aa17.92■□□□□ 0.46
CSTF3-206ENST00000524827 USP17L8P0C7I0 530 aa17.91■□□□□ 0.46
CSTF3-206ENST00000524827 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
CSTF3-206ENST00000524827 FKBP1BP68106 108 aa17.91■□□□□ 0.46
CSTF3-206ENST00000524827 CTU1Q7Z7A3 348 aaKnown RBP17.91■□□□□ 0.46
CSTF3-206ENST00000524827 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
CSTF3-206ENST00000524827 CWC25Q9NXE8 425 aaPredicted RBP17.91■□□□□ 0.46
CSTF3-206ENST00000524827 PITPNM2Q9BZ72 1349 aa17.91■□□□□ 0.46
CSTF3-206ENST00000524827 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
CSTF3-206ENST00000524827 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
CSTF3-206ENST00000524827 USP17L3A6NCW0 530 aa17.89■□□□□ 0.45
CSTF3-206ENST00000524827 USP17L4A6NCW7 530 aa17.89■□□□□ 0.45
CSTF3-206ENST00000524827 ATP2B4P23634 1241 aa17.89■□□□□ 0.45
CSTF3-206ENST00000524827 MOB2Q70IA6 237 aa17.89■□□□□ 0.45
CSTF3-206ENST00000524827 USP17L1Q7RTZ2 530 aa17.89■□□□□ 0.45
CSTF3-206ENST00000524827 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
CSTF3-206ENST00000524827 SCAF8Q9UPN6 1271 aaKnown RBP17.89■□□□□ 0.45
CSTF3-206ENST00000524827 DDX10Q13206 875 aaKnown RBP17.88■□□□□ 0.45
CSTF3-206ENST00000524827 PODNQ7Z5L7 613 aa17.88■□□□□ 0.45
CSTF3-206ENST00000524827 METTL22Q9BUU2 404 aaPredicted RBP17.88■□□□□ 0.45
CSTF3-206ENST00000524827 WTIPA6NIX2 430 aaPredicted RBP17.87■□□□□ 0.45
CSTF3-206ENST00000524827 GNAI1P63096 354 aa17.87■□□□□ 0.45
CSTF3-206ENST00000524827 MED23Q9ULK4 1368 aa17.87■□□□□ 0.45
CSTF3-206ENST00000524827 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
CSTF3-206ENST00000524827 SPEF2Q9C093 1822 aa17.86■□□□□ 0.45
CSTF3-206ENST00000524827 UBE2Q2LH0YL09 131 aa17.86■□□□□ 0.45
CSTF3-206ENST00000524827 DDX58O95786 925 aaKnown RBP17.86■□□□□ 0.45
CSTF3-206ENST00000524827 CTSWP56202 376 aa17.86■□□□□ 0.45
CSTF3-206ENST00000524827 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
CSTF3-206ENST00000524827 PRAMEF18Q5VWM3 479 aa17.86■□□□□ 0.45
CSTF3-206ENST00000524827 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
CSTF3-206ENST00000524827 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
CSTF3-206ENST00000524827 DACT2Q5SW24 774 aa17.85■□□□□ 0.45
CSTF3-206ENST00000524827 MXD3Q9BW11 206 aa17.85■□□□□ 0.45
CSTF3-206ENST00000524827 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
CSTF3-206ENST00000524827 HPS5Q9UPZ3 1129 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms