RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 GREM2Q9H772 168 aa15.82■□□□□ 0.12
VEGFA-223ENST00000523125 DBNDD1Q9H9R9 158 aa15.82■□□□□ 0.12
VEGFA-223ENST00000523125 KCNQ5Q9NR82 932 aa15.82■□□□□ 0.12
VEGFA-223ENST00000523125 RTL9Q8NET4 1388 aa15.82■□□□□ 0.12
VEGFA-223ENST00000523125 F6X3S4 739 aa15.81■□□□□ 0.12
VEGFA-223ENST00000523125 ZNF646O15015 1829 aaPredicted RBP15.81■□□□□ 0.12
VEGFA-223ENST00000523125 ANKRD18AQ8IVF6 992 aa15.81■□□□□ 0.12
VEGFA-223ENST00000523125 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
VEGFA-223ENST00000523125 ADARB2Q9NS39 739 aaKnown RBP15.81■□□□□ 0.12
VEGFA-223ENST00000523125 A0A1B0GUL6 1792 aa15.8■□□□□ 0.12
VEGFA-223ENST00000523125 SHTN1A0MZ66 631 aa15.8■□□□□ 0.12
VEGFA-223ENST00000523125 ECE2O60344 883 aa15.8■□□□□ 0.12
VEGFA-223ENST00000523125 DOK7Q18PE1 504 aa15.8■□□□□ 0.12
VEGFA-223ENST00000523125 EYA3Q99504 573 aa15.8■□□□□ 0.12
VEGFA-223ENST00000523125 ANKIB1Q9P2G1 1089 aa15.8■□□□□ 0.12
VEGFA-223ENST00000523125 WTIPA6NIX2 430 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 TMEM88BA6NKF7 163 aa15.79■□□□□ 0.12
VEGFA-223ENST00000523125 PSMD14O00487 310 aa15.79■□□□□ 0.12
VEGFA-223ENST00000523125 UFL1O94874 794 aa15.79■□□□□ 0.12
VEGFA-223ENST00000523125 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 FMR1Q06787 632 aaKnown RBP eCLIP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 BEND3Q5T5X7 828 aa15.79■□□□□ 0.12
VEGFA-223ENST00000523125 CDC5LQ99459 802 aaKnown RBP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 ZC3H12CQ9C0D7 883 aaKnown RBP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 BSDC1Q9NW68 430 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 GGA1Q9UJY5 639 aa15.79■□□□□ 0.12
VEGFA-223ENST00000523125 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-223ENST00000523125 CNTNAP1P78357 1384 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 XDHP47989 1333 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 CSF1RP07333 972 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 DPF2Q92785 391 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 MKRN1Q9UHC7 482 aaKnown RBP15.78■□□□□ 0.12
VEGFA-223ENST00000523125 PGAP2Q9UHJ9 254 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 CNOT7Q9UIV1 285 aaKnown RBP15.78■□□□□ 0.12
VEGFA-223ENST00000523125 MINPP1Q9UNW1 487 aa15.78■□□□□ 0.12
VEGFA-223ENST00000523125 TRPM4Q8TD43 1214 aa15.77■□□□□ 0.12
VEGFA-223ENST00000523125 TRAF5O00463 557 aa15.76■□□□□ 0.11
VEGFA-223ENST00000523125 FOXO4P98177 505 aa15.76■□□□□ 0.11
VEGFA-223ENST00000523125 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
VEGFA-223ENST00000523125 MICALL2Q8IY33 904 aa15.76■□□□□ 0.11
VEGFA-223ENST00000523125 VIL1P09327 827 aaKnown RBP15.75■□□□□ 0.11
VEGFA-223ENST00000523125 ITGA6P23229 1130 aa15.75■□□□□ 0.11
VEGFA-223ENST00000523125 ATP2B4P23634 1241 aa15.75■□□□□ 0.11
VEGFA-223ENST00000523125 SLFN5Q08AF3 891 aa15.75■□□□□ 0.11
VEGFA-223ENST00000523125 CST9Q5W186 159 aa15.75■□□□□ 0.11
VEGFA-223ENST00000523125 ZC3H15Q8WU90 426 aaKnown RBP15.75■□□□□ 0.11
VEGFA-223ENST00000523125 RASSF10A6NK89 507 aa15.74■□□□□ 0.11
VEGFA-223ENST00000523125 E9PSI1 815 aa15.74■□□□□ 0.11
VEGFA-223ENST00000523125 H7C1D1 291 aa15.74■□□□□ 0.11
VEGFA-223ENST00000523125 EGFRP00533 1210 aa15.74■□□□□ 0.11
VEGFA-223ENST00000523125 RPS12P25398 132 aaKnown RBP15.74■□□□□ 0.11
VEGFA-223ENST00000523125 CCT4P50991 539 aaKnown RBP15.74■□□□□ 0.11
VEGFA-223ENST00000523125 SAMD7Q7Z3H4 446 aa15.74■□□□□ 0.11
VEGFA-223ENST00000523125 ZNF609O15014 1411 aa15.74■□□□□ 0.11
VEGFA-223ENST00000523125 VEGFBP49765 207 aa15.73■□□□□ 0.11
VEGFA-223ENST00000523125 EPHA10Q5JZY3 1008 aa15.73■□□□□ 0.11
VEGFA-223ENST00000523125 MRPL50Q8N5N7 158 aaKnown RBP15.73■□□□□ 0.11
VEGFA-223ENST00000523125 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
VEGFA-223ENST00000523125 GLIS2Q9BZE0 524 aaPredicted RBP15.73■□□□□ 0.11
VEGFA-223ENST00000523125 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
VEGFA-223ENST00000523125 G3V3G9 751 aa15.72■□□□□ 0.11
VEGFA-223ENST00000523125 CCER2I3L3R5 266 aa15.72■□□□□ 0.11
VEGFA-223ENST00000523125 GRM8O00222 908 aa15.72■□□□□ 0.11
VEGFA-223ENST00000523125 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
VEGFA-223ENST00000523125 HSPA1AP0DMV8 641 aaKnown RBP15.72■□□□□ 0.11
VEGFA-223ENST00000523125 HSPA1BP0DMV9 641 aaKnown RBP15.72■□□□□ 0.11
VEGFA-223ENST00000523125 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
VEGFA-223ENST00000523125 DCAF8Q5TAQ9 597 aa15.72■□□□□ 0.11
VEGFA-223ENST00000523125 TXNRD3Q86VQ6 643 aa15.72■□□□□ 0.11
VEGFA-223ENST00000523125 TRMT2AQ8IZ69 625 aaKnown RBP15.72■□□□□ 0.11
VEGFA-223ENST00000523125 DEFB115Q30KQ5 88 aa15.71■□□□□ 0.11
VEGFA-223ENST00000523125 TBC1D10BQ4KMP7 808 aaPredicted RBP15.71■□□□□ 0.11
VEGFA-223ENST00000523125 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
VEGFA-223ENST00000523125 PODNQ7Z5L7 613 aa15.71■□□□□ 0.11
VEGFA-223ENST00000523125 GMLQ99445 158 aa15.71■□□□□ 0.11
VEGFA-223ENST00000523125 LEMD3Q9Y2U8 911 aa15.71■□□□□ 0.11
VEGFA-223ENST00000523125 THSD7BQ9C0I4 1608 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 ANKRD18BA2A2Z9 1011 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 CHRNDQ07001 517 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 RSBN1LQ6PCB5 846 aaPredicted RBP15.7■□□□□ 0.1
VEGFA-223ENST00000523125 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 CDC37L1Q7L3B6 337 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 SSH1Q8WYL5 1049 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 MPHOSPH8Q99549 860 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
VEGFA-223ENST00000523125 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 USP17L3A6NCW0 530 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 USP17L4A6NCW7 530 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 KLRK1P26718 216 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 ZNF280AP59817 542 aaPredicted RBP15.69■□□□□ 0.1
VEGFA-223ENST00000523125 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
VEGFA-223ENST00000523125 RBM26Q5T8P6 1007 aaKnown RBP15.69■□□□□ 0.1
VEGFA-223ENST00000523125 COL13A1Q5TAT6 717 aaPredicted RBP15.69■□□□□ 0.1
VEGFA-223ENST00000523125 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 USP17L1Q7RTZ2 530 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 AGBL3Q8NEM8 1001 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 KAZALD1Q96I82 304 aa15.69■□□□□ 0.1
VEGFA-223ENST00000523125 ANKRD2Q9GZV1 360 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms