RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 CCDC158Q5M9N0 1113 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 VPS53Q5VIR6 699 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 RUFY3Q7L099 469 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 CYP46A1Q9Y6A2 500 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 SH3TC1Q8TE82 1336 aa31.05■■■□□ 2.56
COL13A1-214ENST00000522165 PARP10Q53GL7 1025 aa31.04■■■□□ 2.56
COL13A1-214ENST00000522165 METTL24Q5JXM2 366 aa31.04■■■□□ 2.56
COL13A1-214ENST00000522165 USPL1Q5W0Q7 1092 aa31.04■■■□□ 2.56
COL13A1-214ENST00000522165 LIMCH1Q9UPQ0 1083 aa31.04■■■□□ 2.56
COL13A1-214ENST00000522165 ZDHHC9Q9Y397 364 aa31.04■■■□□ 2.56
COL13A1-214ENST00000522165 RPAP1Q9BWH6 1393 aaPredicted RBP31.04■■■□□ 2.56
COL13A1-214ENST00000522165 PTMSP20962 102 aa31.04■■■□□ 2.56
COL13A1-214ENST00000522165 SEC62Q99442 399 aaKnown RBP31.04■■■□□ 2.56
COL13A1-214ENST00000522165 UTP14AQ9BVJ6 771 aaKnown RBP31.04■■■□□ 2.56
COL13A1-214ENST00000522165 GORABQ5T7V8 394 aa31.03■■■□□ 2.56
COL13A1-214ENST00000522165 CNNM1Q9NRU3 951 aa31.03■■■□□ 2.56
COL13A1-214ENST00000522165 PDRG1Q9NUG6 133 aa31.03■■■□□ 2.56
COL13A1-214ENST00000522165 HMG20BQ9P0W2 317 aa31.03■■■□□ 2.56
COL13A1-214ENST00000522165 TTC39AQ5SRH9 613 aa31.02■■■□□ 2.56
COL13A1-214ENST00000522165 ATP2B3Q16720 1220 aa31.02■■■□□ 2.56
COL13A1-214ENST00000522165 CCDC129Q6ZRS4 1044 aa31.02■■■□□ 2.56
COL13A1-214ENST00000522165 PSMA5P28066 241 aa31.01■■■□□ 2.56
COL13A1-214ENST00000522165 TSGA10IPQ3SY00 556 aa31.01■■■□□ 2.56
COL13A1-214ENST00000522165 LINC00116Q8NCU8 138 aa31.01■■■□□ 2.56
COL13A1-214ENST00000522165 HELLSQ9NRZ9 838 aa31.01■■■□□ 2.56
COL13A1-214ENST00000522165 THSD7AQ9UPZ6 1657 aa31■■■□□ 2.55
COL13A1-214ENST00000522165 VGLL2Q8N8G2 317 aa31■■■□□ 2.55
COL13A1-214ENST00000522165 LRP5O75197 1615 aa31■■■□□ 2.55
COL13A1-214ENST00000522165 HCLS1P14317 486 aaPredicted RBP30.99■■■□□ 2.55
COL13A1-214ENST00000522165 ZMYM1Q5SVZ6 1142 aa30.99■■■□□ 2.55
COL13A1-214ENST00000522165 ABCC12Q96J65 1359 aa30.99■■■□□ 2.55
COL13A1-214ENST00000522165 GOLGA6L22H0YM25 854 aa30.99■■■□□ 2.55
COL13A1-214ENST00000522165 NIP7Q9Y221 180 aaKnown RBP eCLIP30.99■■■□□ 2.55
COL13A1-214ENST00000522165 FAM177BA6PVY3 158 aa30.98■■■□□ 2.55
COL13A1-214ENST00000522165 U3KPZ7 1027 aaPredicted RBP30.98■■■□□ 2.55
COL13A1-214ENST00000522165 BCORQ6W2J9 1755 aa30.98■■■□□ 2.55
COL13A1-214ENST00000522165 PTF1AQ7RTS3 328 aa30.97■■■□□ 2.55
COL13A1-214ENST00000522165 TAF6LQ9Y6J9 622 aa30.97■■■□□ 2.55
COL13A1-214ENST00000522165 RNF113AO15541 343 aaKnown RBP30.97■■■□□ 2.55
COL13A1-214ENST00000522165 NTSR2O95665 410 aa30.97■■■□□ 2.55
COL13A1-214ENST00000522165 FKBP4Q02790 459 aaKnown RBP eCLIP30.97■■■□□ 2.55
COL13A1-214ENST00000522165 LARP6Q9BRS8 491 aaKnown RBP30.97■■■□□ 2.55
COL13A1-214ENST00000522165 ZNF652Q9Y2D9 606 aa30.97■■■□□ 2.55
COL13A1-214ENST00000522165 PDE8BO95263 885 aa30.96■■■□□ 2.55
COL13A1-214ENST00000522165 BRD1O95696 1058 aa30.96■■■□□ 2.55
COL13A1-214ENST00000522165 SKOR2Q2VWA4 1001 aaPredicted RBP30.96■■■□□ 2.55
COL13A1-214ENST00000522165 SLFNL1Q499Z3 407 aa30.96■■■□□ 2.55
COL13A1-214ENST00000522165 DDX60Q8IY21 1712 aaKnown RBP30.95■■■□□ 2.55
COL13A1-214ENST00000522165 SCARF1Q14162 830 aa30.95■■■□□ 2.55
COL13A1-214ENST00000522165 CLEC4GQ6UXB4 293 aa30.95■■■□□ 2.55
COL13A1-214ENST00000522165 ZSCAN31Q96LW9 406 aaPredicted RBP30.95■■■□□ 2.55
COL13A1-214ENST00000522165 CNTNAP4Q9C0A0 1308 aa30.95■■■□□ 2.54
COL13A1-214ENST00000522165 BLOC1S2Q6QNY1 142 aa30.94■■■□□ 2.54
COL13A1-214ENST00000522165 HSP90B1P14625 803 aaKnown RBP30.93■■■□□ 2.54
COL13A1-214ENST00000522165 KCNQ4P56696 695 aa30.93■■■□□ 2.54
COL13A1-214ENST00000522165 KRT32Q14532 448 aa30.93■■■□□ 2.54
COL13A1-214ENST00000522165 MROH5Q6ZUA9 1318 aa30.93■■■□□ 2.54
COL13A1-214ENST00000522165 LARGE1O95461 756 aa30.93■■■□□ 2.54
COL13A1-214ENST00000522165 COL9A3Q14050 684 aaPredicted RBP30.93■■■□□ 2.54
COL13A1-214ENST00000522165 LRRFIP1Q32MZ4 808 aaKnown RBP30.93■■■□□ 2.54
COL13A1-214ENST00000522165 ZNF512BQ96KM6 892 aaPredicted RBP30.93■■■□□ 2.54
COL13A1-214ENST00000522165 ALDH8A1Q9H2A2 487 aaPredicted RBP30.93■■■□□ 2.54
COL13A1-214ENST00000522165 SH2B1Q9NRF2 756 aaPredicted RBP30.93■■■□□ 2.54
COL13A1-214ENST00000522165 LAMB2P55268 1798 aa30.92■■■□□ 2.54
COL13A1-214ENST00000522165 RPS6KB1P23443 525 aa30.92■■■□□ 2.54
COL13A1-214ENST00000522165 CERKQ8TCT0 537 aa30.92■■■□□ 2.54
COL13A1-214ENST00000522165 DSCC1Q9BVC3 393 aa30.92■■■□□ 2.54
COL13A1-214ENST00000522165 GZF1Q9H116 711 aaPredicted RBP30.92■■■□□ 2.54
COL13A1-214ENST00000522165 BTAF1O14981 1849 aa30.92■■■□□ 2.54
COL13A1-214ENST00000522165 ZAP70P43403 619 aa30.91■■■□□ 2.54
COL13A1-214ENST00000522165 MCTP1Q6DN14 999 aa30.91■■■□□ 2.54
COL13A1-214ENST00000522165 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.91■■■□□ 2.54
COL13A1-214ENST00000522165 NHSQ6T4R5 1651 aa30.91■■■□□ 2.54
COL13A1-214ENST00000522165 MAST3O60307 1309 aa30.91■■■□□ 2.54
COL13A1-214ENST00000522165 RTL9Q8NET4 1388 aa30.91■■■□□ 2.54
COL13A1-214ENST00000522165 CCDC152Q4G0S7 254 aa30.91■■■□□ 2.54
COL13A1-214ENST00000522165 CYP21A2P08686 494 aa30.89■■■□□ 2.54
COL13A1-214ENST00000522165 SEC31BQ9NQW1 1179 aa30.89■■■□□ 2.54
COL13A1-214ENST00000522165 ZFYP08048 801 aaPredicted RBP30.89■■■□□ 2.54
COL13A1-214ENST00000522165 PUM3Q15397 648 aaKnown RBP30.89■■■□□ 2.54
COL13A1-214ENST00000522165 FGFR2P21802 821 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 MCAMP43121 646 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 RC3H1Q5TC82 1133 aaKnown RBP30.88■■■□□ 2.53
COL13A1-214ENST00000522165 MEX3CQ5U5Q3 659 aaKnown RBP30.88■■■□□ 2.53
COL13A1-214ENST00000522165 PI16Q6UXB8 463 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 GJD4Q96KN9 370 aaPredicted RBP30.88■■■□□ 2.53
COL13A1-214ENST00000522165 AKAP11Q9UKA4 1901 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 RGL2O15211 777 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 ANKRD1Q15327 319 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 LPIN2Q92539 896 aa30.88■■■□□ 2.53
COL13A1-214ENST00000522165 M0R2C6 588 aa30.87■■■□□ 2.53
COL13A1-214ENST00000522165 ME3Q16798 604 aa30.87■■■□□ 2.53
COL13A1-214ENST00000522165 FOXD4L5Q5VV16 416 aaPredicted RBP30.87■■■□□ 2.53
COL13A1-214ENST00000522165 FOXD4L4Q8WXT5 416 aaPredicted RBP30.87■■■□□ 2.53
COL13A1-214ENST00000522165 OSBP2Q969R2 916 aa30.87■■■□□ 2.53
COL13A1-214ENST00000522165 MPHOSPH8Q99549 860 aa30.87■■■□□ 2.53
COL13A1-214ENST00000522165 TPCN1Q9ULQ1 816 aa30.87■■■□□ 2.53
COL13A1-214ENST00000522165 HSPD1P10809 573 aaKnown RBP30.86■■■□□ 2.53
COL13A1-214ENST00000522165 CCDC83Q8IWF9 413 aa30.86■■■□□ 2.53
COL13A1-214ENST00000522165 NEK1Q96PY6 1258 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms