RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ADAMTS8Q9UP79 889 aa33.68■■■□□ 2.98
PVT1-219ENST00000523427 CASP8AP2Q9UKL3 1982 aa33.67■■■□□ 2.98
PVT1-219ENST00000523427 HOXB7P09629 217 aa33.67■■■□□ 2.98
PVT1-219ENST00000523427 COL4A1P02462 1669 aa33.67■■■□□ 2.98
PVT1-219ENST00000523427 LRRC37AA6NMS7 1700 aa33.67■■■□□ 2.98
PVT1-219ENST00000523427 MLLT1Q03111 559 aaPredicted RBP33.66■■■□□ 2.98
PVT1-219ENST00000523427 ZC3H12CQ9C0D7 883 aaKnown RBP33.66■■■□□ 2.98
PVT1-219ENST00000523427 GBA2Q9HCG7 927 aaPredicted RBP33.66■■■□□ 2.98
PVT1-219ENST00000523427 SEC31BQ9NQW1 1179 aa33.66■■■□□ 2.98
PVT1-219ENST00000523427 RTL9Q8NET4 1388 aa33.65■■■□□ 2.98
PVT1-219ENST00000523427 DGKZQ13574 1117 aa33.65■■■□□ 2.98
PVT1-219ENST00000523427 C2orf69Q8N8R5 385 aa33.65■■■□□ 2.98
PVT1-219ENST00000523427 MBIPQ9NS73 344 aa33.65■■■□□ 2.98
PVT1-219ENST00000523427 ELL2O00472 640 aaPredicted RBP33.64■■■□□ 2.98
PVT1-219ENST00000523427 RPS12P25398 132 aaKnown RBP33.64■■■□□ 2.98
PVT1-219ENST00000523427 RGMBQ6NW40 437 aa33.64■■■□□ 2.98
PVT1-219ENST00000523427 JARID2Q92833 1246 aaPredicted RBP33.64■■■□□ 2.98
PVT1-219ENST00000523427 CCDC85AQ96PX6 553 aaPredicted RBP33.64■■■□□ 2.98
PVT1-219ENST00000523427 UFL1O94874 794 aa33.63■■■□□ 2.97
PVT1-219ENST00000523427 GOLGA2Q08379 1002 aa33.63■■■□□ 2.97
PVT1-219ENST00000523427 ANKIB1Q9P2G1 1089 aa33.63■■■□□ 2.97
PVT1-219ENST00000523427 KIF4BQ2VIQ3 1234 aa33.62■■■□□ 2.97
PVT1-219ENST00000523427 MYD88Q99836 296 aa33.62■■■□□ 2.97
PVT1-219ENST00000523427 PHAXQ9H814 394 aaKnown RBP33.62■■■□□ 2.97
PVT1-219ENST00000523427 TRIM28Q13263 835 aaKnown RBP33.61■■■□□ 2.97
PVT1-219ENST00000523427 ASTN2O75129 1339 aaPredicted RBP33.6■■■□□ 2.97
PVT1-219ENST00000523427 ZNF157P51786 506 aaPredicted RBP33.6■■■□□ 2.97
PVT1-219ENST00000523427 ZBTB38Q8NAP3 1195 aaPredicted RBP33.6■■■□□ 2.97
PVT1-219ENST00000523427 GGA3Q9NZ52 723 aa33.6■■■□□ 2.97
PVT1-219ENST00000523427 POLR2AP24928 1970 aaKnown RBP33.6■■■□□ 2.97
PVT1-219ENST00000523427 KIF23Q02241 960 aaPredicted RBP33.59■■■□□ 2.97
PVT1-219ENST00000523427 SULF1Q8IWU6 871 aa33.59■■■□□ 2.97
PVT1-219ENST00000523427 GGA1Q9UJY5 639 aa33.58■■■□□ 2.97
PVT1-219ENST00000523427 FAM155AB1AL88 458 aaPredicted RBP33.57■■■□□ 2.96
PVT1-219ENST00000523427 VIL1P09327 827 aaKnown RBP33.57■■■□□ 2.96
PVT1-219ENST00000523427 CCDC102AQ96A19 550 aa33.56■■■□□ 2.96
PVT1-219ENST00000523427 RGS19P49795 217 aa33.55■■■□□ 2.96
PVT1-219ENST00000523427 CCDC152Q4G0S7 254 aa33.55■■■□□ 2.96
PVT1-219ENST00000523427 PODXL2Q9NZ53 605 aa33.55■■■□□ 2.96
PVT1-219ENST00000523427 HSP90B1P14625 803 aaKnown RBP33.54■■■□□ 2.96
PVT1-219ENST00000523427 TRPA1O75762 1119 aa33.53■■■□□ 2.96
PVT1-219ENST00000523427 CDCA5Q96FF9 252 aa33.53■■■□□ 2.96
PVT1-219ENST00000523427 APAF1O14727 1248 aa33.52■■■□□ 2.96
PVT1-219ENST00000523427 SCN9AQ15858 1988 aa33.51■■■□□ 2.96
PVT1-219ENST00000523427 PDE8AO60658 829 aa33.51■■■□□ 2.95
PVT1-219ENST00000523427 SCARF1Q14162 830 aa33.51■■■□□ 2.95
PVT1-219ENST00000523427 ANGEL2Q5VTE6 544 aaKnown RBP33.51■■■□□ 2.95
PVT1-219ENST00000523427 CCDC191Q8NCU4 936 aa33.51■■■□□ 2.95
PVT1-219ENST00000523427 CWC25Q9NXE8 425 aaPredicted RBP33.51■■■□□ 2.95
PVT1-219ENST00000523427 PCCAP05165 728 aaPredicted RBP33.5■■■□□ 2.95
PVT1-219ENST00000523427 ZNF853P0CG23 659 aa33.5■■■□□ 2.95
PVT1-219ENST00000523427 RSBN1LQ6PCB5 846 aaPredicted RBP33.5■■■□□ 2.95
PVT1-219ENST00000523427 ANKRD18AQ8IVF6 992 aa33.49■■■□□ 2.95
PVT1-219ENST00000523427 C8orf58Q8NAV2 365 aa33.49■■■□□ 2.95
PVT1-219ENST00000523427 IFT57Q9NWB7 429 aa33.49■■■□□ 2.95
PVT1-219ENST00000523427 RNF186Q9NXI6 227 aa33.49■■■□□ 2.95
PVT1-219ENST00000523427 SCAF8Q9UPN6 1271 aaKnown RBP33.49■■■□□ 2.95
PVT1-219ENST00000523427 GNAI1P63096 354 aa33.48■■■□□ 2.95
PVT1-219ENST00000523427 SLC10A3P09131 477 aa33.46■■■□□ 2.95
PVT1-219ENST00000523427 ZNF280AP59817 542 aaPredicted RBP33.46■■■□□ 2.95
PVT1-219ENST00000523427 AGBL3Q8NEM8 1001 aa33.46■■■□□ 2.95
PVT1-219ENST00000523427 METTL22Q9BUU2 404 aaPredicted RBP33.46■■■□□ 2.95
PVT1-219ENST00000523427 XDHP47989 1333 aa33.46■■■□□ 2.95
PVT1-219ENST00000523427 USP17L8P0C7I0 530 aa33.45■■■□□ 2.95
PVT1-219ENST00000523427 CSRNP1Q96S65 589 aa33.45■■■□□ 2.95
PVT1-219ENST00000523427 SAGE1Q9NXZ1 904 aa33.45■■■□□ 2.95
PVT1-219ENST00000523427 WTIPA6NIX2 430 aaPredicted RBP33.44■■■□□ 2.94
PVT1-219ENST00000523427 DDX58O95786 925 aaKnown RBP33.44■■■□□ 2.94
PVT1-219ENST00000523427 CALD1Q05682 793 aaKnown RBP33.44■■■□□ 2.94
PVT1-219ENST00000523427 MYOZ2Q9NPC6 264 aa33.44■■■□□ 2.94
PVT1-219ENST00000523427 MAP3K2Q9Y2U5 619 aa33.44■■■□□ 2.94
PVT1-219ENST00000523427 ATP2B4P23634 1241 aa33.43■■■□□ 2.94
PVT1-219ENST00000523427 FBXW7Q969H0 707 aa33.43■■■□□ 2.94
PVT1-219ENST00000523427 USP17L3A6NCW0 530 aa33.42■■■□□ 2.94
PVT1-219ENST00000523427 USP17L4A6NCW7 530 aa33.42■■■□□ 2.94
PVT1-219ENST00000523427 SLC34A2O95436 690 aa33.42■■■□□ 2.94
PVT1-219ENST00000523427 USP17L1Q7RTZ2 530 aa33.42■■■□□ 2.94
PVT1-219ENST00000523427 CCDC30Q5VVM6 783 aa33.41■■■□□ 2.94
PVT1-219ENST00000523427 PRAMEF18Q5VWM3 479 aa33.41■■■□□ 2.94
PVT1-219ENST00000523427 MOB2Q70IA6 237 aa33.41■■■□□ 2.94
PVT1-219ENST00000523427 SOX10P56693 466 aa33.4■■■□□ 2.94
PVT1-219ENST00000523427 RASAL3Q86YV0 1011 aa33.4■■■□□ 2.94
PVT1-219ENST00000523427 GMLQ99445 158 aa33.4■■■□□ 2.94
PVT1-219ENST00000523427 MXD3Q9BW11 206 aa33.4■■■□□ 2.94
PVT1-219ENST00000523427 CTSWP56202 376 aa33.39■■■□□ 2.94
PVT1-219ENST00000523427 PODNQ7Z5L7 613 aa33.39■■■□□ 2.94
PVT1-219ENST00000523427 CDC5LQ99459 802 aaKnown RBP33.39■■■□□ 2.94
PVT1-219ENST00000523427 TSPYL6Q8N831 410 aa33.38■■■□□ 2.93
PVT1-219ENST00000523427 PRKRIP1Q9H875 184 aaPredicted RBP33.38■■■□□ 2.93
PVT1-219ENST00000523427 PI4KAP2A4QPH2 592 aa33.37■■■□□ 2.93
PVT1-219ENST00000523427 UBE2Q2LH0YL09 131 aa33.37■■■□□ 2.93
PVT1-219ENST00000523427 PI4KAP1Q8N8J0 262 aa33.37■■■□□ 2.93
PVT1-219ENST00000523427 TTLL12Q14166 644 aaPredicted RBP33.36■■■□□ 2.93
PVT1-219ENST00000523427 NBPF9Q3BBW0 867 aa33.36■■■□□ 2.93
PVT1-219ENST00000523427 GREM2Q9H772 168 aa33.36■■■□□ 2.93
PVT1-219ENST00000523427 IGKV5-2P06315 115 aa33.35■■■□□ 2.93
PVT1-219ENST00000523427 TTLL11Q8NHH1 800 aa33.35■■■□□ 2.93
PVT1-219ENST00000523427 MINPP1Q9UNW1 487 aa33.35■■■□□ 2.93
PVT1-219ENST00000523427 AKAP11Q9UKA4 1901 aa33.34■■■□□ 2.93
PVT1-219ENST00000523427 KSR2Q6VAB6 950 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms