RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 CCT2P78371 535 aaKnown RBP14.04□□□□□ -0.16
PTPRK-216ENST00000524481 KBTBD3Q8NAB2 608 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 ROBO1Q9Y6N7 1651 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 PHKA1P46020 1223 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 SLC9C2Q5TAH2 1124 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 HAUS7Q99871 368 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 CDCA7Q9BWT1 371 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-216ENST00000524481 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
PTPRK-216ENST00000524481 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
PTPRK-216ENST00000524481 SCN11AQ9UI33 1791 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 ANAPC15P60006 121 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 SLC4A8Q2Y0W8 1093 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 FAM173BQ6P4H8 233 aa14.04□□□□□ -0.16
PTPRK-216ENST00000524481 C5P01031 1676 aa14.03□□□□□ -0.16
PTPRK-216ENST00000524481 GOLGA6L3A6NEY3 463 aa14.03□□□□□ -0.16
PTPRK-216ENST00000524481 EIF5P55010 431 aaKnown RBP14.03□□□□□ -0.16
PTPRK-216ENST00000524481 FIBPO43427 364 aa14.03□□□□□ -0.16
PTPRK-216ENST00000524481 IGHMBP2P38935 993 aaKnown RBP14.03□□□□□ -0.16
PTPRK-216ENST00000524481 MCM2P49736 904 aa14.03□□□□□ -0.16
PTPRK-216ENST00000524481 CIZ1Q9ULV3 898 aaPredicted RBP14.03□□□□□ -0.16
PTPRK-216ENST00000524481 BCAMP50895 628 aa14.02□□□□□ -0.16
PTPRK-216ENST00000524481 NECTIN1Q15223 517 aa14.02□□□□□ -0.16
PTPRK-216ENST00000524481 ERFEQ4G0M1 354 aa14.02□□□□□ -0.16
PTPRK-216ENST00000524481 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.16
PTPRK-216ENST00000524481 MAP4K1Q92918 833 aa14.02□□□□□ -0.16
PTPRK-216ENST00000524481 BRF1Q92994 677 aa14.02□□□□□ -0.16
PTPRK-216ENST00000524481 CEBPZQ03701 1054 aaKnown RBP14.02□□□□□ -0.17
PTPRK-216ENST00000524481 NBPF5PQ86XG9 351 aaPredicted RBP14.02□□□□□ -0.17
PTPRK-216ENST00000524481 CWC22Q9HCG8 908 aaKnown RBP14.02□□□□□ -0.17
PTPRK-216ENST00000524481 SRCAPQ6ZRS2 3230 aa14.02□□□□□ -0.17
PTPRK-216ENST00000524481 PSMA5P28066 241 aa14.02□□□□□ -0.17
PTPRK-216ENST00000524481 GJB2P29033 226 aa14.02□□□□□ -0.17
PTPRK-216ENST00000524481 ME3Q16798 604 aa14.02□□□□□ -0.17
PTPRK-216ENST00000524481 NEK1Q96PY6 1258 aa14.02□□□□□ -0.17
PTPRK-216ENST00000524481 CYP21A2P08686 494 aa14.01□□□□□ -0.17
PTPRK-216ENST00000524481 RRP12Q5JTH9 1297 aaKnown RBP14.01□□□□□ -0.17
PTPRK-216ENST00000524481 OSBP2Q969R2 916 aa14.01□□□□□ -0.17
PTPRK-216ENST00000524481 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
PTPRK-216ENST00000524481 MIGA1Q8NAN2 632 aa14.01□□□□□ -0.17
PTPRK-216ENST00000524481 TPCN1Q9ULQ1 816 aa14.01□□□□□ -0.17
PTPRK-216ENST00000524481 THRAP3Q9Y2W1 955 aaKnown RBP14.01□□□□□ -0.17
PTPRK-216ENST00000524481 ZDHHC9Q9Y397 364 aa14.01□□□□□ -0.17
PTPRK-216ENST00000524481 GUCY1B3Q02153 619 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 Q6ZUG5 572 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
PTPRK-216ENST00000524481 SETDB2Q96T68 719 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 PANK2Q9BZ23 570 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
PTPRK-216ENST00000524481 PDE8BO95263 885 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 RFC4P35249 363 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 CHAF1AQ13111 956 aaPredicted RBP14□□□□□ -0.17
PTPRK-216ENST00000524481 LARP1BQ659C4 914 aaKnown RBP14□□□□□ -0.17
PTPRK-216ENST00000524481 PUS7LQ9H0K6 701 aaKnown RBP14□□□□□ -0.17
PTPRK-216ENST00000524481 QTRT2Q9H974 415 aaKnown RBP14□□□□□ -0.17
PTPRK-216ENST00000524481 ZNF652Q9Y2D9 606 aa14□□□□□ -0.17
PTPRK-216ENST00000524481 M0R2C6 588 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 MCAMP43121 646 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 GYG1P46976 350 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 CCDC102BQ68D86 513 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 GPHNQ9NQX3 736 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 AFF2P51816 1311 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 TRIM37O94972 964 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 TBC1D9BQ66K14 1250 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 RTCBQ9Y3I0 505 aaKnown RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 C3orf67Q6ZVT6 689 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 SEPT12Q8IYM1 358 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 TFCP2L1Q9NZI6 479 aa13.99□□□□□ -0.17
PTPRK-216ENST00000524481 TFIP11Q9UBB9 837 aaKnown RBP13.99□□□□□ -0.17
PTPRK-216ENST00000524481 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 APOBRQ0VD83 1088 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 RNF214Q8ND24 703 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 HSPD1P10809 573 aaKnown RBP13.98□□□□□ -0.17
PTPRK-216ENST00000524481 SYT1P21579 422 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 FAM196AQ6ZSG2 479 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 CCDC144CPQ8IYA2 1237 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 ZNF34Q8IZ26 560 aa13.98□□□□□ -0.17
PTPRK-216ENST00000524481 CSF1RP07333 972 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 RXRAP19793 462 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 CCDC82Q8N4S0 544 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 MAGEB6Q8N7X4 407 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 AK7Q96M32 723 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 RAI14Q9P0K7 980 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 JAK2O60674 1132 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 DDIT3P35638 169 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 AMIGO3Q86WK7 504 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
PTPRK-216ENST00000524481 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 KCPQ6ZWJ8 1503 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 MAST3O60307 1309 aa13.97□□□□□ -0.17
PTPRK-216ENST00000524481 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms