RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 KCNJ4P48050 445 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 GYS2P54840 703 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 SF3A1Q15459 793 aaKnown RBP9□□□□□ -0.97
HDAC3-216ENST00000523088 ZNF530Q6P9A1 599 aaPredicted RBP9□□□□□ -0.97
HDAC3-216ENST00000523088 EP400NLQ6ZTU2 488 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 CATIPQ7Z7H3 387 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 SAMD3Q8N6K7 520 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 WDR70Q9NW82 654 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 ISY1Q9ULR0 285 aaKnown RBP9□□□□□ -0.97
HDAC3-216ENST00000523088 IL16Q14005 1332 aa9□□□□□ -0.97
HDAC3-216ENST00000523088 A6NJR5 290 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 IPO5O00410 1097 aaKnown RBP8.99□□□□□ -0.97
HDAC3-216ENST00000523088 IL13P35225 146 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 MTHFSP49914 203 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 EIF5P55010 431 aaKnown RBP8.99□□□□□ -0.97
HDAC3-216ENST00000523088 RIPK4P57078 832 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 FLIIQ13045 1269 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 TBC1D22AQ8WUA7 517 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 SPOCK3Q9BQ16 436 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 UTP6Q9NYH9 597 aaKnown RBP8.99□□□□□ -0.97
HDAC3-216ENST00000523088 UTRNP46939 3433 aa8.99□□□□□ -0.97
HDAC3-216ENST00000523088 ADAMTS7Q9UKP4 1686 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 MRC1P22897 1456 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 PER1O15534 1290 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-216ENST00000523088 DIAPH1O60610 1272 aaKnown RBP8.98□□□□□ -0.97
HDAC3-216ENST00000523088 OFD1O75665 1012 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CAPN2P17655 700 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 NAP1L1P55209 391 aaKnown RBP8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CABP4P57796 275 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 GABPB1Q06547 395 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-216ENST00000523088 AKAP4Q5JQC9 854 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 SULT6B1Q6IMI4 303 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CCDC73Q6ZRK6 1079 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CCDC102AQ96A19 550 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CHMP4CQ96CF2 233 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 SCYL1Q96KG9 808 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 RSPH9Q9H1X1 276 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CD2APQ9Y5K6 639 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 CNTNAP4Q9C0A0 1308 aa8.98□□□□□ -0.97
HDAC3-216ENST00000523088 KDM6AO15550 1401 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-216ENST00000523088 KIF13BQ9NQT8 1826 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 KIF5CO60282 957 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 GRIN3BO60391 1043 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 WDHD1O75717 1129 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-216ENST00000523088 NAT1P18440 290 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 CCT2P78371 535 aaKnown RBP8.97□□□□□ -0.97
HDAC3-216ENST00000523088 IFT88Q13099 833 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
HDAC3-216ENST00000523088 OTUD6AQ7L8S5 288 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 UBXN4Q92575 508 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 PMM1Q92871 262 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 C22orf23Q9BZE7 217 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 ATG3Q9NT62 314 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 PPP4R2Q9NY27 417 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 WWC3Q9ULE0 1092 aa8.97□□□□□ -0.97
HDAC3-216ENST00000523088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.98
HDAC3-216ENST00000523088 U2SURPO15042 1029 aaKnown RBP8.96□□□□□ -0.98
HDAC3-216ENST00000523088 NOP2P46087 812 aaKnown RBP8.96□□□□□ -0.98
HDAC3-216ENST00000523088 KCNQ4P56696 695 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 GPR162Q16538 588 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 FILIP1Q7Z7B0 1213 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 PCGF5Q86SE9 256 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 RTCBQ9Y3I0 505 aaKnown RBP8.96□□□□□ -0.98
HDAC3-216ENST00000523088 ARIH1Q9Y4X5 557 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-216ENST00000523088 DDX49Q9Y6V7 483 aaKnown RBP8.96□□□□□ -0.98
HDAC3-216ENST00000523088 ZBED9Q6R2W3 1325 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 C4AP0C0L4 1744 aa8.96□□□□□ -0.98
HDAC3-216ENST00000523088 UBR2Q8IWV8 1755 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 H0YHG0 523 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 GNPATO15228 680 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 TRPC1P48995 793 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 VASPP50552 380 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-216ENST00000523088 NLGN1Q8N2Q7 840 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 LINC00116Q8NCU8 138 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
HDAC3-216ENST00000523088 RETREG1Q9H6L5 497 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 PUF60Q9UHX1 559 aaKnown RBP8.95□□□□□ -0.98
HDAC3-216ENST00000523088 NRBP1Q9UHY1 535 aa8.95□□□□□ -0.98
HDAC3-216ENST00000523088 MYH14Q7Z406 1995 aaKnown RBP8.95□□□□□ -0.98
HDAC3-216ENST00000523088 COL3A1P02461 1466 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-216ENST00000523088 TJP1Q07157 1748 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 GOLGB1Q14789 3259 aaKnown RBP8.94□□□□□ -0.98
HDAC3-216ENST00000523088 PPFIA2O75334 1257 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 TNNT3P45378 269 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-216ENST00000523088 RASA3Q14644 834 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 FILIP1LQ4L180 1135 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 TRAPPC3LQ5T215 181 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 JAKMIP3Q5VZ66 844 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 LZTS2Q9BRK4 669 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
HDAC3-216ENST00000523088 SLC52A2Q9HAB3 445 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 SERPINA10Q9UK55 444 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 ODF2LQ9ULJ1 636 aa8.94□□□□□ -0.98
HDAC3-216ENST00000523088 NUDCQ9Y266 331 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms