RNA–Protein interactions for RNA: ENST00000518607.1

EFCAB2-214, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-214ENST00000518607 H7C1W4 665 aa28.28■■■□□ 2.12
EFCAB2-214ENST00000518607 RIMBP2O15034 1052 aa28.28■■■□□ 2.12
EFCAB2-214ENST00000518607 LINS1Q8NG48 757 aa28.28■■■□□ 2.12
EFCAB2-214ENST00000518607 TTLL11Q8NHH1 800 aa28.28■■■□□ 2.12
EFCAB2-214ENST00000518607 ZNF521Q96K83 1311 aa28.27■■■□□ 2.12
EFCAB2-214ENST00000518607 CNTNAP1P78357 1384 aa28.26■■■□□ 2.12
EFCAB2-214ENST00000518607 XDHP47989 1333 aa28.26■■■□□ 2.11
EFCAB2-214ENST00000518607 ECE2O60344 883 aa28.26■■■□□ 2.11
EFCAB2-214ENST00000518607 ZC3H12CQ9C0D7 883 aaKnown RBP28.26■■■□□ 2.11
EFCAB2-214ENST00000518607 GREM2Q9H772 168 aa28.26■■■□□ 2.11
EFCAB2-214ENST00000518607 MKRN1Q9UHC7 482 aaKnown RBP28.26■■■□□ 2.11
EFCAB2-214ENST00000518607 TRPM7Q96QT4 1865 aa28.25■■■□□ 2.11
EFCAB2-214ENST00000518607 GPR101Q96P66 508 aaPredicted RBP28.25■■■□□ 2.11
EFCAB2-214ENST00000518607 PLA2G12BQ9BX93 195 aa28.25■■■□□ 2.11
EFCAB2-214ENST00000518607 SCN9AQ15858 1988 aa28.24■■■□□ 2.11
EFCAB2-214ENST00000518607 PSMD14O00487 310 aa28.24■■■□□ 2.11
EFCAB2-214ENST00000518607 DOK7Q18PE1 504 aa28.23■■■□□ 2.11
EFCAB2-214ENST00000518607 BSDC1Q9NW68 430 aaPredicted RBP28.23■■■□□ 2.11
EFCAB2-214ENST00000518607 PSME4Q14997 1843 aa28.22■■■□□ 2.11
EFCAB2-214ENST00000518607 G3V3G9 751 aa28.22■■■□□ 2.11
EFCAB2-214ENST00000518607 DCAF8Q5TAQ9 597 aa28.22■■■□□ 2.11
EFCAB2-214ENST00000518607 DPF2Q92785 391 aa28.22■■■□□ 2.11
EFCAB2-214ENST00000518607 CNOT7Q9UIV1 285 aaKnown RBP28.22■■■□□ 2.11
EFCAB2-214ENST00000518607 H7C1D1 291 aa28.21■■■□□ 2.11
EFCAB2-214ENST00000518607 ATP2B4P23634 1241 aa28.21■■■□□ 2.11
EFCAB2-214ENST00000518607 RPS12P25398 132 aaKnown RBP28.21■■■□□ 2.11
EFCAB2-214ENST00000518607 CASP7P55210 303 aa28.21■■■□□ 2.11
EFCAB2-214ENST00000518607 MICALL2Q8IY33 904 aa28.21■■■□□ 2.11
EFCAB2-214ENST00000518607 F6X3S4 739 aa28.2■■■□□ 2.1
EFCAB2-214ENST00000518607 IGHMBP2P38935 993 aaKnown RBP28.2■■■□□ 2.1
EFCAB2-214ENST00000518607 ZBTB12Q9Y330 459 aaPredicted RBP28.2■■■□□ 2.1
EFCAB2-214ENST00000518607 ZC3H15Q8WU90 426 aaKnown RBP28.19■■■□□ 2.1
EFCAB2-214ENST00000518607 FAM161AQ3B820 660 aa28.18■■■□□ 2.1
EFCAB2-214ENST00000518607 BEND3Q5T5X7 828 aa28.18■■■□□ 2.1
EFCAB2-214ENST00000518607 TRPM4Q8TD43 1214 aa28.18■■■□□ 2.1
EFCAB2-214ENST00000518607 MINPP1Q9UNW1 487 aa28.18■■■□□ 2.1
EFCAB2-214ENST00000518607 MED23Q9ULK4 1368 aa28.17■■■□□ 2.1
EFCAB2-214ENST00000518607 HSPA1AP0DMV8 641 aaKnown RBP28.17■■■□□ 2.1
EFCAB2-214ENST00000518607 HSPA1BP0DMV9 641 aaKnown RBP28.17■■■□□ 2.1
EFCAB2-214ENST00000518607 ITGA6P23229 1130 aa28.17■■■□□ 2.1
EFCAB2-214ENST00000518607 ABT1Q9ULW3 272 aaKnown RBP28.17■■■□□ 2.1
EFCAB2-214ENST00000518607 ZNF609O15014 1411 aa28.17■■■□□ 2.1
EFCAB2-214ENST00000518607 SHTN1A0MZ66 631 aa28.16■■■□□ 2.1
EFCAB2-214ENST00000518607 RASSF10A6NK89 507 aa28.16■■■□□ 2.1
EFCAB2-214ENST00000518607 E9PSI1 815 aa28.16■■■□□ 2.1
EFCAB2-214ENST00000518607 KCNQ5Q9NR82 932 aa28.16■■■□□ 2.1
EFCAB2-214ENST00000518607 PGAP2Q9UHJ9 254 aa28.16■■■□□ 2.1
EFCAB2-214ENST00000518607 TRAF5O00463 557 aa28.15■■■□□ 2.1
EFCAB2-214ENST00000518607 CSF1RP07333 972 aa28.15■■■□□ 2.1
EFCAB2-214ENST00000518607 HIRAP54198 1017 aaPredicted RBP28.15■■■□□ 2.1
EFCAB2-214ENST00000518607 VIL1P09327 827 aaKnown RBP28.14■■■□□ 2.1
EFCAB2-214ENST00000518607 MPHOSPH8Q99549 860 aa28.14■■■□□ 2.1
EFCAB2-214ENST00000518607 VEGFBP49765 207 aa28.13■■■□□ 2.09
EFCAB2-214ENST00000518607 CCT4P50991 539 aaKnown RBP28.13■■■□□ 2.09
EFCAB2-214ENST00000518607 IFFO2Q5TF58 517 aa28.13■■■□□ 2.09
EFCAB2-214ENST00000518607 FMR1Q06787 632 aaKnown RBP eCLIP28.12■■■□□ 2.09
EFCAB2-214ENST00000518607 DEFB115Q30KQ5 88 aa28.12■■■□□ 2.09
EFCAB2-214ENST00000518607 SAMD7Q7Z3H4 446 aa28.12■■■□□ 2.09
EFCAB2-214ENST00000518607 PODNQ7Z5L7 613 aa28.12■■■□□ 2.09
EFCAB2-214ENST00000518607 GLIS2Q9BZE0 524 aaPredicted RBP28.12■■■□□ 2.09
EFCAB2-214ENST00000518607 ANKRD18BA2A2Z9 1011 aa28.11■■■□□ 2.09
EFCAB2-214ENST00000518607 GRM8O00222 908 aa28.11■■■□□ 2.09
EFCAB2-214ENST00000518607 ALDH1L1O75891 902 aa28.11■■■□□ 2.09
EFCAB2-214ENST00000518607 CDC37L1Q7L3B6 337 aa28.11■■■□□ 2.09
EFCAB2-214ENST00000518607 ANKRD2Q9GZV1 360 aa28.11■■■□□ 2.09
EFCAB2-214ENST00000518607 A0A1B0GUL6 1792 aa28.11■■■□□ 2.09
EFCAB2-214ENST00000518607 TBC1D10BQ4KMP7 808 aaPredicted RBP28.1■■■□□ 2.09
EFCAB2-214ENST00000518607 SLC4A10Q6U841 1118 aa28.1■■■□□ 2.09
EFCAB2-214ENST00000518607 LEMD3Q9Y2U8 911 aa28.1■■■□□ 2.09
EFCAB2-214ENST00000518607 CCER2I3L3R5 266 aa28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 IFIT5Q13325 482 aaKnown RBP28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 CST9Q5W186 159 aa28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 RSBN1LQ6PCB5 846 aaPredicted RBP28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 AGBL3Q8NEM8 1001 aa28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 SRCIN1Q9C0H9 1055 aa28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 C9orf78Q9NZ63 289 aaPredicted RBP28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 CHMP3Q9Y3E7 222 aa28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 THSD7BQ9C0I4 1608 aa28.09■■■□□ 2.09
EFCAB2-214ENST00000518607 CELF2O95319 508 aaKnown RBP28.08■■■□□ 2.09
EFCAB2-214ENST00000518607 FOXO4P98177 505 aa28.08■■■□□ 2.09
EFCAB2-214ENST00000518607 KIF4BQ2VIQ3 1234 aa28.08■■■□□ 2.09
EFCAB2-214ENST00000518607 ZNF646O15015 1829 aaPredicted RBP28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 USP17L3A6NCW0 530 aa28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 USP17L4A6NCW7 530 aa28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 EGFRP00533 1210 aa28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 USP17L1Q7RTZ2 530 aa28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 TLL2Q9Y6L7 1015 aa28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 ZNF804BA4D1E1 1349 aa28.07■■■□□ 2.08
EFCAB2-214ENST00000518607 WTIPA6NIX2 430 aaPredicted RBP28.06■■■□□ 2.08
EFCAB2-214ENST00000518607 CHRNDQ07001 517 aa28.06■■■□□ 2.08
EFCAB2-214ENST00000518607 SLFN5Q08AF3 891 aa28.06■■■□□ 2.08
EFCAB2-214ENST00000518607 COA1Q9GZY4 146 aa28.06■■■□□ 2.08
EFCAB2-214ENST00000518607 PTPRCP08575 1304 aa28.06■■■□□ 2.08
EFCAB2-214ENST00000518607 POLR2AP24928 1970 aaKnown RBP28.06■■■□□ 2.08
EFCAB2-214ENST00000518607 KCNJ4P48050 445 aa28.05■■■□□ 2.08
EFCAB2-214ENST00000518607 RBM26Q5T8P6 1007 aaKnown RBP28.05■■■□□ 2.08
EFCAB2-214ENST00000518607 PAXIP1Q6ZW49 1069 aaPredicted RBP28.05■■■□□ 2.08
EFCAB2-214ENST00000518607 MRPL50Q8N5N7 158 aaKnown RBP28.05■■■□□ 2.08
EFCAB2-214ENST00000518607 WDR33Q9C0J8 1336 aaKnown RBP28.05■■■□□ 2.08
EFCAB2-214ENST00000518607 ECE1P42892 770 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms