RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 EHD4Q9H223 541 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 CHRDQ9H2X0 955 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 NPHS2Q9NP85 383 aa6.42□□□□□ -1.38
SKP1-212ENST00000523966 AVENQ9NQS1 362 aaPredicted RBP6.42□□□□□ -1.38
SKP1-212ENST00000523966 TERTO14746 1132 aaKnown RBP6.41□□□□□ -1.38
SKP1-212ENST00000523966 ALAS2P22557 587 aa6.41□□□□□ -1.38
SKP1-212ENST00000523966 ADH6P28332 368 aa6.41□□□□□ -1.38
SKP1-212ENST00000523966 PCBP4P57723 403 aaKnown RBP6.41□□□□□ -1.38
SKP1-212ENST00000523966 IRF7Q92985 503 aa6.41□□□□□ -1.38
SKP1-212ENST00000523966 FAM161BQ96MY7 647 aa6.41□□□□□ -1.38
SKP1-212ENST00000523966 NSUN5Q96P11 429 aaKnown RBP6.41□□□□□ -1.38
SKP1-212ENST00000523966 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
SKP1-212ENST00000523966 AK5Q9Y6K8 562 aa6.41□□□□□ -1.38
SKP1-212ENST00000523966 LOC102724428A0A0B4J2F2 783 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 FAM177BA6PVY3 158 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 ARAFP10398 606 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 VAMP1P23763 118 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 SIK1P57059 783 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 TSNAXIP1Q2TAA8 658 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 SRCIN1Q9C0H9 1055 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 DNAJB12Q9NXW2 375 aaKnown RBP6.4□□□□□ -1.38
SKP1-212ENST00000523966 SALL4Q9UJQ4 1053 aa6.4□□□□□ -1.38
SKP1-212ENST00000523966 C2CD2LO14523 706 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 EIF2AK2P19525 551 aaKnown RBP6.39□□□□□ -1.39
SKP1-212ENST00000523966 GPLD1P80108 840 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 MLLT1Q03111 559 aaPredicted RBP6.39□□□□□ -1.39
SKP1-212ENST00000523966 KIAA0319Q5VV43 1072 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 HFE2Q6ZVN8 426 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 GPR161Q8N6U8 529 aaKnown RBP6.39□□□□□ -1.39
SKP1-212ENST00000523966 TMEM87AQ8NBN3 555 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 TRPM4Q8TD43 1214 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
SKP1-212ENST00000523966 BCO2Q9BYV7 579 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 C12orf49Q9H741 205 aa6.39□□□□□ -1.39
SKP1-212ENST00000523966 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
SKP1-212ENST00000523966 NEURL1BA8MQ27 555 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 J3QW42 95 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 KIF4AO95239 1232 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 HOXD8P13378 290 aaPredicted RBP6.38□□□□□ -1.39
SKP1-212ENST00000523966 IRS1P35568 1242 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 ELMSAN1Q6PJG2 1045 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 PI16Q6UXB8 463 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 FAM35AQ86V20 835 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 GOLGA6L1Q8N7Z2 621 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 OSMRQ99650 979 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 LIN7BQ9HAP6 207 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 FAM8A1Q9UBU6 413 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 GDF2Q9UK05 429 aaPredicted RBP6.38□□□□□ -1.39
SKP1-212ENST00000523966 HCN2Q9UL51 889 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 IGF1RP08069 1367 aa6.38□□□□□ -1.39
SKP1-212ENST00000523966 A0A1W2PP55 124 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 SMNDC1O75940 238 aaKnown RBP eCLIP6.37□□□□□ -1.39
SKP1-212ENST00000523966 CPB1P15086 417 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 ADH7P40394 386 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 GAS6Q14393 721 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 NXPE4Q6UWF7 544 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 OXCT2Q9BYC2 517 aaPredicted RBP6.37□□□□□ -1.39
SKP1-212ENST00000523966 ZFYVE1Q9HBF4 777 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 LATS2Q9NRM7 1088 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 GGA1Q9UJY5 639 aa6.37□□□□□ -1.39
SKP1-212ENST00000523966 VSIG8P0DPA2 414 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 GSTT1P30711 240 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 SRSF11Q05519 484 aaKnown RBP6.36□□□□□ -1.39
SKP1-212ENST00000523966 NFX1Q12986 1120 aaKnown RBP6.36□□□□□ -1.39
SKP1-212ENST00000523966 MRPL58Q14197 206 aaKnown RBP6.36□□□□□ -1.39
SKP1-212ENST00000523966 COL13A1Q5TAT6 717 aaPredicted RBP6.36□□□□□ -1.39
SKP1-212ENST00000523966 DTHD1Q6ZMT9 781 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 CEP120Q8N960 986 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 TNFRSF25Q93038 417 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 BACH2Q9BYV9 841 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 RNF19AQ9NV58 838 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 SLC6A14Q9UN76 642 aa6.36□□□□□ -1.39
SKP1-212ENST00000523966 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
SKP1-212ENST00000523966 ELOA3DA6NLF2 546 aaPredicted RBP6.35□□□□□ -1.39
SKP1-212ENST00000523966 ADARB2-AS1A8MUL3 147 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 ZBTB42B2RXF5 422 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 PDE2AO00408 941 aaPredicted RBP6.35□□□□□ -1.39
SKP1-212ENST00000523966 SCAMP3O14828 347 aaKnown RBP6.35□□□□□ -1.39
SKP1-212ENST00000523966 USP17L7P0C7H9 530 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 XRCC5P13010 732 aaKnown RBP6.35□□□□□ -1.39
SKP1-212ENST00000523966 FCGRTP55899 365 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 GRM2Q14416 872 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 CEP135Q66GS9 1140 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 ASAP3Q8TDY4 903 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 CRELD1Q96HD1 420 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 CNTNAP3BQ96NU0 1288 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 ZKSCAN3Q9BRR0 538 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 PBX4Q9BYU1 374 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 CNTNAP3Q9BZ76 1288 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 OSBPL7Q9BZF2 842 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 DZANK1Q9NVP4 752 aa6.35□□□□□ -1.39
SKP1-212ENST00000523966 RGS9O75916 674 aaPredicted RBP6.34□□□□□ -1.39
SKP1-212ENST00000523966 TCF3P15923 654 aa6.34□□□□□ -1.39
SKP1-212ENST00000523966 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
SKP1-212ENST00000523966 PLD4Q96BZ4 506 aa6.34□□□□□ -1.39
SKP1-212ENST00000523966 SMG9Q9H0W8 520 aaKnown RBP6.34□□□□□ -1.39
SKP1-212ENST00000523966 RASSF4Q9H2L5 321 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms